PMC:2664230 / 3943-4119 JSONTXT

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1138","span":{"begin":83,"end":90},"obj":"Negative_regulation"},{"id":"T1139","span":{"begin":97,"end":106},"obj":"Regulation"},{"id":"T1140","span":{"begin":129,"end":142},"obj":"Transcription"},{"id":"T1141","span":{"begin":164,"end":169},"obj":"Protein"}],"relations":[{"id":"R840","pred":"themeOf","subj":"T1139","obj":"T1138"},{"id":"R841","pred":"themeOf","subj":"T1140","obj":"T1139"},{"id":"R842","pred":"themeOf","subj":"T1141","obj":"T1140"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    2_test

    {"project":"2_test","denotations":[{"id":"18568240-8702838-22101118","span":{"begin":175,"end":176},"obj":"8702838"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T1884","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T1885","span":{"begin":3,"end":6},"obj":"VB"},{"id":"T1886","span":{"begin":7,"end":11},"obj":"VB"},{"id":"T1887","span":{"begin":12,"end":19},"obj":"RB"},{"id":"T1888","span":{"begin":20,"end":32},"obj":"VB"},{"id":"T1889","span":{"begin":33,"end":37},"obj":"IN"},{"id":"T1890","span":{"begin":38,"end":44},"obj":"NN"},{"id":"T1891","span":{"begin":45,"end":49},"obj":"WDT"},{"id":"T1892","span":{"begin":50,"end":58},"obj":"VB"},{"id":"T1893","span":{"begin":59,"end":72},"obj":"JJ"},{"id":"T1894","span":{"begin":73,"end":77},"obj":"NN"},{"id":"T1895","span":{"begin":78,"end":82},"obj":"RB"},{"id":"T1896","span":{"begin":83,"end":90},"obj":"VB"},{"id":"T1897","span":{"begin":91,"end":106},"obj":"JJ"},{"id":"T1898","span":{"begin":107,"end":123},"obj":"JJ"},{"id":"T1899","span":{"begin":124,"end":128},"obj":"NN"},{"id":"T1900","span":{"begin":129,"end":142},"obj":"NN"},{"id":"T1901","span":{"begin":142,"end":143},"obj":"-COMMA-"},{"id":"T1902","span":{"begin":144,"end":156},"obj":"RB"},{"id":"T1903","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T1904","span":{"begin":160,"end":163},"obj":"DT"},{"id":"T1905","span":{"begin":164,"end":169},"obj":"NN"},{"id":"T1906","span":{"begin":170,"end":176},"obj":"NN"}],"relations":[{"id":"R1578","pred":"arg1Of","subj":"T1884","obj":"T1885"},{"id":"R1579","pred":"arg1Of","subj":"T1884","obj":"T1886"},{"id":"R1580","pred":"arg2Of","subj":"T1884","obj":"T1888"},{"id":"R1581","pred":"arg2Of","subj":"T1888","obj":"T1885"},{"id":"R1582","pred":"arg2Of","subj":"T1888","obj":"T1886"},{"id":"R1583","pred":"arg1Of","subj":"T1888","obj":"T1887"},{"id":"R1584","pred":"arg1Of","subj":"T1890","obj":"T1891"},{"id":"R1585","pred":"arg1Of","subj":"T1890","obj":"T1892"},{"id":"R1586","pred":"arg1Of","subj":"T1890","obj":"T1896"},{"id":"R1587","pred":"arg2Of","subj":"T1894","obj":"T1892"},{"id":"R1588","pred":"arg1Of","subj":"T1894","obj":"T1893"},{"id":"R1589","pred":"arg3Of","subj":"T1896","obj":"T1888"},{"id":"R1590","pred":"arg1Of","subj":"T1896","obj":"T1889"},{"id":"R1591","pred":"arg1Of","subj":"T1896","obj":"T1895"},{"id":"R1592","pred":"arg2Of","subj":"T1900","obj":"T1896"},{"id":"R1593","pred":"arg1Of","subj":"T1900","obj":"T1897"},{"id":"R1594","pred":"arg1Of","subj":"T1900","obj":"T1898"},{"id":"R1595","pred":"arg1Of","subj":"T1900","obj":"T1899"},{"id":"R1596","pred":"arg1Of","subj":"T1900","obj":"T1901"},{"id":"R1597","pred":"arg1Of","subj":"T1900","obj":"T1903"},{"id":"R1598","pred":"arg1Of","subj":"T1903","obj":"T1902"},{"id":"R1599","pred":"arg2Of","subj":"T1906","obj":"T1903"},{"id":"R1600","pred":"arg1Of","subj":"T1906","obj":"T1904"},{"id":"R1601","pred":"arg1Of","subj":"T1906","obj":"T1905"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1449","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T1450","span":{"begin":3,"end":6},"obj":"VBZ"},{"id":"T1451","span":{"begin":7,"end":11},"obj":"VBN"},{"id":"T1452","span":{"begin":12,"end":19},"obj":"RB"},{"id":"T1453","span":{"begin":20,"end":32},"obj":"VBN"},{"id":"T1454","span":{"begin":33,"end":37},"obj":"IN"},{"id":"T1455","span":{"begin":38,"end":44},"obj":"NNS"},{"id":"T1456","span":{"begin":45,"end":49},"obj":"WDT"},{"id":"T1457","span":{"begin":50,"end":58},"obj":"VBP"},{"id":"T1458","span":{"begin":59,"end":72},"obj":"JJ"},{"id":"T1459","span":{"begin":73,"end":77},"obj":"NNP"},{"id":"T1460","span":{"begin":78,"end":82},"obj":"RB"},{"id":"T1461","span":{"begin":83,"end":90},"obj":"VBP"},{"id":"T1462","span":{"begin":91,"end":106},"obj":"JJ"},{"id":"T1463","span":{"begin":107,"end":123},"obj":"JJ"},{"id":"T1464","span":{"begin":124,"end":128},"obj":"NN"},{"id":"T1465","span":{"begin":129,"end":142},"obj":"NN"},{"id":"T1466","span":{"begin":142,"end":143},"obj":","},{"id":"T1467","span":{"begin":144,"end":156},"obj":"RB"},{"id":"T1468","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T1469","span":{"begin":160,"end":163},"obj":"DT"},{"id":"T1470","span":{"begin":164,"end":169},"obj":"NNP"},{"id":"T1471","span":{"begin":170,"end":174},"obj":"NN"},{"id":"T1472","span":{"begin":174,"end":176},"obj":"CD"}],"relations":[{"id":"R1135","pred":"nsubjpass","subj":"T1449","obj":"T1453"},{"id":"R1136","pred":"aux","subj":"T1450","obj":"T1453"},{"id":"R1137","pred":"auxpass","subj":"T1451","obj":"T1453"},{"id":"R1138","pred":"advmod","subj":"T1452","obj":"T1453"},{"id":"R1139","pred":"ROOT","subj":"T1453","obj":"T1453"},{"id":"R1140","pred":"mark","subj":"T1454","obj":"T1461"},{"id":"R1141","pred":"nsubj","subj":"T1455","obj":"T1461"},{"id":"R1142","pred":"nsubj","subj":"T1456","obj":"T1457"},{"id":"R1143","pred":"relcl","subj":"T1457","obj":"T1455"},{"id":"R1144","pred":"compound","subj":"T1458","obj":"T1459"},{"id":"R1145","pred":"dobj","subj":"T1459","obj":"T1457"},{"id":"R1146","pred":"advmod","subj":"T1460","obj":"T1461"},{"id":"R1147","pred":"ccomp","subj":"T1461","obj":"T1453"},{"id":"R1148","pred":"amod","subj":"T1462","obj":"T1465"},{"id":"R1149","pred":"amod","subj":"T1463","obj":"T1465"},{"id":"R1150","pred":"compound","subj":"T1464","obj":"T1465"},{"id":"R1151","pred":"dobj","subj":"T1465","obj":"T1461"},{"id":"R1152","pred":"punct","subj":"T1466","obj":"T1465"},{"id":"R1153","pred":"advmod","subj":"T1467","obj":"T1468"},{"id":"R1154","pred":"prep","subj":"T1468","obj":"T1465"},{"id":"R1155","pred":"det","subj":"T1469","obj":"T1471"},{"id":"R1156","pred":"compound","subj":"T1470","obj":"T1471"},{"id":"R1157","pred":"pobj","subj":"T1471","obj":"T1468"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    GO-BP

    {"project":"GO-BP","denotations":[{"id":"T2119","span":{"begin":129,"end":142},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T2167","span":{"begin":83,"end":96},"obj":"http://purl.obolibrary.org/obo/GO_0032088"},{"id":"T2168","span":{"begin":83,"end":96},"obj":"http://purl.obolibrary.org/obo/GO_0007252"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T2221","span":{"begin":59,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0005622"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    sentences

    {"project":"sentences","denotations":[{"id":"T1156","span":{"begin":0,"end":176},"obj":"Sentence"},{"id":"T30","span":{"begin":0,"end":176},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T2381","span":{"begin":83,"end":90},"obj":"Negative_regulation"},{"id":"T2382","span":{"begin":97,"end":106},"obj":"Regulation"},{"id":"T2383","span":{"begin":129,"end":142},"obj":"Transcription"},{"id":"T2384","span":{"begin":164,"end":169},"obj":"Protein"}],"relations":[{"id":"R1842","pred":"themeOf","subj":"T2382","obj":"T2381"},{"id":"R1843","pred":"themeOf","subj":"T2383","obj":"T2382"},{"id":"R1845","pred":"themeOf","subj":"T2384","obj":"T2383"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2271","span":{"begin":91,"end":96},"obj":"Protein"},{"id":"T2272","span":{"begin":164,"end":169},"obj":"Protein"},{"id":"T2273","span":{"begin":129,"end":142},"obj":"Transcription"},{"id":"T2274","span":{"begin":129,"end":142},"obj":"Transcription"},{"id":"T2275","span":{"begin":83,"end":90},"obj":"Negative_regulation"},{"id":"T2276","span":{"begin":83,"end":90},"obj":"Negative_regulation"}],"relations":[{"id":"R1784","pred":"themeOf","subj":"T2271","obj":"T2273"},{"id":"R1785","pred":"themeOf","subj":"T2272","obj":"T2274"},{"id":"R1787","pred":"causeOf","subj":"T2272","obj":"T2275"},{"id":"R1788","pred":"causeOf","subj":"T2272","obj":"T2276"},{"id":"R1789","pred":"themeOf","subj":"T2273","obj":"T2275"},{"id":"R1791","pred":"themeOf","subj":"T2274","obj":"T2276"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T2064","span":{"begin":164,"end":167},"obj":"P01375"},{"id":"T2065","span":{"begin":164,"end":169},"obj":"P01375"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}

    test2

    {"project":"test2","denotations":[{"id":"T1114","span":{"begin":83,"end":90},"obj":"Negative_regulation"},{"id":"T1115","span":{"begin":97,"end":106},"obj":"Regulation"},{"id":"T1116","span":{"begin":164,"end":169},"obj":"Protein"}],"relations":[{"id":"R827","pred":"themeOf","subj":"T1115","obj":"T1114"}],"attributes":[{"id":"M17","pred":"Speculation","subj":"T1115","obj":"true"}],"text":"It has been clearly demonstrated that agents that increase intracellular cAMP also inhibit NF-κB-dependent pro-inflammatory gene transcription, particularly of the TNF-α gene.9"}