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PMC:2664230 / 13906-14028 JSONTXT

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bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T6233 47-52 Protein denotes TNF-α
T6234 53-63 Gene_expression denotes production
T6235 74-85 Positive_regulation denotes stimulation
R5182 T6233 T6234 themeOf TNF-α,production
R5183 T6234 T6235 themeOf production,stimulation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6301 0-2 TO denotes To
T6302 3-12 VB denotes determine
T6303 13-16 DT denotes the
T6304 17-25 NN denotes duration
T6305 26-28 IN denotes of
T6306 29-32 NN denotes PDE
T6307 33-43 NN denotes inhibition
T6308 44-46 IN denotes on
T6309 47-52 NN denotes TNF-α
T6310 53-63 NN denotes production
T6311 64-69 IN denotes after
T6312 70-73 NN denotes LPS
T6313 74-85 NN denotes stimulation
T6314 85-86 -COMMA- denotes ,
T6315 87-91 NN denotes time
T6316 92-98 NN denotes course
T6317 99-106 NN denotes studies
T6318 107-111 VB denotes were
T6319 112-121 VB denotes conducted
R5244 T6302 T6301 arg1Of determine,To
R5245 T6302 T6311 arg1Of determine,after
R5246 T6304 T6302 arg2Of duration,determine
R5247 T6304 T6303 arg1Of duration,the
R5248 T6304 T6305 arg1Of duration,of
R5249 T6304 T6308 arg1Of duration,on
R5250 T6307 T6305 arg2Of inhibition,of
R5251 T6307 T6306 arg1Of inhibition,PDE
R5252 T6310 T6308 arg2Of production,on
R5253 T6310 T6309 arg1Of production,TNF-α
R5254 T6313 T6311 arg2Of stimulation,after
R5255 T6313 T6312 arg1Of stimulation,LPS
R5256 T6317 T6315 arg1Of studies,time
R5257 T6317 T6316 arg1Of studies,course
R5258 T6317 T6318 arg1Of studies,were
R5259 T6317 T6319 arg2Of studies,conducted
R5260 T6319 T6301 modOf conducted,To
R5261 T6319 T6314 arg1Of conducted,","
R5262 T6319 T6318 arg2Of conducted,were

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6250 0-2 TO denotes To
T6251 3-12 VB denotes determine
T6252 13-16 DT denotes the
T6253 17-25 NN denotes duration
T6254 26-28 IN denotes of
T6255 29-32 NNP denotes PDE
T6256 33-43 NN denotes inhibition
T6257 44-46 IN denotes on
T6258 47-52 JJ denotes TNF-α
T6259 53-63 NN denotes production
T6260 64-69 IN denotes after
T6261 70-73 NNP denotes LPS
T6262 74-85 NN denotes stimulation
T6263 85-86 , denotes ,
T6264 87-91 NN denotes time
T6265 92-98 NN denotes course
T6266 99-106 NNS denotes studies
T6267 107-111 VBD denotes were
T6268 112-121 VBN denotes conducted
T6269 121-122 . denotes .
R5194 T6250 T6251 aux To,determine
R5195 T6251 T6251 ROOT determine,determine
R5196 T6252 T6253 det the,duration
R5197 T6253 T6251 dobj duration,determine
R5198 T6254 T6253 prep of,duration
R5199 T6255 T6256 compound PDE,inhibition
R5200 T6256 T6254 pobj inhibition,of
R5201 T6257 T6256 prep on,inhibition
R5202 T6258 T6259 amod TNF-α,production
R5203 T6259 T6257 pobj production,on
R5204 T6260 T6251 prep after,determine
R5205 T6261 T6262 compound LPS,stimulation
R5206 T6262 T6260 pobj stimulation,after
R5207 T6263 T6268 punct ",",conducted
R5208 T6264 T6268 npadvmod time,conducted
R5209 T6265 T6266 compound course,studies
R5210 T6266 T6268 nsubjpass studies,conducted
R5211 T6267 T6268 auxpass were,conducted
R5212 T6268 T6251 advcl conducted,determine
R5213 T6269 T6251 punct .,determine

GO-BP

Id Subject Object Predicate Lexical cue
T6352 47-63 http://purl.obolibrary.org/obo/GO_0032680 denotes TNF-α production
T6355 47-63 http://purl.obolibrary.org/obo/GO_0032640 denotes TNF-α production
T6357 29-32 http://purl.obolibrary.org/obo/GO_0004114 denotes PDE
T6358 33-52 http://purl.obolibrary.org/obo/GO_1904468 denotes inhibition on TNF-α

GO-MF

Id Subject Object Predicate Lexical cue
T6369 29-32 http://purl.obolibrary.org/obo/GO_0004114 denotes PDE

sentences

Id Subject Object Predicate Lexical cue
T6240 0-122 Sentence denotes To determine the duration of PDE inhibition on TNF-α production after LPS stimulation, time course studies were conducted.
T107 0-122 Sentence denotes To determine the duration of PDE inhibition on TNF-α production after LPS stimulation, time course studies were conducted.

events-check-again

Id Subject Object Predicate Lexical cue
T6415 47-52 Protein denotes TNF-α
T6416 53-63 Gene_expression denotes production
T6417 74-85 Positive_regulation denotes stimulation
R5323 T6415 T6416 themeOf TNF-α,production
R5324 T6416 T6417 themeOf production,stimulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6375 29-32 Protein denotes PDE
T6376 47-52 Protein denotes TNF-α
T6377 33-43 Negative_regulation denotes inhibition
T6378 53-63 Gene_expression denotes production
R5296 T6375 T6377 themeOf PDE,inhibition
R5297 T6376 T6378 themeOf TNF-α,production

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6344 47-50 P01375 denotes TNF
T6345 47-52 P01375 denotes TNF-α

test2

Id Subject Object Predicate Lexical cue
T6223 33-43 Negative_regulation denotes inhibition
T6224 47-52 Protein denotes TNF-α
T6225 53-63 Gene_expression denotes production
R5175 T6224 T6225 themeOf TNF-α,production
R5176 T6225 T6223 themeOf production,inhibition