PMC:2817507 / 394-736
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T272 | 337-339 | IN | denotes | of |
T271 | 328-336 | NN | denotes | activity |
T270 | 324-327 | DT | denotes | the |
T269 | 320-323 | CC | denotes | and |
T268 | 318-319 | -COMMA- | denotes | , |
T267 | 317-318 | -RRB- | denotes | ) |
T266 | 311-317 | NN | denotes | p-IκBα |
T265 | 310-311 | -LRB- | denotes | ( |
T264 | 308-309 | NN | denotes | B |
T263 | 302-307 | NN | denotes | kappa |
T262 | 299-301 | IN | denotes | of |
T261 | 288-298 | NN | denotes | inhibitors |
T260 | 285-287 | IN | denotes | of |
T259 | 269-284 | NN | denotes | phosphorylation |
T258 | 265-268 | DT | denotes | the |
T257 | 263-264 | -COMMA- | denotes | , |
T256 | 256-263 | NN | denotes | protein |
T255 | 252-255 | CC | denotes | and |
T254 | 247-251 | NN | denotes | mRNA |
T253 | 242-246 | NN | denotes | TLR4 |
T252 | 237-240 | NN | denotes | ICH |
T251 | 231-236 | IN | denotes | after |
T250 | 226-230 | NN | denotes | rats |
T249 | 219-225 | NNP | denotes | Wistar |
T248 | 216-218 | IN | denotes | of |
T247 | 208-215 | NN | denotes | tissues |
T246 | 202-207 | NN | denotes | brain |
T245 | 199-201 | IN | denotes | in |
T244 | 189-198 | NN | denotes | signaling |
T243 | 184-188 | NN | denotes | NFκB |
T242 | 170-183 | JJ | denotes | TLR4-mediated |
T241 | 167-169 | IN | denotes | of |
T240 | 156-166 | NN | denotes | activation |
T239 | 152-155 | DT | denotes | the |
T238 | 148-151 | CC | denotes | and |
T237 | 143-147 | NN | denotes | TLR4 |
T236 | 140-142 | IN | denotes | of |
T235 | 129-139 | NN | denotes | expression |
T234 | 125-128 | DT | denotes | the |
T233 | 122-124 | IN | denotes | of |
T232 | 114-121 | NN | denotes | profile |
T231 | 105-113 | JJ | denotes | temporal |
T230 | 101-104 | DT | denotes | the |
T229 | 92-100 | VB | denotes | evaluate |
T228 | 89-91 | TO | denotes | to |
T227 | 85-88 | VB | denotes | was |
T226 | 79-84 | NN | denotes | study |
T225 | 71-78 | JJ | denotes | present |
T224 | 67-70 | DT | denotes | The |
T223 | 58-65 | JJ | denotes | unknown |
T222 | 50-57 | VB | denotes | remains |
T221 | 46-49 | NN | denotes | ICH |
T220 | 43-45 | IN | denotes | of |
T219 | 30-42 | NN | denotes | pathogenesis |
T218 | 26-29 | DT | denotes | the |
T217 | 23-25 | IN | denotes | in |
T216 | 13-22 | NN | denotes | signaling |
T215 | 8-12 | NN | denotes | NFκB |
R83 | T216 | T215 | arg1Of | signaling,NFκB |
R84 | T219 | T217 | arg2Of | pathogenesis,in |
R85 | T219 | T218 | arg1Of | pathogenesis,the |
R86 | T219 | T220 | arg1Of | pathogenesis,of |
R87 | T221 | T220 | arg2Of | ICH,of |
R90 | T223 | T222 | arg2Of | unknown,remains |
R91 | T226 | T224 | arg1Of | study,The |
R92 | T226 | T225 | arg1Of | study,present |
R93 | T226 | T227 | arg1Of | study,was |
R94 | T229 | T227 | arg2Of | evaluate,was |
R95 | T229 | T228 | arg1Of | evaluate,to |
R96 | T232 | T230 | arg1Of | profile,the |
R97 | T232 | T231 | arg1Of | profile,temporal |
R98 | T232 | T233 | arg1Of | profile,of |
R99 | T232 | T238 | arg1Of | profile,and |
R100 | T235 | T233 | arg2Of | expression,of |
R101 | T235 | T234 | arg1Of | expression,the |
R102 | T235 | T236 | arg1Of | expression,of |
R103 | T237 | T236 | arg2Of | TLR4,of |
R104 | T238 | T229 | arg2Of | and,evaluate |
R105 | T240 | T238 | arg2Of | activation,and |
R106 | T240 | T239 | arg1Of | activation,the |
R107 | T240 | T241 | arg1Of | activation,of |
R108 | T240 | T245 | arg1Of | activation,in |
R109 | T244 | T241 | arg2Of | signaling,of |
R110 | T244 | T242 | arg1Of | signaling,TLR4-mediated |
R111 | T244 | T243 | arg1Of | signaling,NFκB |
R112 | T247 | T245 | arg2Of | tissues,in |
R113 | T247 | T246 | arg1Of | tissues,brain |
R114 | T247 | T248 | arg1Of | tissues,of |
R115 | T250 | T248 | arg2Of | rats,of |
R116 | T250 | T249 | arg1Of | rats,Wistar |
R117 | T250 | T251 | arg1Of | rats,after |
R118 | T252 | T251 | arg2Of | ICH,after |
R119 | T254 | T255 | arg1Of | mRNA,and |
R120 | T255 | T253 | arg1Of | and,TLR4 |
R121 | T255 | T257 | arg1Of | and,"," |
R122 | T255 | T269 | arg1Of | and,and |
R123 | T256 | T255 | arg2Of | protein,and |
R124 | T259 | T257 | arg2Of | phosphorylation,"," |
R125 | T259 | T258 | arg1Of | phosphorylation,the |
R126 | T259 | T260 | arg1Of | phosphorylation,of |
R127 | T261 | T260 | arg2Of | inhibitors,of |
R128 | T261 | T262 | arg1Of | inhibitors,of |
R129 | T264 | T262 | arg2Of | B,of |
R130 | T264 | T263 | arg1Of | B,kappa |
R131 | T264 | T265 | arg1Of | B,( |
R132 | T266 | T265 | arg2Of | p-IκBα,( |
R133 | T267 | T265 | arg3Of | ),( |
R134 | T269 | T268 | arg1Of | and,"," |
R137 | T271 | T269 | arg2Of | activity,and |
R138 | T271 | T270 | arg1Of | activity,the |
R139 | T271 | T272 | arg1Of | activity,of |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T94 | 143-147 | Protein | denotes | TLR4 |
T95 | 170-174 | Protein | denotes | TLR4 |
T96 | 242-246 | Protein | denotes | TLR4 |
T97 | 288-309 | Protein | denotes | inhibitors of kappa B |
T98 | 313-317 | Protein | denotes | IκBα |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T627 | 143-147 | http://www.uniprot.org/uniprot/O00206 | denotes | TLR4 |
T628 | 170-174 | http://www.uniprot.org/uniprot/O00206 | denotes | TLR4 |
T629 | 242-246 | http://www.uniprot.org/uniprot/O00206 | denotes | TLR4 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T61 | 208-215 | http://purl.obolibrary.org/obo/UBERON_0000479 | denotes | tissues |
T58 | 202-207 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T105 | 30-42 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
T108 | 13-22 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T109 | 189-198 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T117 | 256-284 | http://purl.obolibrary.org/obo/GO_0006468 | denotes | protein, the phosphorylation |
T118 | 269-284 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T67 | 67-241 | Sentence | denotes | The present study was to evaluate the temporal profile of the expression of TLR4 and the activation of TLR4-mediated NFκB signaling in brain tissues of Wistar rats after ICH. |
T6 | 67-241 | Sentence | denotes | The present study was to evaluate the temporal profile of the expression of TLR4 and the activation of TLR4-mediated NFκB signaling in brain tissues of Wistar rats after ICH. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T151 | 313-317 | Protein | denotes | IκBα |
T150 | 288-309 | Protein | denotes | inhibitors of kappa B |
T149 | 242-246 | Protein | denotes | TLR4 |
T148 | 170-174 | Protein | denotes | TLR4 |
T147 | 143-147 | Protein | denotes | TLR4 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T734 | 269-284 | Phosphorylation | denotes | phosphorylation |
T733 | 129-139 | Gene_expression | denotes | expression |
T729 | 313-317 | Protein | denotes | IκBα |
T728 | 288-309 | Protein | denotes | inhibitors of kappa B |
T727 | 242-246 | Protein | denotes | TLR4 |
T726 | 170-174 | Protein | denotes | TLR4 |
T725 | 143-147 | Protein | denotes | TLR4 |
R509 | T725 | T733 | themeOf | TLR4,expression |
R510 | T727 | T734 | themeOf | TLR4,phosphorylation |
R511 | T728 | T734 | themeOf | inhibitors of kappa B,phosphorylation |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T636 | 143-147 | Protein | denotes | TLR4 |
T637 | 170-174 | Protein | denotes | TLR4 |
T638 | 242-246 | Protein | denotes | TLR4 |
T639 | 288-309 | Protein | denotes | inhibitors of kappa B |
T640 | 313-317 | Protein | denotes | IκBα |
T645 | 129-139 | Gene_expression | denotes | expression |
T646 | 269-284 | Phosphorylation | denotes | phosphorylation |
R529 | T636 | T645 | themeOf | TLR4,expression |
R530 | T638 | T646 | themeOf | TLR4,phosphorylation |
R531 | T639 | T646 | themeOf | inhibitors of kappa B,phosphorylation |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T690 | 269-284 | Phosphorylation | denotes | phosphorylation |
T689 | 129-139 | Gene_expression | denotes | expression |
T685 | 313-317 | Protein | denotes | IκBα |
T684 | 288-309 | Protein | denotes | inhibitors of kappa B |
T683 | 242-246 | Protein | denotes | TLR4 |
T682 | 170-174 | Protein | denotes | TLR4 |
T681 | 143-147 | Protein | denotes | TLR4 |
R491 | T681 | T689 | themeOf | TLR4,expression |
R492 | T683 | T690 | themeOf | TLR4,phosphorylation |
R493 | T684 | T690 | themeOf | inhibitors of kappa B,phosphorylation |
R494 | T685 | T690 | themeOf | IκBα,phosphorylation |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T771 | 167-230 | Positive_regulation | denotes | of TLR4-mediated NFκB signaling in brain tissues of Wistar rats |
T769 | 167-230 | Regulation | denotes | of TLR4-mediated NFκB signaling in brain tissues of Wistar rats |
T766 | 125-147 | Gene_expression | denotes | the expression of TLR4 |
T762 | 140-147 | Protein | denotes | of TLR4 |
T758 | 311-317 | Protein | denotes | p-IκBα |
T754 | 256-263 | Protein | denotes | protein |
T752 | 288-319 | Protein | denotes | inhibitors of kappa B (p-IκBα), |
T751 | 170-183 | Protein | denotes | TLR4-mediated |
T747 | 242-246 | Protein | denotes | TLR4 |
T740 | 184-188 | Protein | denotes | NFκB |
T741 | 8-12 | Protein | denotes | NFκB |
T742 | 242-251 | Protein | denotes | TLR4 mRNA |
R519 | T751 | T769 | causeOf | TLR4-mediated,of TLR4-mediated NFκB signaling in brain tissues of Wistar rats |
R522 | T762 | T766 | themeOf | of TLR4,the expression of TLR4 |
R524 | T771 | T769 | themeOf | of TLR4-mediated NFκB signaling in brain tissues of Wistar rats,of TLR4-mediated NFκB signaling in brain tissues of Wistar rats |
R540 | T740 | T771 | causeOf | NFκB,of TLR4-mediated NFκB signaling in brain tissues of Wistar rats |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T507 | 337-339 | IN | denotes | of |
T506 | 328-336 | NN | denotes | activity |
T505 | 324-327 | DT | denotes | the |
T504 | 320-323 | CC | denotes | and |
T503 | 318-319 | , | denotes | , |
T502 | 317-318 | -RRB- | denotes | ) |
T501 | 311-317 | NNP | denotes | p-IκBα |
T500 | 310-311 | -LRB- | denotes | ( |
T499 | 308-309 | NNP | denotes | B |
T498 | 302-307 | NN | denotes | kappa |
T497 | 299-301 | IN | denotes | of |
T496 | 288-298 | NNS | denotes | inhibitors |
T495 | 285-287 | IN | denotes | of |
T494 | 269-284 | NN | denotes | phosphorylation |
T493 | 265-268 | DT | denotes | the |
T492 | 263-264 | , | denotes | , |
T491 | 256-263 | NN | denotes | protein |
T490 | 252-255 | CC | denotes | and |
T489 | 247-251 | NNP | denotes | mRNA |
T488 | 242-246 | CD | denotes | TLR4 |
T487 | 240-241 | . | denotes | . |
T486 | 237-240 | NNP | denotes | ICH |
T485 | 231-236 | IN | denotes | after |
T484 | 226-230 | NNS | denotes | rats |
T483 | 219-225 | NNP | denotes | Wistar |
T482 | 216-218 | IN | denotes | of |
T481 | 208-215 | NNS | denotes | tissues |
T480 | 202-207 | NN | denotes | brain |
T479 | 199-201 | IN | denotes | in |
T478 | 189-198 | VBG | denotes | signaling |
T477 | 184-188 | NNP | denotes | NFκB |
T476 | 170-183 | JJ | denotes | TLR4-mediated |
T475 | 167-169 | IN | denotes | of |
T474 | 156-166 | NN | denotes | activation |
T473 | 152-155 | DT | denotes | the |
T472 | 148-151 | CC | denotes | and |
T471 | 143-147 | CD | denotes | TLR4 |
T470 | 140-142 | IN | denotes | of |
T469 | 129-139 | NN | denotes | expression |
T468 | 125-128 | DT | denotes | the |
T467 | 122-124 | IN | denotes | of |
T466 | 114-121 | NN | denotes | profile |
T465 | 105-113 | JJ | denotes | temporal |
T464 | 101-104 | DT | denotes | the |
T463 | 92-100 | VB | denotes | evaluate |
T462 | 89-91 | TO | denotes | to |
T461 | 85-88 | VBD | denotes | was |
T460 | 79-84 | NN | denotes | study |
T459 | 71-78 | JJ | denotes | present |
T458 | 67-70 | DT | denotes | The |
T457 | 65-66 | . | denotes | . |
T456 | 58-65 | JJ | denotes | unknown |
T455 | 50-57 | VBZ | denotes | remains |
T454 | 46-49 | NNP | denotes | ICH |
T453 | 43-45 | IN | denotes | of |
T452 | 30-42 | NN | denotes | pathogenesis |
T451 | 26-29 | DT | denotes | the |
T450 | 23-25 | IN | denotes | in |
T449 | 13-22 | VBG | denotes | signaling |
T448 | 8-12 | NNP | denotes | NFκB |
R317 | T450 | T449 | prep | in,signaling |
R318 | T451 | T452 | det | the,pathogenesis |
R319 | T452 | T450 | pobj | pathogenesis,in |
R320 | T453 | T452 | prep | of,pathogenesis |
R321 | T454 | T453 | pobj | ICH,of |
R322 | T455 | T455 | ROOT | remains,remains |
R323 | T456 | T455 | acomp | unknown,remains |
R324 | T457 | T455 | punct | .,remains |
R325 | T458 | T460 | det | The,study |
R326 | T459 | T460 | amod | present,study |
R327 | T460 | T461 | nsubj | study,was |
R328 | T461 | T461 | ROOT | was,was |
R329 | T462 | T463 | aux | to,evaluate |
R330 | T463 | T461 | xcomp | evaluate,was |
R331 | T464 | T466 | det | the,profile |
R332 | T465 | T466 | amod | temporal,profile |
R333 | T466 | T463 | dobj | profile,evaluate |
R334 | T467 | T466 | prep | of,profile |
R335 | T468 | T469 | det | the,expression |
R336 | T469 | T467 | pobj | expression,of |
R337 | T470 | T469 | prep | of,expression |
R338 | T471 | T470 | pobj | TLR4,of |
R339 | T472 | T469 | cc | and,expression |
R340 | T473 | T474 | det | the,activation |
R341 | T474 | T469 | conj | activation,expression |
R342 | T475 | T474 | prep | of,activation |
R343 | T476 | T477 | compound | TLR4-mediated,NFκB |
R344 | T477 | T475 | pobj | NFκB,of |
R345 | T478 | T466 | acl | signaling,profile |
R346 | T479 | T478 | prep | in,signaling |
R347 | T480 | T481 | compound | brain,tissues |
R348 | T481 | T479 | pobj | tissues,in |
R349 | T482 | T481 | prep | of,tissues |
R350 | T483 | T484 | compound | Wistar,rats |
R351 | T484 | T482 | pobj | rats,of |
R352 | T485 | T463 | prep | after,evaluate |
R353 | T486 | T485 | pobj | ICH,after |
R354 | T487 | T461 | punct | .,was |
R355 | T488 | T489 | nummod | TLR4,mRNA |
R357 | T490 | T489 | cc | and,mRNA |
R358 | T491 | T489 | conj | protein,mRNA |
R359 | T492 | T491 | punct | ",",protein |
R360 | T493 | T494 | det | the,phosphorylation |
R361 | T494 | T491 | appos | phosphorylation,protein |
R362 | T495 | T494 | prep | of,phosphorylation |
R363 | T496 | T495 | pobj | inhibitors,of |
R364 | T497 | T496 | prep | of,inhibitors |
R365 | T498 | T499 | compound | kappa,B |
R366 | T499 | T497 | pobj | B,of |
R367 | T500 | T499 | punct | (,B |
R368 | T501 | T499 | appos | p-IκBα,B |
R369 | T502 | T499 | punct | ),B |
R370 | T503 | T494 | punct | ",",phosphorylation |
R371 | T504 | T494 | cc | and,phosphorylation |
R372 | T505 | T506 | det | the,activity |
R373 | T506 | T494 | conj | activity,phosphorylation |
R374 | T507 | T506 | prep | of,activity |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T132 | 269-284 | Phosphorylation | denotes | phosphorylation |
T130 | 242-251 | Protein | denotes | TLR4 mRNA |
T129 | 129-139 | Gene_expression | denotes | expression |
T128 | 184-188 | Protein | denotes | NFκB |
T127 | 170-174 | Protein | denotes | TLR4 |
T126 | 143-147 | Protein | denotes | TLR4 |
T125 | 8-12 | Protein | denotes | NFκB |
R18 | T126 | T129 | themeOf | TLR4,expression |
R19 | T130 | T132 | themeOf | TLR4 mRNA,phosphorylation |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 129-139 | Gene_expression | denotes | expression |
T21 | 313-317 | Protein | denotes | IκBα |
T20 | 288-309 | Protein | denotes | inhibitors of kappa B |
T19 | 242-246 | Protein | denotes | TLR4 |
T18 | 170-174 | Protein | denotes | TLR4 |
T17 | 143-147 | Protein | denotes | TLR4 |
R2 | T17 | T25 | themeOf | TLR4,expression |
R3 | T21 | T20 | equivalentTo | IκBα,inhibitors of kappa B |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T37 | 313-317 | Protein | denotes | IκBα |
T36 | 288-309 | Protein | denotes | inhibitors of kappa B |
T35 | 242-246 | Protein | denotes | TLR4 |
T34 | 170-174 | Protein | denotes | TLR4 |
T33 | 143-147 | Protein | denotes | TLR4 |
T50 | 313-317 | Protein | denotes | IκBα |
T49 | 288-309 | Protein | denotes | inhibitors of kappa B |
T48 | 242-246 | Protein | denotes | TLR4 |
T47 | 170-174 | Protein | denotes | TLR4 |
T46 | 143-147 | Protein | denotes | TLR4 |
T45 | 129-139 | Gene_expression | denotes | expression |
R5 | T46 | T45 | themeOf | TLR4,expression |
R6 | T50 | T49 | equivalentTo | IκBα,inhibitors of kappa B |