PMC:3062687 / 213-394 JSONTXT

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    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T242","span":{"begin":90,"end":94},"obj":"P23396"},{"id":"T243","span":{"begin":151,"end":155},"obj":"O14920"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T130","span":{"begin":1,"end":3},"obj":"VB"},{"id":"T131","span":{"begin":4,"end":6},"obj":"DT"},{"id":"T132","span":{"begin":7,"end":12},"obj":"NN"},{"id":"T133","span":{"begin":13,"end":20},"obj":"NN"},{"id":"T134","span":{"begin":21,"end":25},"obj":"WDT"},{"id":"T135","span":{"begin":26,"end":33},"obj":"VB"},{"id":"T136","span":{"begin":34,"end":42},"obj":"JJ"},{"id":"T137","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T138","span":{"begin":48,"end":61},"obj":"NN"},{"id":"T139","span":{"begin":63,"end":70},"obj":"RB"},{"id":"T140","span":{"begin":70,"end":71},"obj":"-COMMA-"},{"id":"T141","span":{"begin":72,"end":74},"obj":"PRP"},{"id":"T142","span":{"begin":75,"end":77},"obj":"VB"},{"id":"T143","span":{"begin":78,"end":85},"obj":"JJ"},{"id":"T144","span":{"begin":86,"end":89},"obj":"WRB"},{"id":"T145","span":{"begin":90,"end":94},"obj":"NN"},{"id":"T146","span":{"begin":95,"end":102},"obj":"JJ"},{"id":"T147","span":{"begin":103,"end":116},"obj":"NN"},{"id":"T148","span":{"begin":117,"end":119},"obj":"VB"},{"id":"T149","span":{"begin":120,"end":129},"obj":"VB"},{"id":"T150","span":{"begin":131,"end":135},"obj":"RB"},{"id":"T151","span":{"begin":136,"end":138},"obj":"PRP"},{"id":"T152","span":{"begin":139,"end":145},"obj":"VB"},{"id":"T153","span":{"begin":146,"end":150},"obj":"IN"},{"id":"T154","span":{"begin":151,"end":155},"obj":"NN"},{"id":"T155","span":{"begin":156,"end":171},"obj":"NN"},{"id":"T156","span":{"begin":172,"end":174},"obj":"IN"},{"id":"T157","span":{"begin":175,"end":181},"obj":"NN"}],"relations":[{"id":"R107","pred":"arg2Of","subj":"T133","obj":"T130"},{"id":"R108","pred":"arg1Of","subj":"T133","obj":"T131"},{"id":"R109","pred":"arg1Of","subj":"T133","obj":"T132"},{"id":"R110","pred":"arg1Of","subj":"T133","obj":"T134"},{"id":"R111","pred":"arg1Of","subj":"T133","obj":"T135"},{"id":"R112","pred":"arg2Of","subj":"T138","obj":"T135"},{"id":"R113","pred":"arg1Of","subj":"T138","obj":"T136"},{"id":"R114","pred":"arg1Of","subj":"T138","obj":"T137"},{"id":"R115","pred":"arg1Of","subj":"T142","obj":"T139"},{"id":"R116","pred":"arg1Of","subj":"T142","obj":"T140"},{"id":"R117","pred":"arg2Of","subj":"T143","obj":"T142"},{"id":"R118","pred":"arg1Of","subj":"T144","obj":"T141"},{"id":"R119","pred":"arg1Of","subj":"T144","obj":"T142"},{"id":"R120","pred":"arg1Of","subj":"T144","obj":"T143"},{"id":"R121","pred":"arg1Of","subj":"T147","obj":"T145"},{"id":"R122","pred":"arg1Of","subj":"T147","obj":"T146"},{"id":"R123","pred":"arg1Of","subj":"T147","obj":"T148"},{"id":"R124","pred":"arg2Of","subj":"T147","obj":"T149"},{"id":"R125","pred":"arg1Of","subj":"T149","obj":"T144"},{"id":"R126","pred":"arg2Of","subj":"T149","obj":"T148"},{"id":"R127","pred":"arg1Of","subj":"T151","obj":"T152"},{"id":"R128","pred":"arg1Of","subj":"T152","obj":"T150"},{"id":"R129","pred":"arg1Of","subj":"T155","obj":"T154"},{"id":"R130","pred":"arg1Of","subj":"T155","obj":"T156"},{"id":"R133","pred":"arg2Of","subj":"T157","obj":"T156"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T284","span":{"begin":21,"end":25},"obj":"WDT"},{"id":"T285","span":{"begin":26,"end":33},"obj":"VBZ"},{"id":"T286","span":{"begin":34,"end":42},"obj":"JJ"},{"id":"T287","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T288","span":{"begin":48,"end":61},"obj":"NN"},{"id":"T289","span":{"begin":61,"end":62},"obj":"."},{"id":"T290","span":{"begin":63,"end":70},"obj":"RB"},{"id":"T291","span":{"begin":70,"end":71},"obj":","},{"id":"T292","span":{"begin":72,"end":74},"obj":"PRP"},{"id":"T293","span":{"begin":75,"end":77},"obj":"VBZ"},{"id":"T294","span":{"begin":78,"end":85},"obj":"JJ"},{"id":"T295","span":{"begin":86,"end":89},"obj":"WRB"},{"id":"T296","span":{"begin":90,"end":94},"obj":"JJ"},{"id":"T297","span":{"begin":95,"end":102},"obj":"JJ"},{"id":"T298","span":{"begin":103,"end":116},"obj":"NN"},{"id":"T299","span":{"begin":117,"end":119},"obj":"VBZ"},{"id":"T300","span":{"begin":120,"end":129},"obj":"VBN"},{"id":"T301","span":{"begin":129,"end":130},"obj":"."},{"id":"T302","span":{"begin":131,"end":135},"obj":"RB"},{"id":"T303","span":{"begin":136,"end":138},"obj":"PRP"},{"id":"T304","span":{"begin":139,"end":145},"obj":"VBP"},{"id":"T305","span":{"begin":146,"end":150},"obj":"IN"},{"id":"T306","span":{"begin":151,"end":155},"obj":"NNP"},{"id":"T307","span":{"begin":156,"end":171},"obj":"NN"},{"id":"T308","span":{"begin":172,"end":174},"obj":"IN"},{"id":"T309","span":{"begin":175,"end":181},"obj":"NN"},{"id":"T280","span":{"begin":1,"end":3},"obj":"VBZ"},{"id":"T281","span":{"begin":4,"end":6},"obj":"DT"},{"id":"T282","span":{"begin":7,"end":12},"obj":"JJ"},{"id":"T283","span":{"begin":13,"end":20},"obj":"NN"}],"relations":[{"id":"R228","pred":"amod","subj":"T294","obj":"T298"},{"id":"R229","pred":"advmod","subj":"T295","obj":"T296"},{"id":"R230","pred":"amod","subj":"T296","obj":"T298"},{"id":"R231","pred":"amod","subj":"T297","obj":"T298"},{"id":"R232","pred":"nsubjpass","subj":"T298","obj":"T300"},{"id":"R233","pred":"auxpass","subj":"T299","obj":"T300"},{"id":"R234","pred":"ccomp","subj":"T300","obj":"T293"},{"id":"R235","pred":"punct","subj":"T301","obj":"T293"},{"id":"R236","pred":"advmod","subj":"T302","obj":"T304"},{"id":"R237","pred":"nsubj","subj":"T303","obj":"T304"},{"id":"R238","pred":"ROOT","subj":"T304","obj":"T304"},{"id":"R240","pred":"compound","subj":"T306","obj":"T307"},{"id":"R242","pred":"prep","subj":"T308","obj":"T307"},{"id":"R243","pred":"pobj","subj":"T309","obj":"T308"},{"id":"R524","pred":"det","subj":"T281","obj":"T283"},{"id":"R525","pred":"amod","subj":"T282","obj":"T283"},{"id":"R526","pred":"attr","subj":"T283","obj":"T280"},{"id":"R224","pred":"advmod","subj":"T290","obj":"T293"},{"id":"R225","pred":"punct","subj":"T291","obj":"T293"},{"id":"R226","pred":"nsubj","subj":"T292","obj":"T293"},{"id":"R227","pred":"ROOT","subj":"T293","obj":"T293"},{"id":"R218","pred":"nsubj","subj":"T284","obj":"T285"},{"id":"R219","pred":"relcl","subj":"T285","obj":"T283"},{"id":"R220","pred":"amod","subj":"T286","obj":"T288"},{"id":"R221","pred":"compound","subj":"T287","obj":"T288"},{"id":"R222","pred":"dobj","subj":"T288","obj":"T285"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T433","span":{"begin":156,"end":171},"obj":"http://purl.obolibrary.org/obo/GO_0016310"},{"id":"T436","span":{"begin":48,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    sentences

    {"project":"sentences","denotations":[{"id":"T96","span":{"begin":63,"end":130},"obj":"Sentence"},{"id":"T4","span":{"begin":63,"end":130},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T570","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T571","span":{"begin":95,"end":102},"obj":"Entity"},{"id":"T572","span":{"begin":103,"end":116},"obj":"Localization"},{"id":"T573","span":{"begin":120,"end":129},"obj":"Regulation"},{"id":"T574","span":{"begin":151,"end":155},"obj":"Protein"},{"id":"T575","span":{"begin":156,"end":171},"obj":"Phosphorylation"}],"relations":[{"id":"R445","pred":"themeOf","subj":"T570","obj":"T572"},{"id":"R446","pred":"locationOf","subj":"T571","obj":"T572"},{"id":"R447","pred":"themeOf","subj":"T572","obj":"T573"}],"attributes":[{"id":"M7","pred":"Speculation","subj":"T573","obj":"true"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T509","span":{"begin":7,"end":12},"obj":"Protein"},{"id":"T510","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T511","span":{"begin":95,"end":102},"obj":"Entity"},{"id":"T512","span":{"begin":103,"end":116},"obj":"Localization"},{"id":"T513","span":{"begin":120,"end":129},"obj":"Regulation"},{"id":"T514","span":{"begin":151,"end":155},"obj":"Protein"},{"id":"T516","span":{"begin":156,"end":171},"obj":"Phosphorylation"}],"relations":[{"id":"R400","pred":"themeOf","subj":"T510","obj":"T512"},{"id":"R401","pred":"locationOf","subj":"T511","obj":"T512"},{"id":"R402","pred":"themeOf","subj":"T512","obj":"T513"},{"id":"R403","pred":"themeOf","subj":"T514","obj":"T516"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T70","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T71","span":{"begin":95,"end":102},"obj":"Entity"},{"id":"T72","span":{"begin":103,"end":116},"obj":"Localization"},{"id":"T73","span":{"begin":120,"end":129},"obj":"Regulation"},{"id":"T74","span":{"begin":151,"end":155},"obj":"Protein"},{"id":"T75","span":{"begin":156,"end":171},"obj":"Phosphorylation"}],"relations":[{"id":"R57","pred":"themeOf","subj":"T70","obj":"T72"},{"id":"R58","pred":"locationOf","subj":"T71","obj":"T72"},{"id":"R59","pred":"themeOf","subj":"T72","obj":"T73"}],"attributes":[{"id":"M3","pred":"Speculation","subj":"T73","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}

    test2

    {"project":"test2","denotations":[{"id":"T41","span":{"begin":90,"end":94},"obj":"Protein"},{"id":"T42","span":{"begin":95,"end":102},"obj":"Entity"},{"id":"T43","span":{"begin":103,"end":116},"obj":"Localization"},{"id":"T44","span":{"begin":120,"end":129},"obj":"Regulation"},{"id":"T45","span":{"begin":151,"end":155},"obj":"Protein"},{"id":"T46","span":{"begin":156,"end":171},"obj":"Phosphorylation"}],"relations":[{"id":"R34","pred":"themeOf","subj":"T41","obj":"T43"},{"id":"R35","pred":"locationOf","subj":"T42","obj":"T43"},{"id":"R36","pred":"themeOf","subj":"T43","obj":"T44"}],"text":" is an NF-κB subunit that directs specific gene transcription. However, it is unknown how RPS3 nuclear translocation is regulated. Here we report that IKKβ phosphorylation of serine"}