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PMC:3062687 / 16489-16615 JSONTXT

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bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12395 12-17 P23396 denotes NleH1
T12396 31-34 P01375 denotes TNF
T12397 61-65 P23396 denotes RPS3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12055 0-10 RB denotes Remarkably
T12056 10-11 -COMMA- denotes ,
T12057 12-17 NN denotes NleH1
T12058 18-25 VB denotes reduced
T12059 26-30 CC denotes both
T12060 31-42 JJ denotes TNF-induced
T12061 42-43 -COMMA- denotes ,
T12062 44-46 RB denotes as
T12063 47-51 RB denotes well
T12064 52-54 IN denotes as
T12065 55-60 JJ denotes basal
T12066 61-65 NN denotes RPS3
T12067 66-81 NN denotes phosphorylation
T12068 82-84 TO denotes to
T12069 85-92 RB denotes roughly
T12070 93-95 CD denotes 20
T12071 95-96 NN denotes %
T12072 97-99 IN denotes of
T12073 100-107 NN denotes vehicle
T12074 108-115 NN denotes control
T12075 116-117 -LRB- denotes (
T12076 117-121 NNP denotes Fig.
T12077 122-124 NN denotes 6c
T12078 124-125 -RRB- denotes )
R9681 T12057 T12058 arg1Of NleH1,reduced
R9682 T12058 T12055 arg1Of reduced,Remarkably
R9683 T12058 T12056 arg1Of reduced,","
R9684 T12058 T12068 arg1Of reduced,to
R9685 T12060 T12064 arg1Of TNF-induced,as
R9686 T12064 T12059 arg1Of as,both
R9687 T12064 T12061 arg1Of as,","
R9688 T12064 T12062 arg1Of as,as
R9689 T12064 T12063 arg1Of as,well
R9690 T12065 T12064 arg2Of basal,as
R9691 T12067 T12058 arg2Of phosphorylation,reduced
R9692 T12067 T12060 arg1Of phosphorylation,TNF-induced
R9693 T12067 T12065 arg1Of phosphorylation,basal
R9694 T12067 T12066 arg1Of phosphorylation,RPS3
R9695 T12070 T12069 arg1Of 20,roughly
R9696 T12071 T12068 arg2Of %,to
R9697 T12071 T12070 arg1Of %,20
R9698 T12071 T12072 arg1Of %,of
R9699 T12074 T12072 arg2Of control,of
R9700 T12074 T12073 arg1Of control,vehicle
R9701 T12074 T12075 arg1Of control,(
R9702 T12077 T12075 arg2Of 6c,(
R9703 T12077 T12076 arg1Of 6c,Fig.
R9704 T12078 T12075 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12542 0-10 RB denotes Remarkably
T12543 10-11 , denotes ,
T12544 12-17 NNP denotes NleH1
T12545 18-25 VBD denotes reduced
T12546 26-30 DT denotes both
T12547 31-42 JJ denotes TNF-induced
T12548 42-43 , denotes ,
T12549 44-46 RB denotes as
T12550 47-51 RB denotes well
T12551 52-54 IN denotes as
T12552 55-60 JJ denotes basal
T12553 61-65 JJ denotes RPS3
T12554 66-81 NN denotes phosphorylation
T12555 82-84 TO denotes to
T12556 85-92 RB denotes roughly
T12557 93-95 CD denotes 20
T12558 95-96 NN denotes %
T12559 97-99 IN denotes of
T12560 100-107 NN denotes vehicle
T12561 108-115 NN denotes control
T12562 116-117 -LRB- denotes (
T12563 117-121 NNP denotes Fig.
T12564 122-124 CD denotes 6c
T12565 124-125 -RRB- denotes )
T12566 125-126 . denotes .
R10119 T12542 T12545 advmod Remarkably,reduced
R10120 T12543 T12545 punct ",",reduced
R10121 T12544 T12545 nsubj NleH1,reduced
R10122 T12545 T12545 ROOT reduced,reduced
R10123 T12546 T12554 det both,phosphorylation
R10124 T12547 T12554 amod TNF-induced,phosphorylation
R10125 T12548 T12547 punct ",",TNF-induced
R10126 T12549 T12551 advmod as,as
R10127 T12550 T12551 advmod well,as
R10128 T12551 T12547 cc as,TNF-induced
R10129 T12552 T12553 amod basal,RPS3
R10130 T12553 T12547 conj RPS3,TNF-induced
R10131 T12554 T12545 dobj phosphorylation,reduced
R10132 T12555 T12545 prep to,reduced
R10133 T12556 T12557 advmod roughly,20
R10134 T12557 T12558 nummod 20,%
R10135 T12558 T12555 pobj %,to
R10136 T12559 T12558 prep of,%
R10137 T12560 T12561 compound vehicle,control
R10138 T12561 T12559 pobj control,of
R10139 T12562 T12545 punct (,reduced
R10140 T12563 T12565 nmod Fig.,)
R10141 T12564 T12563 nummod 6c,Fig.
R10142 T12565 T12545 punct ),reduced
R10143 T12566 T12545 punct .,reduced

GO-BP

Id Subject Object Predicate Lexical cue
T13012 66-81 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

sentences

Id Subject Object Predicate Lexical cue
T11943 0-126 Sentence denotes Remarkably, NleH1 reduced both TNF-induced, as well as basal RPS3 phosphorylation to roughly 20% of vehicle control (Fig. 6c).
T115 0-126 Sentence denotes Remarkably, NleH1 reduced both TNF-induced, as well as basal RPS3 phosphorylation to roughly 20% of vehicle control (Fig. 6c).

events-check-again

Id Subject Object Predicate Lexical cue
T13477 12-17 Protein denotes NleH1
T13478 18-25 Negative_regulation denotes reduced
T13479 18-25 Negative_regulation denotes reduced
T13480 31-34 Protein denotes TNF
T13481 35-42 Positive_regulation denotes induced
T13482 61-65 Protein denotes RPS3
T13483 66-81 Phosphorylation denotes phosphorylation
R10830 T13477 T13479 causeOf NleH1,reduced
R10831 T13477 T13478 causeOf NleH1,reduced
R10832 T13480 T13481 causeOf TNF,induced
R10833 T13481 T13479 themeOf induced,reduced
R10834 T13482 T13483 themeOf RPS3,phosphorylation
R10835 T13483 T13481 themeOf phosphorylation,induced
R10836 T13483 T13478 themeOf phosphorylation,reduced

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T13061 12-17 Protein denotes NleH1
T13062 31-34 Protein denotes TNF
T13063 61-65 Protein denotes RPS3
T13064 117-124 Protein denotes Fig. 6c
T13065 66-81 Phosphorylation denotes phosphorylation
T13066 35-42 Positive_regulation denotes induced
T13067 18-25 Negative_regulation denotes reduced
R10554 T13061 T13067 causeOf NleH1,reduced
R10555 T13062 T13066 causeOf TNF,induced
R10556 T13063 T13065 themeOf RPS3,phosphorylation
R10557 T13065 T13066 themeOf phosphorylation,induced
R10558 T13066 T13067 themeOf induced,reduced

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T11849 12-17 Protein denotes NleH1
T11850 18-25 Negative_regulation denotes reduced
T11851 18-25 Negative_regulation denotes reduced
T11852 31-34 Protein denotes TNF
T11853 35-42 Positive_regulation denotes induced
T11854 61-65 Protein denotes RPS3
T11855 66-81 Phosphorylation denotes phosphorylation
R9517 T11849 T11851 causeOf NleH1,reduced
R9518 T11849 T11850 causeOf NleH1,reduced
R9519 T11852 T11853 causeOf TNF,induced
R9520 T11853 T11851 themeOf induced,reduced
R9521 T11854 T11855 themeOf RPS3,phosphorylation
R9522 T11855 T11853 themeOf phosphorylation,induced
R9523 T11855 T11850 themeOf phosphorylation,reduced

test2

Id Subject Object Predicate Lexical cue Speculation
T11742 12-17 Protein denotes NleH1
T11743 18-25 Negative_regulation denotes reduced
T11744 31-34 Protein denotes TNF true
T11745 35-42 Positive_regulation denotes induced
T11746 61-65 Protein denotes RPS3
T11747 66-81 Phosphorylation denotes phosphorylation
R9440 T11742 T11743 causeOf NleH1,reduced
R9441 T11744 T11745 causeOf TNF,induced
R9442 T11745 T11743 themeOf induced,reduced
R9443 T11746 T11747 themeOf RPS3,phosphorylation
R9444 T11747 T11745 themeOf phosphorylation,induced
R9445 T11747 T11743 themeOf phosphorylation,reduced