PMC:2664230 / 20161-20386
Annnotations
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8313 | 161-166 | Protein | denotes | IKK-1 |
| T8314 | 171-176 | Protein | denotes | IKK-2 |
| T8315 | 192-206 | Phosphorylation | denotes | phosphorylates |
| T8316 | 211-216 | Protein | denotes | I-κBα |
| R6796 | T8316 | T8315 | themeOf | I-κBα,phosphorylates |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8903 | 0-9 | VBG | denotes | Following |
| T8904 | 10-18 | JJ | denotes | cellular |
| T8905 | 19-30 | NN | denotes | stimulation |
| T8906 | 31-35 | IN | denotes | with |
| T8907 | 36-39 | NNP | denotes | LPS |
| T8908 | 40-43 | CC | denotes | and |
| T8909 | 44-55 | JJ | denotes | chemotactic |
| T8910 | 56-63 | NNS | denotes | factors |
| T8911 | 63-64 | , | denotes | , |
| T8912 | 65-70 | JJ | denotes | NF-κB |
| T8913 | 71-80 | JJ | denotes | inducible |
| T8914 | 81-87 | NN | denotes | kinase |
| T8915 | 88-102 | NNS | denotes | phosphorylates |
| T8916 | 103-106 | CC | denotes | and |
| T8917 | 107-116 | VBZ | denotes | activates |
| T8918 | 117-120 | DT | denotes | the |
| T8919 | 121-125 | JJ | denotes | I-κB |
| T8920 | 126-132 | NN | denotes | kinase |
| T8921 | 133-134 | -LRB- | denotes | ( |
| T8922 | 134-137 | NNP | denotes | IKK |
| T8923 | 137-138 | -RRB- | denotes | ) |
| T8924 | 139-146 | JJ | denotes | complex |
| T8925 | 147-157 | VBG | denotes | consisting |
| T8926 | 158-160 | IN | denotes | of |
| T8927 | 161-166 | NN | denotes | IKK-1 |
| T8928 | 167-170 | CC | denotes | and |
| T8929 | 171-176 | NN | denotes | IKK-2 |
| T8930 | 176-177 | , | denotes | , |
| T8931 | 178-183 | WDT | denotes | which |
| T8932 | 184-186 | IN | denotes | in |
| T8933 | 187-191 | NN | denotes | turn |
| T8934 | 192-206 | VBZ | denotes | phosphorylates |
| T8935 | 207-210 | DT | denotes | the |
| T8936 | 211-216 | JJ | denotes | I-κBα |
| T8937 | 217-224 | NN | denotes | subunit |
| T8938 | 224-225 | . | denotes | . |
| R7324 | T8903 | T8917 | csubj | Following,activates |
| R7325 | T8904 | T8905 | amod | cellular,stimulation |
| R7326 | T8905 | T8903 | pobj | stimulation,Following |
| R7327 | T8906 | T8905 | prep | with,stimulation |
| R7328 | T8907 | T8906 | pobj | LPS,with |
| R7329 | T8908 | T8907 | cc | and,LPS |
| R7330 | T8909 | T8910 | amod | chemotactic,factors |
| R7331 | T8910 | T8907 | conj | factors,LPS |
| R7332 | T8911 | T8910 | punct | ",",factors |
| R7333 | T8912 | T8915 | amod | NF-κB,phosphorylates |
| R7334 | T8913 | T8915 | amod | inducible,phosphorylates |
| R7335 | T8914 | T8915 | compound | kinase,phosphorylates |
| R7336 | T8915 | T8910 | conj | phosphorylates,factors |
| R7337 | T8916 | T8915 | cc | and,phosphorylates |
| R7338 | T8917 | T8917 | ROOT | activates,activates |
| R7339 | T8918 | T8920 | det | the,kinase |
| R7340 | T8919 | T8920 | amod | I-κB,kinase |
| R7341 | T8920 | T8917 | dobj | kinase,activates |
| R7342 | T8921 | T8920 | punct | (,kinase |
| R7343 | T8922 | T8920 | appos | IKK,kinase |
| R7344 | T8923 | T8920 | punct | ),kinase |
| R7345 | T8924 | T8925 | amod | complex,consisting |
| R7346 | T8925 | T8917 | advcl | consisting,activates |
| R7347 | T8926 | T8925 | prep | of,consisting |
| R7348 | T8927 | T8926 | pobj | IKK-1,of |
| R7349 | T8928 | T8927 | cc | and,IKK-1 |
| R7350 | T8929 | T8927 | conj | IKK-2,IKK-1 |
| R7351 | T8930 | T8927 | punct | ",",IKK-1 |
| R7352 | T8931 | T8934 | nsubj | which,phosphorylates |
| R7353 | T8932 | T8934 | prep | in,phosphorylates |
| R7354 | T8933 | T8932 | pobj | turn,in |
| R7355 | T8934 | T8927 | relcl | phosphorylates,IKK-1 |
| R7356 | T8935 | T8937 | det | the,subunit |
| R7357 | T8936 | T8937 | amod | I-κBα,subunit |
| R7358 | T8937 | T8934 | dobj | subunit,phosphorylates |
| R7359 | T8938 | T8917 | punct | .,activates |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9909 | 10-18 | http://purl.obolibrary.org/obo/GO_0007349 | denotes | cellular |
| T9910 | 107-125 | http://purl.obolibrary.org/obo/GO_1903721 | denotes | activates the I-κB |
| T9911 | 134-137 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
| T9912 | 161-164 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
| T9913 | 161-166 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK-1 |
| T9914 | 171-176 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK-2 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10045 | 134-137 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
| T10046 | 161-164 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK |
| T10047 | 161-166 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK-1 |
| T10048 | 171-176 | http://purl.obolibrary.org/obo/GO_0008384 | denotes | IKK-2 |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10082 | 134-146 | http://purl.obolibrary.org/obo/GO_0008385 | denotes | IKK) complex |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8386 | 0-225 | Sentence | denotes | Following cellular stimulation with LPS and chemotactic factors, NF-κB inducible kinase phosphorylates and activates the I-κB kinase (IKK) complex consisting of IKK-1 and IKK-2, which in turn phosphorylates the I-κBα subunit. |
| T142 | 0-225 | Sentence | denotes | Following cellular stimulation with LPS and chemotactic factors, NF-κB inducible kinase phosphorylates and activates the I-κB kinase (IKK) complex consisting of IKK-1 and IKK-2, which in turn phosphorylates the I-κBα subunit. |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10596 | 161-166 | Protein | denotes | IKK-1 |
| T10597 | 171-176 | Protein | denotes | IKK-2 |
| T10598 | 192-206 | Phosphorylation | denotes | phosphorylates |
| T10599 | 211-216 | Protein | denotes | I-κBα |
| R8450 | T10599 | T10598 | themeOf | I-κBα,phosphorylates |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10163 | 65-70 | Protein | denotes | NF-κB |
| T10164 | 121-132 | Protein | denotes | I-κB kinase |
| T10165 | 134-137 | Protein | denotes | IKK |
| T10166 | 161-166 | Protein | denotes | IKK-1 |
| T10167 | 171-176 | Protein | denotes | IKK-2 |
| T10168 | 211-224 | Protein | denotes | I-κBα subunit |
| T10169 | 71-80 | Positive_regulation | denotes | inducible |
| T10170 | 88-102 | Phosphorylation | denotes | phosphorylates |
| T10171 | 88-102 | Positive_regulation | denotes | phosphorylates |
| T10172 | 139-146 | Entity | denotes | complex |
| T10173 | 192-206 | Phosphorylation | denotes | phosphorylates |
| T10174 | 192-206 | Phosphorylation | denotes | phosphorylates |
| T10175 | 192-206 | Phosphorylation | denotes | phosphorylates |
| T10176 | 107-116 | Positive_regulation | denotes | activates |
| T10177 | 107-116 | Positive_regulation | denotes | activates |
| T10178 | 107-116 | Positive_regulation | denotes | activates |
| R8232 | T10163 | T10169 | themeOf | NF-κB,inducible |
| R8233 | T10163 | T10170 | themeOf | NF-κB,phosphorylates |
| R8235 | T10164 | T10173 | themeOf | I-κB kinase,phosphorylates |
| R8236 | T10164 | T10172 | partOf | I-κB kinase,complex |
| R8237 | T10165 | T10174 | themeOf | IKK,phosphorylates |
| R8238 | T10165 | T10172 | partOf | IKK,complex |
| R8239 | T10167 | T10172 | partOf | IKK-2,complex |
| R8240 | T10168 | T10175 | themeOf | I-κBα subunit,phosphorylates |
| R8242 | T10170 | T10171 | themeOf | phosphorylates,phosphorylates |
| R8244 | T10172 | T10173 | Site | complex,phosphorylates |
| R8245 | T10172 | T10174 | Site | complex,phosphorylates |
| R8246 | T10172 | T10175 | Site | complex,phosphorylates |
| R8247 | T10172 | T10176 | Site | complex,activates |
| R8248 | T10172 | T10177 | Site | complex,activates |
| R8249 | T10172 | T10178 | Site | complex,activates |
| R8250 | T10173 | T10176 | themeOf | phosphorylates,activates |
| R8251 | T10174 | T10177 | themeOf | phosphorylates,activates |
| R8252 | T10175 | T10178 | themeOf | phosphorylates,activates |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8210 | 161-166 | Protein | denotes | IKK-1 |
| T8211 | 171-176 | Protein | denotes | IKK-2 |
| T8212 | 192-206 | Phosphorylation | denotes | phosphorylates |
| T8213 | 211-216 | Protein | denotes | I-κBα |
| R6734 | T8213 | T8212 | themeOf | I-κBα,phosphorylates |