PMC:2664230 / 15943-16063
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7379 | 0-2 | TO | denotes | To |
T7380 | 3-12 | VB | denotes | determine |
T7381 | 13-15 | IN | denotes | if |
T7382 | 16-24 | NN | denotes | CREB-DNA |
T7383 | 25-32 | NN | denotes | binding |
T7384 | 33-36 | VB | denotes | was |
T7385 | 37-45 | VB | denotes | affected |
T7386 | 46-48 | IN | denotes | by |
T7387 | 49-52 | NN | denotes | PTX |
T7388 | 53-55 | IN | denotes | in |
T7389 | 56-57 | DT | denotes | a |
T7390 | 58-64 | NN | denotes | manner |
T7391 | 65-72 | JJ | denotes | similar |
T7392 | 73-75 | TO | denotes | to |
T7393 | 76-80 | NN | denotes | CREB |
T7394 | 81-96 | NN | denotes | phosphorylation |
T7395 | 96-97 | -COMMA- | denotes | , |
T7396 | 98-100 | DT | denotes | an |
T7397 | 101-105 | NN | denotes | EMSA |
T7398 | 106-109 | VB | denotes | was |
T7399 | 110-119 | VB | denotes | performed |
R6163 | T7380 | T7379 | arg1Of | determine,To |
R6164 | T7383 | T7382 | arg1Of | binding,CREB-DNA |
R6165 | T7383 | T7384 | arg1Of | binding,was |
R6166 | T7383 | T7385 | arg2Of | binding,affected |
R6167 | T7385 | T7380 | arg2Of | affected,determine |
R6168 | T7385 | T7381 | arg1Of | affected,if |
R6169 | T7385 | T7384 | arg2Of | affected,was |
R6170 | T7385 | T7388 | arg1Of | affected,in |
R6171 | T7387 | T7385 | arg1Of | PTX,affected |
R6172 | T7387 | T7386 | arg2Of | PTX,by |
R6173 | T7390 | T7388 | arg2Of | manner,in |
R6174 | T7390 | T7389 | arg1Of | manner,a |
R6175 | T7390 | T7391 | arg1Of | manner,similar |
R6176 | T7391 | T7392 | arg1Of | similar,to |
R6177 | T7394 | T7392 | arg2Of | phosphorylation,to |
R6178 | T7394 | T7393 | arg1Of | phosphorylation,CREB |
R6179 | T7397 | T7396 | arg1Of | EMSA,an |
R6180 | T7397 | T7398 | arg1Of | EMSA,was |
R6181 | T7397 | T7399 | arg2Of | EMSA,performed |
R6182 | T7399 | T7379 | modOf | performed,To |
R6183 | T7399 | T7395 | arg1Of | performed,"," |
R6184 | T7399 | T7398 | arg2Of | performed,was |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7217 | 0-2 | TO | denotes | To |
T7218 | 3-12 | VB | denotes | determine |
T7219 | 13-15 | IN | denotes | if |
T7220 | 16-24 | NNP | denotes | CREB-DNA |
T7221 | 25-32 | JJ | denotes | binding |
T7222 | 33-36 | VBD | denotes | was |
T7223 | 37-45 | VBN | denotes | affected |
T7224 | 46-48 | IN | denotes | by |
T7225 | 49-52 | NNP | denotes | PTX |
T7226 | 53-55 | IN | denotes | in |
T7227 | 56-57 | DT | denotes | a |
T7228 | 58-64 | NN | denotes | manner |
T7229 | 65-72 | JJ | denotes | similar |
T7230 | 73-75 | TO | denotes | to |
T7231 | 76-80 | NNP | denotes | CREB |
T7232 | 81-96 | NN | denotes | phosphorylation |
T7233 | 96-97 | , | denotes | , |
T7234 | 98-100 | DT | denotes | an |
T7235 | 101-105 | NNP | denotes | EMSA |
T7236 | 106-109 | VBD | denotes | was |
T7237 | 110-119 | VBN | denotes | performed |
T7238 | 119-120 | . | denotes | . |
R6002 | T7217 | T7218 | aux | To,determine |
R6003 | T7218 | T7237 | advcl | determine,performed |
R6004 | T7219 | T7223 | mark | if,affected |
R6005 | T7220 | T7221 | compound | CREB-DNA,binding |
R6006 | T7221 | T7223 | nsubjpass | binding,affected |
R6007 | T7222 | T7223 | auxpass | was,affected |
R6008 | T7223 | T7237 | advcl | affected,performed |
R6009 | T7224 | T7223 | agent | by,affected |
R6010 | T7225 | T7224 | pobj | PTX,by |
R6011 | T7226 | T7223 | prep | in,affected |
R6012 | T7227 | T7228 | det | a,manner |
R6013 | T7228 | T7226 | pobj | manner,in |
R6014 | T7229 | T7228 | amod | similar,manner |
R6015 | T7230 | T7229 | prep | to,similar |
R6016 | T7231 | T7232 | compound | CREB,phosphorylation |
R6017 | T7232 | T7230 | pobj | phosphorylation,to |
R6018 | T7233 | T7237 | punct | ",",performed |
R6019 | T7234 | T7235 | det | an,EMSA |
R6020 | T7235 | T7237 | nsubjpass | EMSA,performed |
R6021 | T7236 | T7237 | auxpass | was,performed |
R6022 | T7237 | T7237 | ROOT | performed,performed |
R6023 | T7238 | T7237 | punct | .,performed |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7491 | 81-96 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7498 | 21-32 | http://purl.obolibrary.org/obo/GO_0003677 | denotes | DNA binding |
T7500 | 25-32 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7089 | 0-120 | Sentence | denotes | To determine if CREB-DNA binding was affected by PTX in a manner similar to CREB phosphorylation, an EMSA was performed. |
T123 | 0-120 | Sentence | denotes | To determine if CREB-DNA binding was affected by PTX in a manner similar to CREB phosphorylation, an EMSA was performed. |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7523 | 16-24 | Protein | denotes | CREB-DNA |
T7524 | 49-52 | Protein | denotes | PTX |
T7525 | 76-80 | Protein | denotes | CREB |
T7526 | 25-32 | Binding | denotes | binding |
T7527 | 37-45 | Regulation | denotes | affected |
T7528 | 81-96 | Phosphorylation | denotes | phosphorylation |
R6216 | T7523 | T7526 | themeOf | CREB-DNA,binding |
R6217 | T7524 | T7527 | causeOf | PTX,affected |
R6218 | T7525 | T7528 | themeOf | CREB,phosphorylation |
R6219 | T7526 | T7527 | themeOf | binding,affected |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7460 | 16-20 | Q8TEY5 | denotes | CREB |
T7461 | 16-20 | Q02930 | denotes | CREB |
T7462 | 16-20 | P18848 | denotes | CREB |
T7463 | 16-20 | P16220 | denotes | CREB |
T7464 | 16-20 | P15336 | denotes | CREB |
T7465 | 16-20 | O43889 | denotes | CREB |
T7466 | 76-80 | Q8TEY5 | denotes | CREB |
T7467 | 76-80 | Q02930 | denotes | CREB |
T7468 | 76-80 | P18848 | denotes | CREB |
T7469 | 76-80 | P16220 | denotes | CREB |
T7470 | 76-80 | P15336 | denotes | CREB |
T7471 | 76-80 | O43889 | denotes | CREB |