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PMC:3062687 / 26924-27159 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T18815 13-18 P23396 denotes NleH1
T18816 40-43 P21579 denotes p65
T18817 40-43 Q04206 denotes p65
T18818 95-98 Q04206 denotes p65
T18819 95-98 P21579 denotes p65
T18820 113-117 P23396 denotes RPS3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T18585 0-2 IN denotes In
T18586 3-11 NN denotes contrast
T18587 11-12 -COMMA- denotes ,
T18588 13-18 NN denotes NleH1
T18589 19-23 VB denotes does
T18590 24-27 RB denotes not
T18591 28-33 VB denotes block
T18592 34-39 NN denotes NF-κB
T18593 40-43 NN denotes p65
T18594 44-51 JJ denotes nuclear
T18595 52-65 NN denotes translocation
T18596 65-66 -COMMA- denotes ,
T18597 67-72 WDT denotes which
T18598 73-81 VB denotes suggests
T18599 82-86 IN denotes that
T18600 87-94 JJ denotes certain
T18601 95-108 JJ denotes p65-dependent
T18602 109-112 CC denotes but
T18603 113-129 JJ denotes RPS3-independent
T18604 130-135 NN denotes NF-κB
T18605 136-142 NN denotes target
T18606 143-148 NN denotes genes
T18607 149-154 MD denotes might
T18608 155-159 RB denotes thus
T18609 160-162 VB denotes be
T18610 163-173 JJ denotes beneficial
T18611 174-177 IN denotes for
T18612 178-180 FW denotes E.
T18613 181-185 FW denotes coli
T18614 186-190 NN denotes O157
T18615 190-191 -COLON- denotes :
T18616 191-193 NN denotes H7
T18617 194-196 TO denotes to
T18618 197-206 VB denotes replicate
T18619 207-210 CC denotes and
T18620 211-222 VB denotes disseminate
T18621 223-225 IN denotes in
T18622 226-229 DT denotes the
T18623 230-234 NN denotes host
R14851 T18586 T18585 arg2Of contrast,In
R14852 T18588 T18589 arg1Of NleH1,does
R14853 T18588 T18591 arg1Of NleH1,block
R14854 T18591 T18585 arg1Of block,In
R14855 T18591 T18587 arg1Of block,","
R14856 T18591 T18589 arg2Of block,does
R14857 T18591 T18590 arg1Of block,not
R14858 T18595 T18591 arg2Of translocation,block
R14859 T18595 T18592 arg1Of translocation,NF-κB
R14860 T18595 T18593 arg1Of translocation,p65
R14861 T18595 T18594 arg1Of translocation,nuclear
R14862 T18595 T18596 arg1Of translocation,","
R14863 T18595 T18597 arg1Of translocation,which
R14864 T18595 T18598 arg1Of translocation,suggests
R14865 T18601 T18602 arg1Of p65-dependent,but
R14866 T18603 T18602 arg2Of RPS3-independent,but
R14867 T18606 T18600 arg1Of genes,certain
R14868 T18606 T18601 arg1Of genes,p65-dependent
R14869 T18606 T18603 arg1Of genes,RPS3-independent
R14870 T18606 T18604 arg1Of genes,NF-κB
R14871 T18606 T18605 arg1Of genes,target
R14872 T18606 T18607 arg1Of genes,might
R14873 T18606 T18609 arg1Of genes,be
R14874 T18606 T18610 arg1Of genes,beneficial
R14875 T18609 T18598 arg2Of be,suggests
R14876 T18609 T18599 arg1Of be,that
R14877 T18609 T18607 arg2Of be,might
R14878 T18609 T18608 arg1Of be,thus
R14879 T18610 T18609 arg2Of beneficial,be
R14880 T18610 T18611 arg1Of beneficial,for
R14881 T18614 T18611 arg2Of O157,for
R14882 T18614 T18612 arg1Of O157,E.
R14883 T18614 T18613 arg1Of O157,coli
R14884 T18614 T18615 arg1Of O157,:
R14885 T18614 T18617 modOf O157,to
R14886 T18616 T18618 arg2Of H7,replicate
R14887 T18616 T18620 arg2Of H7,disseminate
R14888 T18618 T18619 arg1Of replicate,and
R14889 T18619 T18617 arg1Of and,to
R14890 T18619 T18621 arg1Of and,in
R14891 T18620 T18619 arg2Of disseminate,and
R14892 T18623 T18621 arg2Of host,in
R14893 T18623 T18622 arg1Of host,the

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T19284 0-2 IN denotes In
T19285 3-11 NN denotes contrast
T19286 11-12 , denotes ,
T19287 13-18 NNP denotes NleH1
T19288 19-23 VBZ denotes does
T19289 24-27 RB denotes not
T19290 28-33 VB denotes block
T19291 34-39 NNP denotes NF-κB
T19292 40-43 CD denotes p65
T19293 44-51 JJ denotes nuclear
T19294 52-65 NN denotes translocation
T19295 65-66 , denotes ,
T19296 67-72 WDT denotes which
T19297 73-81 VBZ denotes suggests
T19298 82-86 IN denotes that
T19299 87-94 JJ denotes certain
T19300 95-108 JJ denotes p65-dependent
T19301 109-112 CC denotes but
T19302 113-129 JJ denotes RPS3-independent
T19303 130-135 NN denotes NF-κB
T19304 136-142 NN denotes target
T19305 143-148 NNS denotes genes
T19306 149-154 MD denotes might
T19307 155-159 RB denotes thus
T19308 160-162 VB denotes be
T19309 163-173 JJ denotes beneficial
T19310 174-177 IN denotes for
T19311 178-180 NNP denotes E.
T19312 181-185 NNS denotes coli
T19313 186-190 NNP denotes O157
T19314 190-191 : denotes :
T19315 191-193 NNP denotes H7
T19316 194-196 TO denotes to
T19317 197-206 VB denotes replicate
T19318 207-210 CC denotes and
T19319 211-222 VB denotes disseminate
T19320 223-225 IN denotes in
T19321 226-229 DT denotes the
T19322 230-234 NN denotes host
T19323 234-235 . denotes .
R15507 T19284 T19290 prep In,block
R15508 T19285 T19284 pobj contrast,In
R15509 T19286 T19290 punct ",",block
R15510 T19287 T19290 nsubj NleH1,block
R15511 T19288 T19290 aux does,block
R15512 T19289 T19290 neg not,block
R15513 T19290 T19290 ROOT block,block
R15514 T19291 T19294 nmod NF-κB,translocation
R15515 T19292 T19291 nummod p65,NF-κB
R15516 T19293 T19294 amod nuclear,translocation
R15517 T19294 T19290 dobj translocation,block
R15518 T19295 T19294 punct ",",translocation
R15519 T19296 T19297 nsubj which,suggests
R15520 T19297 T19294 relcl suggests,translocation
R15521 T19298 T19308 mark that,be
R15522 T19299 T19305 amod certain,genes
R15523 T19300 T19304 nmod p65-dependent,target
R15524 T19301 T19300 cc but,p65-dependent
R15525 T19302 T19300 conj RPS3-independent,p65-dependent
R15526 T19303 T19304 compound NF-κB,target
R15527 T19304 T19305 compound target,genes
R15528 T19305 T19308 nsubj genes,be
R15529 T19306 T19308 aux might,be
R15530 T19307 T19308 advmod thus,be
R15531 T19308 T19297 ccomp be,suggests
R15532 T19309 T19308 acomp beneficial,be
R15533 T19310 T19309 prep for,beneficial
R15534 T19311 T19313 compound E.,O157
R15535 T19312 T19313 compound coli,O157
R15536 T19313 T19310 pobj O157,for
R15537 T19314 T19294 punct :,translocation
R15538 T19315 T19294 appos H7,translocation
R15539 T19316 T19317 aux to,replicate
R15540 T19317 T19290 advcl replicate,block
R15541 T19318 T19317 cc and,replicate
R15542 T19319 T19317 conj disseminate,replicate
R15543 T19320 T19319 prep in,disseminate
R15544 T19321 T19322 det the,host
R15545 T19322 T19320 pobj host,in
R15546 T19323 T19290 punct .,block

GO-CC

Id Subject Object Predicate Lexical cue
T19634 230-234 http://purl.obolibrary.org/obo/GO_0018995 denotes host

sentences

Id Subject Object Predicate Lexical cue
T18140 0-235 Sentence denotes In contrast, NleH1 does not block NF-κB p65 nuclear translocation, which suggests that certain p65-dependent but RPS3-independent NF-κB target genes might thus be beneficial for E. coli O157:H7 to replicate and disseminate in the host.
T183 0-235 Sentence denotes In contrast, NleH1 does not block NF-κB p65 nuclear translocation, which suggests that certain p65-dependent but RPS3-independent NF-κB target genes might thus be beneficial for E. coli O157:H7 to replicate and disseminate in the host.

events-check-again

Id Subject Object Predicate Lexical cue Negation
T20092 13-18 Protein denotes NleH1
T20093 28-33 Negative_regulation denotes block true
T20094 40-43 Protein denotes p65
T20095 44-51 Entity denotes nuclear
T20096 52-65 Localization denotes translocation
T20097 95-98 Protein denotes p65
T20098 113-117 Protein denotes RPS3
R16041 T20092 T20093 causeOf NleH1,block
R16042 T20094 T20096 themeOf p65,translocation
R16043 T20095 T20096 locationOf nuclear,translocation
R16044 T20096 T20093 themeOf translocation,block

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T19744 13-18 Protein denotes NleH1
T19745 34-39 Protein denotes NF-κB
T19746 40-43 Protein denotes p65
T19747 113-117 Protein denotes RPS3
T19748 130-135 Protein denotes NF-κB
T19749 44-51 Entity denotes nuclear
T19750 52-65 Localization denotes translocation
T19751 52-65 Localization denotes translocation
T19752 28-33 Negative_regulation denotes block
T19753 28-33 Negative_regulation denotes block
R15818 T19744 T19752 causeOf NleH1,block
R15819 T19744 T19753 causeOf NleH1,block
R15820 T19745 T19750 themeOf NF-κB,translocation
R15821 T19746 T19751 themeOf p65,translocation
R15822 T19749 T19750 locationOf nuclear,translocation
R15823 T19749 T19751 locationOf nuclear,translocation
R15824 T19750 T19752 themeOf translocation,block
R15825 T19751 T19753 themeOf translocation,block

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T18104 13-18 Protein denotes NleH1
T18105 28-33 Negative_regulation denotes block true
T18106 40-43 Protein denotes p65
T18107 44-51 Entity denotes nuclear
T18108 52-65 Localization denotes translocation
T18109 95-98 Protein denotes p65
T18110 113-117 Protein denotes RPS3
R14395 T18104 T18105 causeOf NleH1,block
R14396 T18106 T18108 themeOf p65,translocation
R14397 T18107 T18108 locationOf nuclear,translocation
R14398 T18108 T18105 themeOf translocation,block

test2

Id Subject Object Predicate Lexical cue
T18017 13-18 Protein denotes NleH1
T18018 28-33 Negative_regulation denotes block
T18019 40-43 Protein denotes p65
T18020 44-51 Entity denotes nuclear
T18021 52-65 Localization denotes translocation
T18022 95-98 Protein denotes p65
T18023 99-108 Regulation denotes dependent
T18024 113-117 Protein denotes RPS3
R14336 T18017 T18018 causeOf NleH1,block
R14337 T18019 T18021 themeOf p65,translocation
R14338 T18020 T18021 locationOf nuclear,translocation
R14339 T18021 T18018 themeOf translocation,block