PMC:3062687 / 2335-2492 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1152","span":{"begin":18,"end":22},"obj":"P23396"},{"id":"T1153","span":{"begin":152,"end":156},"obj":"P23396"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T1011","span":{"begin":3,"end":10},"obj":"IN"},{"id":"T1012","span":{"begin":11,"end":13},"obj":"CC"},{"id":"T1013","span":{"begin":14,"end":17},"obj":"RB"},{"id":"T1014","span":{"begin":18,"end":22},"obj":"NN"},{"id":"T1015","span":{"begin":23,"end":25},"obj":"VB"},{"id":"T1016","span":{"begin":26,"end":40},"obj":"VB"},{"id":"T1017","span":{"begin":41,"end":44},"obj":"VB"},{"id":"T1018","span":{"begin":45,"end":49},"obj":"VB"},{"id":"T1019","span":{"begin":50,"end":68},"obj":"JJ"},{"id":"T1020","span":{"begin":70,"end":75},"obj":"IN"},{"id":"T1021","span":{"begin":76,"end":82},"obj":"NN"},{"id":"T1022","span":{"begin":83,"end":91},"obj":"NN"},{"id":"T1023","span":{"begin":92,"end":96},"obj":"VB"},{"id":"T1024","span":{"begin":97,"end":98},"obj":"DT"},{"id":"T1025","span":{"begin":99,"end":107},"obj":"JJ"},{"id":"T1026","span":{"begin":108,"end":112},"obj":"NN"},{"id":"T1027","span":{"begin":113,"end":115},"obj":"IN"},{"id":"T1028","span":{"begin":116,"end":121},"obj":"NN"},{"id":"T1029","span":{"begin":122,"end":132},"obj":"NN"},{"id":"T1030","span":{"begin":132,"end":133},"obj":"-COMMA-"},{"id":"T1031","span":{"begin":134,"end":136},"obj":"PRP"},{"id":"T1032","span":{"begin":137,"end":143},"obj":"VB"},{"id":"T1033","span":{"begin":144,"end":151},"obj":"IN"},{"id":"T1034","span":{"begin":152,"end":156},"obj":"NN"}],"relations":[{"id":"R840","pred":"arg1Of","subj":"T1014","obj":"T1012"},{"id":"R841","pred":"arg1Of","subj":"T1014","obj":"T1013"},{"id":"R842","pred":"arg1Of","subj":"T1014","obj":"T1015"},{"id":"R843","pred":"arg2Of","subj":"T1014","obj":"T1016"},{"id":"R844","pred":"arg1Of","subj":"T1016","obj":"T1011"},{"id":"R845","pred":"arg2Of","subj":"T1016","obj":"T1015"},{"id":"R846","pred":"arg1Of","subj":"T1016","obj":"T1017"},{"id":"R847","pred":"arg1Of","subj":"T1016","obj":"T1018"},{"id":"R848","pred":"arg1Of","subj":"T1016","obj":"T1019"},{"id":"R849","pred":"arg2Of","subj":"T1018","obj":"T1017"},{"id":"R850","pred":"arg2Of","subj":"T1019","obj":"T1018"},{"id":"R851","pred":"arg1Of","subj":"T1022","obj":"T1021"},{"id":"R852","pred":"arg1Of","subj":"T1022","obj":"T1023"},{"id":"R853","pred":"arg2Of","subj":"T1023","obj":"T1020"},{"id":"R854","pred":"arg1Of","subj":"T1023","obj":"T1027"},{"id":"R855","pred":"arg2Of","subj":"T1026","obj":"T1023"},{"id":"R856","pred":"arg1Of","subj":"T1026","obj":"T1024"},{"id":"R857","pred":"arg1Of","subj":"T1026","obj":"T1025"},{"id":"R858","pred":"arg2Of","subj":"T1029","obj":"T1027"},{"id":"R859","pred":"arg1Of","subj":"T1029","obj":"T1028"},{"id":"R860","pred":"arg1Of","subj":"T1031","obj":"T1032"},{"id":"R861","pred":"arg1Of","subj":"T1032","obj":"T1020"},{"id":"R862","pred":"arg1Of","subj":"T1032","obj":"T1030"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1390","span":{"begin":1,"end":2},"obj":"."},{"id":"T1391","span":{"begin":3,"end":10},"obj":"IN"},{"id":"T1392","span":{"begin":11,"end":13},"obj":"CC"},{"id":"T1393","span":{"begin":14,"end":17},"obj":"RB"},{"id":"T1394","span":{"begin":18,"end":22},"obj":"NNP"},{"id":"T1395","span":{"begin":23,"end":25},"obj":"VBZ"},{"id":"T1396","span":{"begin":26,"end":40},"obj":"VBN"},{"id":"T1397","span":{"begin":41,"end":44},"obj":"VBD"},{"id":"T1398","span":{"begin":45,"end":49},"obj":"VBN"},{"id":"T1399","span":{"begin":50,"end":68},"obj":"JJ"},{"id":"T1400","span":{"begin":68,"end":69},"obj":"."},{"id":"T1401","span":{"begin":70,"end":75},"obj":"IN"},{"id":"T1402","span":{"begin":76,"end":82},"obj":"NN"},{"id":"T1403","span":{"begin":83,"end":91},"obj":"NNS"},{"id":"T1404","span":{"begin":92,"end":96},"obj":"VBP"},{"id":"T1405","span":{"begin":97,"end":98},"obj":"DT"},{"id":"T1406","span":{"begin":99,"end":107},"obj":"JJ"},{"id":"T1407","span":{"begin":108,"end":112},"obj":"NN"},{"id":"T1408","span":{"begin":113,"end":115},"obj":"IN"},{"id":"T1409","span":{"begin":116,"end":121},"obj":"JJ"},{"id":"T1410","span":{"begin":122,"end":132},"obj":"NN"},{"id":"T1411","span":{"begin":132,"end":133},"obj":","},{"id":"T1412","span":{"begin":134,"end":136},"obj":"PRP"},{"id":"T1413","span":{"begin":137,"end":143},"obj":"VBD"},{"id":"T1414","span":{"begin":144,"end":151},"obj":"IN"},{"id":"T1415","span":{"begin":152,"end":156},"obj":"NNP"}],"relations":[{"id":"R1193","pred":"mark","subj":"T1391","obj":"T1395"},{"id":"R1194","pred":"cc","subj":"T1392","obj":"T1395"},{"id":"R1195","pred":"neg","subj":"T1393","obj":"T1395"},{"id":"R1196","pred":"nsubj","subj":"T1394","obj":"T1395"},{"id":"R1197","pred":"ROOT","subj":"T1395","obj":"T1395"},{"id":"R1198","pred":"nsubjpass","subj":"T1396","obj":"T1399"},{"id":"R1199","pred":"aux","subj":"T1397","obj":"T1398"},{"id":"R1200","pred":"auxpass","subj":"T1398","obj":"T1399"},{"id":"R1201","pred":"attr","subj":"T1399","obj":"T1395"},{"id":"R1202","pred":"punct","subj":"T1400","obj":"T1395"},{"id":"R1203","pred":"mark","subj":"T1401","obj":"T1404"},{"id":"R1204","pred":"compound","subj":"T1402","obj":"T1403"},{"id":"R1205","pred":"nsubj","subj":"T1403","obj":"T1404"},{"id":"R1206","pred":"advcl","subj":"T1404","obj":"T1413"},{"id":"R1207","pred":"det","subj":"T1405","obj":"T1407"},{"id":"R1208","pred":"amod","subj":"T1406","obj":"T1407"},{"id":"R1209","pred":"dobj","subj":"T1407","obj":"T1404"},{"id":"R1210","pred":"prep","subj":"T1408","obj":"T1407"},{"id":"R1211","pred":"amod","subj":"T1409","obj":"T1410"},{"id":"R1212","pred":"pobj","subj":"T1410","obj":"T1408"},{"id":"R1213","pred":"punct","subj":"T1411","obj":"T1413"},{"id":"R1214","pred":"nsubj","subj":"T1412","obj":"T1413"},{"id":"R1215","pred":"ROOT","subj":"T1413","obj":"T1413"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T1587","span":{"begin":122,"end":132},"obj":"http://purl.obolibrary.org/obo/GO_0065007"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    sentences

    {"project":"sentences","denotations":[{"id":"T788","span":{"begin":3,"end":69},"obj":"Sentence"},{"id":"T18","span":{"begin":3,"end":69},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T1861","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T1862","span":{"begin":26,"end":40},"obj":"Phosphorylation"},{"id":"T1863","span":{"begin":152,"end":156},"obj":"Protein"}],"relations":[{"id":"R1485","pred":"themeOf","subj":"T1861","obj":"T1862"}],"attributes":[{"id":"M33","pred":"Speculation","subj":"T1862","obj":"true"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T1653","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T1654","span":{"begin":26,"end":40},"obj":"Phosphorylation"},{"id":"T1655","span":{"begin":116,"end":121},"obj":"Protein"},{"id":"T1656","span":{"begin":152,"end":156},"obj":"Protein"},{"id":"T1658","span":{"begin":122,"end":132},"obj":"Regulation"}],"relations":[{"id":"R1391","pred":"themeOf","subj":"T1653","obj":"T1654"},{"id":"R1392","pred":"themeOf","subj":"T1655","obj":"T1658"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T756","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T757","span":{"begin":26,"end":40},"obj":"Phosphorylation"},{"id":"T758","span":{"begin":152,"end":156},"obj":"Protein"}],"relations":[{"id":"R608","pred":"themeOf","subj":"T756","obj":"T757"}],"attributes":[{"id":"M19","pred":"Speculation","subj":"T757","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}

    test2

    {"project":"test2","denotations":[{"id":"T704","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T705","span":{"begin":26,"end":40},"obj":"Phosphorylation"},{"id":"T706","span":{"begin":152,"end":156},"obj":"Protein"}],"relations":[{"id":"R576","pred":"themeOf","subj":"T704","obj":"T705"}],"text":"3. Whether or not RPS3 is phosphorylated had been controversial14-18. Since kinase cascades play a critical role in NF-κB regulation, we tested whether RPS3 "}