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PMC:194730 / 19400-20405 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5313 0-3 JJ denotes Red
T5314 10-15 NNS denotes cells
T5315 4-9 NN denotes blood
T5316 78-83 VBN denotes shown
T5317 15-17 , denotes ,
T5318 17-22 WDT denotes which
T5319 28-35 VBN denotes thought
T5320 23-27 VBD denotes were
T5321 36-38 TO denotes to
T5322 39-41 VB denotes be
T5323 42-48 JJ denotes devoid
T5324 49-51 IN denotes of
T5325 52-59 NN denotes annexin
T5326 60-62 NN denotes A7
T5327 62-64 , denotes ,
T5328 64-68 VBD denotes were
T5329 69-77 RB denotes recently
T5330 84-86 TO denotes to
T5331 87-93 VB denotes harbor
T5332 94-97 DT denotes the
T5333 105-112 NN denotes isoform
T5334 98-100 CD denotes 47
T5335 101-104 NN denotes kDa
T5336 113-121 RB denotes together
T5337 122-126 IN denotes with
T5338 127-130 PRP$ denotes its
T5339 139-146 NN denotes partner
T5340 131-138 VBG denotes binding
T5341 147-153 NN denotes sorcin
T5342 154-155 -LRB- denotes [
T5343 155-156 CD denotes 7
T5344 156-157 -RRB- denotes ]
T5345 157-158 . denotes .
T5346 158-282 sentence denotes We showed the presence of the 51 kDa isoform as well, adding red blood cells to the list of cells that harbor this isoform.
T5347 159-161 PRP denotes We
T5348 162-168 VBD denotes showed
T5349 169-172 DT denotes the
T5350 173-181 NN denotes presence
T5351 182-184 IN denotes of
T5352 185-188 DT denotes the
T5353 196-203 NN denotes isoform
T5354 189-191 CD denotes 51
T5355 192-195 NN denotes kDa
T5356 204-206 RB denotes as
T5357 207-211 RB denotes well
T5358 211-213 , denotes ,
T5359 213-219 VBG denotes adding
T5360 220-223 JJ denotes red
T5361 230-235 NNS denotes cells
T5362 224-229 NN denotes blood
T5363 236-238 IN denotes to
T5364 239-242 DT denotes the
T5365 243-247 NN denotes list
T5366 248-250 IN denotes of
T5367 251-256 NNS denotes cells
T5368 257-261 WDT denotes that
T5369 262-268 VBP denotes harbor
T5370 269-273 DT denotes this
T5371 274-281 NN denotes isoform
T5372 281-282 . denotes .
T5373 282-506 sentence denotes Salzer et al. [7] not only demonstrated the presence of annexin A7 in red blood cells, they also showed that annexin A7 and sorcin were enriched in membrane raft domains of nanovesicles formed from red blood cells in vitro.
T5374 283-289 NNP denotes Salzer
T5375 380-386 VBD denotes showed
T5376 290-292 FW denotes et
T5377 293-296 FW denotes al.
T5378 297-298 -LRB- denotes [
T5379 298-299 CD denotes 7
T5380 299-300 -RRB- denotes ]
T5381 301-304 RB denotes not
T5382 305-309 RB denotes only
T5383 310-322 VBD denotes demonstrated
T5384 323-326 DT denotes the
T5385 327-335 NN denotes presence
T5386 336-338 IN denotes of
T5387 339-346 NN denotes annexin
T5388 347-349 NN denotes A7
T5389 350-352 IN denotes in
T5390 353-356 JJ denotes red
T5391 363-368 NNS denotes cells
T5392 357-362 NN denotes blood
T5393 368-370 , denotes ,
T5394 370-374 PRP denotes they
T5395 375-379 RB denotes also
T5396 387-391 IN denotes that
T5397 414-418 VBD denotes were
T5398 392-399 NN denotes annexin
T5399 400-402 NN denotes A7
T5400 403-406 CC denotes and
T5401 407-413 NN denotes sorcin
T5402 419-427 JJ denotes enriched
T5403 428-430 IN denotes in
T5404 431-439 NN denotes membrane
T5405 440-444 NN denotes raft
T5406 445-452 NNS denotes domains
T5407 453-455 IN denotes of
T5408 456-468 NNS denotes nanovesicles
T5409 469-475 VBN denotes formed
T5410 476-480 IN denotes from
T5411 481-484 JJ denotes red
T5412 491-496 NNS denotes cells
T5413 485-490 NN denotes blood
T5414 497-499 FW denotes in
T5415 500-505 FW denotes vitro
T5416 505-506 . denotes .
T5417 506-625 sentence denotes Raft domains in general are considered key players in membrane organization and in mediating the vesiculation process.
T5418 507-511 NN denotes Raft
T5419 512-519 NNS denotes domains
T5420 535-545 VBN denotes considered
T5421 520-522 IN denotes in
T5422 523-530 JJ denotes general
T5423 531-534 VBP denotes are
T5424 546-549 JJ denotes key
T5425 550-557 NNS denotes players
T5426 558-560 IN denotes in
T5427 561-569 NN denotes membrane
T5428 570-582 NN denotes organization
T5429 583-586 CC denotes and
T5430 587-589 IN denotes in
T5431 590-599 VBG denotes mediating
T5432 600-603 DT denotes the
T5433 617-624 NN denotes process
T5434 604-616 NN denotes vesiculation
T5435 624-625 . denotes .
T5436 625-829 sentence denotes They result from the clustering of sphingolipids and cholesterol in the outer leaflet of the membrane connected to phospholipids and cholesterol in the inner leaflet and are enriched in special proteins.
T5437 626-630 PRP denotes They
T5438 631-637 VBP denotes result
T5439 638-642 IN denotes from
T5440 643-646 DT denotes the
T5441 647-657 NN denotes clustering
T5442 658-660 IN denotes of
T5443 661-674 NNS denotes sphingolipids
T5444 675-678 CC denotes and
T5445 679-690 NN denotes cholesterol
T5446 691-693 IN denotes in
T5447 694-697 DT denotes the
T5448 704-711 NN denotes leaflet
T5449 698-703 JJ denotes outer
T5450 712-714 IN denotes of
T5451 715-718 DT denotes the
T5452 719-727 NN denotes membrane
T5453 728-737 VBN denotes connected
T5454 738-740 IN denotes to
T5455 741-754 NNS denotes phospholipids
T5456 755-758 CC denotes and
T5457 759-770 NN denotes cholesterol
T5458 771-773 IN denotes in
T5459 774-777 DT denotes the
T5460 784-791 NN denotes leaflet
T5461 778-783 JJ denotes inner
T5462 792-795 CC denotes and
T5463 796-799 VBP denotes are
T5464 800-808 JJ denotes enriched
T5465 809-811 IN denotes in
T5466 812-819 JJ denotes special
T5467 820-828 NN denotes proteins
T5468 828-829 . denotes .
T5469 829-1005 sentence denotes Biochemically rafts are defined as membranes that are resistant to extraction by cold Triton X-100 and can be floated to low densities in sucrose gradient centrifugation [36].
T5470 830-843 RB denotes Biochemically
T5471 854-861 VBN denotes defined
T5472 844-849 NNS denotes rafts
T5473 850-853 VBP denotes are
T5474 862-864 IN denotes as
T5475 865-874 NNS denotes membranes
T5476 875-879 WDT denotes that
T5477 880-883 VBP denotes are
T5478 884-893 JJ denotes resistant
T5479 894-896 IN denotes to
T5480 897-907 NN denotes extraction
T5481 908-910 IN denotes by
T5482 911-915 JJ denotes cold
T5483 923-924 NN denotes X
T5484 916-922 NN denotes Triton
T5485 924-925 HYPH denotes -
T5486 925-928 CD denotes 100
T5487 929-932 CC denotes and
T5488 933-936 MD denotes can
T5489 940-947 VBN denotes floated
T5490 937-939 VB denotes be
T5491 948-950 IN denotes to
T5492 951-954 JJ denotes low
T5493 955-964 NNS denotes densities
T5494 965-967 IN denotes in
T5495 968-975 NN denotes sucrose
T5496 976-984 NN denotes gradient
T5497 985-999 NN denotes centrifugation
T5498 1000-1001 -LRB- denotes [
T5499 1001-1003 CD denotes 36
T5500 1003-1004 -RRB- denotes ]
T5501 1004-1005 . denotes .
R2858 T5313 T5314 amod Red,cells
R2859 T5314 T5316 nsubjpass cells,shown
R2860 T5315 T5314 compound blood,cells
R2861 T5317 T5314 punct ", ",cells
R2862 T5318 T5319 dep which,thought
R2863 T5319 T5314 relcl thought,cells
R2864 T5320 T5319 auxpass were,thought
R2865 T5321 T5322 aux to,be
R2866 T5322 T5319 xcomp be,thought
R2867 T5323 T5322 acomp devoid,be
R2868 T5324 T5323 prep of,devoid
R2869 T5325 T5326 compound annexin,A7
R2870 T5326 T5324 pobj A7,of
R2871 T5327 T5316 punct ", ",shown
R2872 T5328 T5316 auxpass were,shown
R2873 T5329 T5316 advmod recently,shown
R2874 T5330 T5331 aux to,harbor
R2875 T5331 T5316 xcomp harbor,shown
R2876 T5332 T5333 det the,isoform
R2877 T5333 T5331 dobj isoform,harbor
R2878 T5334 T5335 nummod 47,kDa
R2879 T5335 T5333 compound kDa,isoform
R2880 T5336 T5337 advmod together,with
R2881 T5337 T5333 prep with,isoform
R2882 T5338 T5339 poss its,partner
R2883 T5339 T5337 pobj partner,with
R2884 T5340 T5339 amod binding,partner
R2885 T5341 T5339 appos sorcin,partner
R2886 T5342 T5343 punct [,7
R2887 T5343 T5316 parataxis 7,shown
R2888 T5344 T5343 punct ],7
R2889 T5345 T5316 punct .,shown
R2890 T5347 T5348 nsubj We,showed
R2891 T5349 T5350 det the,presence
R2892 T5350 T5348 dobj presence,showed
R2893 T5351 T5350 prep of,presence
R2894 T5352 T5353 det the,isoform
R2895 T5353 T5351 pobj isoform,of
R2896 T5354 T5355 nummod 51,kDa
R2897 T5355 T5353 compound kDa,isoform
R2898 T5356 T5357 advmod as,well
R2899 T5357 T5348 advmod well,showed
R2900 T5358 T5348 punct ", ",showed
R2901 T5359 T5348 advcl adding,showed
R2902 T5360 T5361 amod red,cells
R2903 T5361 T5359 dobj cells,adding
R2904 T5362 T5361 compound blood,cells
R2905 T5363 T5359 prep to,adding
R2906 T5364 T5365 det the,list
R2907 T5365 T5363 pobj list,to
R2908 T5366 T5365 prep of,list
R2909 T5367 T5366 pobj cells,of
R2910 T5368 T5369 dep that,harbor
R2911 T5369 T5367 relcl harbor,cells
R2912 T5370 T5371 det this,isoform
R2913 T5371 T5369 dobj isoform,harbor
R2914 T5372 T5348 punct .,showed
R2915 T5374 T5375 ccomp Salzer,showed
R2916 T5376 T5377 advmod et,al.
R2917 T5377 T5374 advmod al.,Salzer
R2918 T5378 T5379 punct [,7
R2919 T5379 T5374 parataxis 7,Salzer
R2920 T5380 T5379 punct ],7
R2921 T5381 T5374 preconj not,Salzer
R2922 T5382 T5381 advmod only,not
R2923 T5383 T5374 conj demonstrated,Salzer
R2924 T5384 T5385 det the,presence
R2925 T5385 T5383 dobj presence,demonstrated
R2926 T5386 T5385 prep of,presence
R2927 T5387 T5388 compound annexin,A7
R2928 T5388 T5386 pobj A7,of
R2929 T5389 T5383 prep in,demonstrated
R2930 T5390 T5391 amod red,cells
R2931 T5391 T5389 pobj cells,in
R2932 T5392 T5391 compound blood,cells
R2933 T5393 T5375 punct ", ",showed
R2934 T5394 T5375 nsubj they,showed
R2935 T5395 T5375 advmod also,showed
R2936 T5396 T5397 mark that,were
R2937 T5397 T5375 ccomp were,showed
R2938 T5398 T5399 compound annexin,A7
R2939 T5399 T5397 nsubj A7,were
R2940 T5400 T5399 cc and,A7
R2941 T5401 T5399 conj sorcin,A7
R2942 T5402 T5397 acomp enriched,were
R2943 T5403 T5397 prep in,were
R2944 T5404 T5405 compound membrane,raft
R2945 T5405 T5406 compound raft,domains
R2946 T5406 T5403 pobj domains,in
R2947 T5407 T5406 prep of,domains
R2948 T5408 T5407 pobj nanovesicles,of
R2949 T5409 T5408 acl formed,nanovesicles
R2950 T5410 T5409 prep from,formed
R2951 T5411 T5412 amod red,cells
R2952 T5412 T5410 pobj cells,from
R2953 T5413 T5412 compound blood,cells
R2954 T5414 T5415 advmod in,vitro
R2955 T5415 T5409 advmod vitro,formed
R2956 T5416 T5375 punct .,showed
R2957 T5418 T5419 compound Raft,domains
R2958 T5419 T5420 nsubjpass domains,considered
R2959 T5421 T5420 prep in,considered
R2960 T5422 T5421 amod general,in
R2961 T5423 T5420 auxpass are,considered
R2962 T5424 T5425 amod key,players
R2963 T5425 T5420 oprd players,considered
R2964 T5426 T5425 prep in,players
R2965 T5427 T5428 compound membrane,organization
R2966 T5428 T5426 pobj organization,in
R2967 T5429 T5426 cc and,in
R2968 T5430 T5426 conj in,in
R2969 T5431 T5430 pcomp mediating,in
R2970 T5432 T5433 det the,process
R2971 T5433 T5431 dobj process,mediating
R2972 T5434 T5433 compound vesiculation,process
R2973 T5435 T5420 punct .,considered
R2974 T5437 T5438 nsubj They,result
R2975 T5439 T5438 prep from,result
R2976 T5440 T5441 det the,clustering
R2977 T5441 T5439 pobj clustering,from
R2978 T5442 T5441 prep of,clustering
R2979 T5443 T5442 pobj sphingolipids,of
R2980 T5444 T5443 cc and,sphingolipids
R2981 T5445 T5443 conj cholesterol,sphingolipids
R2982 T5446 T5441 prep in,clustering
R2983 T5447 T5448 det the,leaflet
R2984 T5448 T5446 pobj leaflet,in
R2985 T5449 T5448 amod outer,leaflet
R2986 T5450 T5448 prep of,leaflet
R2987 T5451 T5452 det the,membrane
R2988 T5452 T5450 pobj membrane,of
R2989 T5453 T5452 acl connected,membrane
R2990 T5454 T5453 prep to,connected
R2991 T5455 T5454 pobj phospholipids,to
R2992 T5456 T5455 cc and,phospholipids
R2993 T5457 T5455 conj cholesterol,phospholipids
R2994 T5458 T5453 prep in,connected
R2995 T5459 T5460 det the,leaflet
R2996 T5460 T5458 pobj leaflet,in
R2997 T5461 T5460 amod inner,leaflet
R2998 T5462 T5438 cc and,result
R2999 T5463 T5438 conj are,result
R3000 T5464 T5463 acomp enriched,are
R3001 T5465 T5463 prep in,are
R3002 T5466 T5467 amod special,proteins
R3003 T5467 T5465 pobj proteins,in
R3004 T5468 T5438 punct .,result
R3005 T5470 T5471 advmod Biochemically,defined
R3006 T5472 T5471 nsubjpass rafts,defined
R3007 T5473 T5471 auxpass are,defined
R3008 T5474 T5471 prep as,defined
R3009 T5475 T5474 pobj membranes,as
R3010 T5476 T5477 dep that,are
R3011 T5477 T5475 relcl are,membranes
R3012 T5478 T5477 acomp resistant,are
R3013 T5479 T5478 prep to,resistant
R3014 T5480 T5479 pobj extraction,to
R3015 T5481 T5480 prep by,extraction
R3016 T5482 T5483 amod cold,X
R3017 T5483 T5481 pobj X,by
R3018 T5484 T5483 compound Triton,X
R3019 T5485 T5483 punct -,X
R3020 T5486 T5483 nummod 100,X
R3021 T5487 T5471 cc and,defined
R3022 T5488 T5489 aux can,floated
R3023 T5489 T5471 conj floated,defined
R3024 T5490 T5489 auxpass be,floated
R3025 T5491 T5489 prep to,floated
R3026 T5492 T5493 amod low,densities
R3027 T5493 T5491 pobj densities,to
R3028 T5494 T5489 prep in,floated
R3029 T5495 T5496 compound sucrose,gradient
R3030 T5496 T5497 compound gradient,centrifugation
R3031 T5497 T5494 pobj centrifugation,in
R3032 T5498 T5499 punct [,36
R3033 T5499 T5489 parataxis 36,floated
R3034 T5500 T5499 punct ],36
R3035 T5501 T5471 punct .,defined

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4740 0-15 CL:0000232 denotes Red blood cells
T4741 4-9 UBERON:0000178 denotes blood
T4742 52-62 PR:000004080 denotes annexin A7
T4743 105-112 SO:0001060 denotes isoform
T4744 147-153 PR:000015619 denotes sorcin
T4745 196-203 SO:0001060 denotes isoform
T4746 220-235 CL:0000232 denotes red blood cells
T4747 224-229 UBERON:0000178 denotes blood
T4748 274-281 SO:0001060 denotes isoform
T4749 339-349 PR:000004080 denotes annexin A7
T4750 353-368 CL:0000232 denotes red blood cells
T4751 357-362 UBERON:0000178 denotes blood
T4752 392-402 PR:000004080 denotes annexin A7
T4753 407-413 PR:000015619 denotes sorcin
T4754 431-452 GO:0045121 denotes membrane raft domains
T4755 460-468 GO:0031982 denotes vesicles
T4756 481-496 CL:0000232 denotes red blood cells
T4757 485-490 UBERON:0000178 denotes blood
T4758 507-519 GO:0045121 denotes Raft domains
T4759 561-569 GO:0016020 denotes membrane
T4760 604-616 GO:0006900 denotes vesiculation
T4761 661-674 CHEBI:26739 denotes sphingolipids
T4762 679-690 CHEBI:16113 denotes cholesterol
T4764 704-714,719-727 GO:0097478 denotes leaflet of membrane
T4765 741-754 CHEBI:16247 denotes phospholipids
T4766 759-770 CHEBI:16113 denotes cholesterol
T4767 784-791 GO:0097478 denotes leaflet
T4768 844-849 GO:0045121 denotes rafts
T4769 865-874 GO:0016020 denotes membranes
T4770 916-928 CHEBI:9750 denotes Triton X-100
T4771 968-975 CHEBI:17992 denotes sucrose

2_test

Id Subject Object Predicate Lexical cue
12925238-11895795-8102404 155-156 11895795 denotes 7
12925238-11895795-8102405 298-299 11895795 denotes 7
12925238-12208858-8102406 1001-1003 12208858 denotes 36

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4958 0-15 CL:0000232 denotes Red blood cells
T4959 4-9 UBERON:0000178 denotes blood
T4960 10-15 CL_GO_EXT:cell denotes cells
T4961 52-62 PR_EXT:000004080 denotes annexin A7
T4962 105-112 SO_EXT:0001060 denotes isoform
T4963 131-138 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T4964 147-153 PR_EXT:000015619 denotes sorcin
T4965 196-203 SO_EXT:0001060 denotes isoform
T4966 220-235 CL:0000232 denotes red blood cells
T4967 224-229 UBERON:0000178 denotes blood
T4968 230-235 CL_GO_EXT:cell denotes cells
T4969 251-256 CL_GO_EXT:cell denotes cells
T4970 274-281 SO_EXT:0001060 denotes isoform
T4971 339-349 PR_EXT:000004080 denotes annexin A7
T4972 353-368 CL:0000232 denotes red blood cells
T4973 357-362 UBERON:0000178 denotes blood
T4974 363-368 CL_GO_EXT:cell denotes cells
T4975 392-402 PR_EXT:000004080 denotes annexin A7
T4976 407-413 PR_EXT:000015619 denotes sorcin
T4977 431-452 GO:0045121 denotes membrane raft domains
T4978 460-468 GO:0031982 denotes vesicles
T4979 481-496 CL:0000232 denotes red blood cells
T4980 485-490 UBERON:0000178 denotes blood
T4981 491-496 CL_GO_EXT:cell denotes cells
T4982 507-519 GO:0045121 denotes Raft domains
T4983 561-569 GO:0016020 denotes membrane
T4984 604-616 GO:0006900 denotes vesiculation
T4985 661-674 CHEBI:26739 denotes sphingolipids
T4986 679-690 CHEBI:16113 denotes cholesterol
T4988 704-714,719-727 GO:0097478 denotes leaflet of membrane
T4989 741-754 CHEBI:16247 denotes phospholipids
T4990 759-770 CHEBI:16113 denotes cholesterol
T4991 784-791 GO:0097478 denotes leaflet
T4992 820-828 CHEBI_PR_EXT:protein denotes proteins
T4993 830-843 CHEBI_EXT:biochemical denotes Biochemically
T4994 844-849 GO:0045121 denotes rafts
T4995 865-874 GO:0016020 denotes membranes
T4996 916-928 CHEBI:9750 denotes Triton X-100
T4997 968-975 CHEBI:17992 denotes sucrose