PMC:3062687 / 330-438
Annnotations
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T243 | 34-38 | O14920 | denotes | IKKβ |
| T244 | 92-96 | P23396 | denotes | RPS3 |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T148 | 0-2 | VB | denotes | is |
| T149 | 3-12 | VB | denotes | regulated |
| T150 | 14-18 | RB | denotes | Here |
| T151 | 19-21 | PRP | denotes | we |
| T152 | 22-28 | VB | denotes | report |
| T153 | 29-33 | IN | denotes | that |
| T154 | 34-38 | NN | denotes | IKKβ |
| T155 | 39-54 | NN | denotes | phosphorylation |
| T156 | 55-57 | IN | denotes | of |
| T157 | 58-64 | NN | denotes | serine |
| T158 | 65-68 | CD | denotes | 209 |
| T159 | 69-70 | -LRB- | denotes | ( |
| T160 | 70-74 | NN | denotes | S209 |
| T161 | 74-75 | -RRB- | denotes | ) |
| T162 | 76-79 | VB | denotes | was |
| T163 | 80-87 | JJ | denotes | crucial |
| T164 | 88-91 | IN | denotes | for |
| T165 | 92-96 | NN | denotes | RPS3 |
| T166 | 97-104 | JJ | denotes | nuclear |
| R126 | T149 | T148 | arg2Of | regulated,is |
| R127 | T151 | T152 | arg1Of | we,report |
| R128 | T152 | T150 | arg1Of | report,Here |
| R129 | T155 | T154 | arg1Of | phosphorylation,IKKβ |
| R130 | T155 | T156 | arg1Of | phosphorylation,of |
| R131 | T155 | T162 | arg1Of | phosphorylation,was |
| R132 | T155 | T163 | arg1Of | phosphorylation,crucial |
| R133 | T157 | T156 | arg2Of | serine,of |
| R134 | T157 | T158 | arg1Of | serine,209 |
| R135 | T157 | T159 | arg1Of | serine,( |
| R136 | T160 | T159 | arg2Of | S209,( |
| R137 | T161 | T159 | arg3Of | ),( |
| R138 | T162 | T152 | arg2Of | was,report |
| R139 | T162 | T153 | arg1Of | was,that |
| R141 | T163 | T162 | arg2Of | crucial,was |
| R142 | T163 | T164 | arg1Of | crucial,for |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T299 | 0-2 | VBZ | denotes | is |
| T300 | 3-12 | VBN | denotes | regulated |
| T301 | 12-13 | . | denotes | . |
| T302 | 14-18 | RB | denotes | Here |
| T303 | 19-21 | PRP | denotes | we |
| T304 | 22-28 | VBP | denotes | report |
| T305 | 29-33 | IN | denotes | that |
| T306 | 34-38 | NNP | denotes | IKKβ |
| T307 | 39-54 | NN | denotes | phosphorylation |
| T308 | 55-57 | IN | denotes | of |
| T309 | 58-64 | NN | denotes | serine |
| T310 | 65-68 | CD | denotes | 209 |
| T311 | 69-70 | -LRB- | denotes | ( |
| T312 | 70-74 | CD | denotes | S209 |
| T313 | 74-75 | -RRB- | denotes | ) |
| T314 | 76-79 | VBD | denotes | was |
| T315 | 80-87 | JJ | denotes | crucial |
| T316 | 88-91 | IN | denotes | for |
| T317 | 92-96 | JJ | denotes | RPS3 |
| T318 | 97-104 | JJ | denotes | nuclear |
| R233 | T299 | T300 | auxpass | is,regulated |
| R236 | T302 | T304 | advmod | Here,report |
| R237 | T303 | T304 | nsubj | we,report |
| R238 | T304 | T304 | ROOT | report,report |
| R239 | T305 | T314 | mark | that,was |
| R240 | T306 | T307 | compound | IKKβ,phosphorylation |
| R241 | T307 | T314 | nsubj | phosphorylation,was |
| R242 | T308 | T307 | prep | of,phosphorylation |
| R243 | T309 | T308 | pobj | serine,of |
| R244 | T310 | T309 | nummod | 209,serine |
| R245 | T311 | T309 | punct | (,serine |
| R246 | T312 | T309 | appos | S209,serine |
| R247 | T313 | T309 | punct | ),serine |
| R248 | T314 | T304 | ccomp | was,report |
| R249 | T315 | T314 | acomp | crucial,was |
| R250 | T316 | T315 | prep | for,crucial |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T433 | 39-54 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T573 | 3-12 | Regulation | denotes | regulated | true |
| T574 | 34-38 | Protein | denotes | IKKβ | |
| T575 | 39-54 | Phosphorylation | denotes | phosphorylation | |
| T576 | 58-68 | Entity | denotes | serine 209 | |
| T577 | 80-87 | Positive_regulation | denotes | crucial | |
| T578 | 92-96 | Protein | denotes | RPS3 | |
| T579 | 97-104 | Entity | denotes | nuclear | |
| R448 | T575 | T577 | causeOf | phosphorylation,crucial | |
| R449 | T576 | T575 | themeOf | serine 209,phosphorylation | |
| R450 | T576 | T574 | partOf | serine 209,IKKβ |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T513 | 3-12 | Regulation | denotes | regulated |
| T514 | 34-38 | Protein | denotes | IKKβ |
| T515 | 92-96 | Protein | denotes | RPS3 |
| T516 | 39-54 | Phosphorylation | denotes | phosphorylation |
| T517 | 97-104 | Entity | denotes | nuclear |
| T519 | 80-87 | Positive_regulation | denotes | crucial |
| R403 | T514 | T516 | themeOf | IKKβ,phosphorylation |
| R405 | T516 | T519 | causeOf | phosphorylation,crucial |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue | Speculation |
|---|---|---|---|---|---|
| T73 | 3-12 | Regulation | denotes | regulated | true |
| T74 | 34-38 | Protein | denotes | IKKβ | |
| T75 | 39-54 | Phosphorylation | denotes | phosphorylation | |
| T76 | 58-68 | Entity | denotes | serine 209 | |
| T77 | 80-87 | Positive_regulation | denotes | crucial | |
| T78 | 92-96 | Protein | denotes | RPS3 | |
| T79 | 97-104 | Entity | denotes | nuclear | |
| R60 | T75 | T77 | causeOf | phosphorylation,crucial | |
| R61 | T76 | T75 | themeOf | serine 209,phosphorylation | |
| R62 | T76 | T74 | partOf | serine 209,IKKβ |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T44 | 3-12 | Regulation | denotes | regulated |
| T45 | 34-38 | Protein | denotes | IKKβ |
| T46 | 39-54 | Phosphorylation | denotes | phosphorylation |
| T47 | 58-68 | Entity | denotes | serine 209 |
| T48 | 80-87 | Positive_regulation | denotes | crucial |
| T49 | 92-96 | Protein | denotes | RPS3 |
| T50 | 97-104 | Entity | denotes | nuclear |
| R37 | T46 | T48 | causeOf | phosphorylation,crucial |
| R38 | T47 | T46 | themeOf | serine 209,phosphorylation |
| R39 | T47 | T45 | partOf | serine 209,IKKβ |