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PMC:1920263 / 1401-1658 JSONTXT

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test2

Id Subject Object Predicate Lexical cue
T41 17-20 Protein denotes Sp3
T751 209-217 Protein denotes APOBEC3A
T752 219-220 Protein denotes B
T753 222-223 Protein denotes C
T754 225-227 Protein denotes DE
T755 229-230 Protein denotes F
T756 232-233 Protein denotes G
T757 235-236 Protein denotes H

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T547 6-7 -LRB- denotes (
T548 7-9 NNP denotes Sp
T549 9-10 -RRB- denotes )
T550 11-12 CD denotes 1
T551 13-16 CC denotes and
T552 17-20 NNP denotes Sp3
T553 20-21 . denotes .
T1445 36-39 DT denotes The
T1446 40-48 RB denotes recently
T1447 49-59 VBN denotes discovered
T1448 60-67 NNP denotes APOBEC3
T1449 68-74 NN denotes family
T1450 75-77 IN denotes of
T1451 78-86 NN denotes cytidine
T1452 87-97 NNS denotes deaminases
T1453 98-100 VBZ denotes is
T1454 101-111 VBN denotes considered
T1455 112-114 TO denotes to
T1456 115-119 VB denotes play
T1457 120-122 DT denotes an
T1458 123-132 JJ denotes important
T1459 133-137 NN denotes role
T1460 138-140 IN denotes in
T1461 141-150 JJ denotes antiviral
T1462 151-160 JJ denotes intrinsic
T1463 161-169 NN denotes immunity
T1464 170-171 -LRB- denotes (
T1465 171-174 CD denotes 1,2
T1466 174-175 -RRB- denotes )
T1467 175-176 . denotes .
T1468 177-179 IN denotes In
T1469 180-188 NNS denotes primates
T1470 188-189 , denotes ,
T1471 190-193 DT denotes the
T1472 194-199 CD denotes seven
T1473 200-208 NNS denotes paralogs
T1474 209-217 NNP denotes APOBEC3A
T1475 217-218 , denotes ,
T1476 219-220 NNP denotes B
T1477 220-221 , denotes ,
T1478 222-223 NNP denotes C
T1479 223-224 , denotes ,
T1480 225-227 NNP denotes DE
T1481 227-228 , denotes ,
T1482 229-230 NN denotes F
T1483 230-231 , denotes ,
T1484 232-233 NNP denotes G
T1485 233-234 , denotes ,
T1486 235-236 NNP denotes H
T1487 237-238 -LRB- denotes (
T1488 238-243 NNP denotes A3A-H
T1489 243-244 -RRB- denotes )
T1490 245-249 VBP denotes have
T1491 250-254 VBN denotes been
R495 T547 T548 punct (,Sp
R498 T550 T549 nummod 1,)
R499 T551 T550 cc and,1
R500 T552 T550 conj Sp3,1
R1194 T1445 T1449 det The,family
R1195 T1446 T1447 advmod recently,discovered
R1196 T1447 T1449 amod discovered,family
R1197 T1448 T1449 compound APOBEC3,family
R1198 T1449 T1454 nsubjpass family,considered
R1199 T1450 T1449 prep of,family
R1200 T1451 T1452 compound cytidine,deaminases
R1201 T1452 T1450 pobj deaminases,of
R1202 T1453 T1454 auxpass is,considered
R1203 T1454 T1454 ROOT considered,considered
R1204 T1455 T1456 aux to,play
R1205 T1456 T1454 xcomp play,considered
R1206 T1457 T1459 det an,role
R1207 T1458 T1459 amod important,role
R1208 T1459 T1456 dobj role,play
R1209 T1460 T1456 prep in,play
R1210 T1461 T1463 amod antiviral,immunity
R1211 T1462 T1463 amod intrinsic,immunity
R1212 T1463 T1460 pobj immunity,in
R1213 T1464 T1463 punct (,immunity
R1214 T1465 T1463 appos "1,2",immunity
R1215 T1466 T1463 punct ),immunity
R1216 T1467 T1454 punct .,considered
R1218 T1469 T1468 pobj primates,In
R1220 T1471 T1473 det the,paralogs
R1221 T1472 T1473 nummod seven,paralogs
R1223 T1474 T1473 conj APOBEC3A,paralogs
R1224 T1475 T1474 punct ",",APOBEC3A
R1225 T1476 T1474 conj B,APOBEC3A
R1226 T1477 T1476 punct ",",B
R1227 T1478 T1476 conj C,B
R1228 T1479 T1478 punct ",",C
R1229 T1480 T1478 conj DE,C
R1230 T1481 T1480 punct ",",DE
R1231 T1482 T1478 conj F,C
R1232 T1483 T1482 punct ",",F
R1233 T1484 T1482 conj G,F
R1234 T1485 T1484 punct ",",G
R1236 T1487 T1488 punct (,A3A-H
R1237 T1488 T1486 appos A3A-H,H
R1238 T1489 T1486 punct ),H

sentences

Id Subject Object Predicate Lexical cue
T848 36-176 Sentence denotes The recently discovered APOBEC3 family of cytidine deaminases is considered to play an important role in antiviral intrinsic immunity (1,2).
T11 23-35 Sentence denotes INTRODUCTION
T12 36-176 Sentence denotes The recently discovered APOBEC3 family of cytidine deaminases is considered to play an important role in antiviral intrinsic immunity (1,2).

2_test

Id Subject Object Predicate Lexical cue
17517765-16611054-77155574 171-172 16611054 denotes 1
17517765-16407183-77155575 173-174 16407183 denotes 2

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T287 6-7 -LRB- denotes (
T288 7-9 NN denotes Sp
T289 9-10 -RRB- denotes )
T290 11-12 CD denotes 1
T291 13-16 CC denotes and
T292 17-20 NN denotes Sp3
T881 36-39 DT denotes The
T882 40-48 RB denotes recently
T883 49-59 VB denotes discovered
T884 60-67 NN denotes APOBEC3
T885 68-74 NN denotes family
T886 75-77 IN denotes of
T887 78-86 NN denotes cytidine
T888 87-97 NN denotes deaminases
T889 98-100 VB denotes is
T890 101-111 VB denotes considered
T891 112-114 TO denotes to
T892 115-119 VB denotes play
T893 120-122 DT denotes an
T894 123-132 JJ denotes important
T895 133-137 NN denotes role
T896 138-140 IN denotes in
T897 141-150 JJ denotes antiviral
T898 151-160 JJ denotes intrinsic
T899 161-169 NN denotes immunity
T900 170-171 -LRB- denotes (
T901 171-174 CD denotes 1,2
T902 174-175 -RRB- denotes )
T903 177-179 IN denotes In
T904 180-188 NN denotes primates
T905 188-189 -COMMA- denotes ,
T906 190-193 DT denotes the
T907 194-199 CD denotes seven
T908 200-208 NN denotes paralogs
T909 209-217 NN denotes APOBEC3A
T910 217-218 -COMMA- denotes ,
T911 219-220 NN denotes B
T912 220-221 -COMMA- denotes ,
T913 222-223 NN denotes C
T914 223-224 -COMMA- denotes ,
T915 225-227 NNP denotes DE
T916 227-228 -COMMA- denotes ,
T917 229-230 NN denotes F
T918 230-231 -COMMA- denotes ,
T919 232-233 NN denotes G
T920 233-234 -COMMA- denotes ,
T921 235-236 NN denotes H
T922 237-238 -LRB- denotes (
T923 238-243 NN denotes A3A-H
T924 243-244 -RRB- denotes )
T925 245-249 VB denotes have
T926 250-254 VB denotes been
R262 T288 T287 arg2Of Sp,(
R263 T289 T287 arg3Of ),(
R265 T292 T291 arg2Of Sp3,and
R658 T883 T882 arg1Of discovered,recently
R659 T885 T881 arg1Of family,The
R660 T885 T883 arg1Of family,discovered
R661 T885 T884 arg1Of family,APOBEC3
R662 T885 T886 arg1Of family,of
R663 T885 T889 arg1Of family,is
R664 T885 T890 arg2Of family,considered
R665 T885 T892 arg1Of family,play
R666 T888 T886 arg2Of deaminases,of
R667 T888 T887 arg1Of deaminases,cytidine
R668 T890 T889 arg2Of considered,is
R669 T892 T890 arg3Of play,considered
R670 T892 T891 arg1Of play,to
R671 T892 T896 arg1Of play,in
R672 T895 T892 arg2Of role,play
R673 T895 T893 arg1Of role,an
R674 T895 T894 arg1Of role,important
R675 T899 T896 arg2Of immunity,in
R676 T899 T897 arg1Of immunity,antiviral
R677 T899 T898 arg1Of immunity,intrinsic
R678 T899 T900 arg1Of immunity,(
R679 T901 T900 arg2Of "1,2",(
R680 T902 T900 arg3Of ),(
R681 T904 T903 arg2Of primates,In
R682 T908 T906 arg1Of paralogs,the
R683 T908 T907 arg1Of paralogs,seven
R684 T909 T910 arg1Of APOBEC3A,","
R685 T910 T912 arg1Of ",",","
R686 T911 T910 arg2Of B,","
R687 T912 T914 arg1Of ",",","
R688 T913 T912 arg2Of C,","
R689 T914 T916 arg1Of ",",","
R690 T915 T914 arg2Of DE,","
R691 T916 T918 arg1Of ",",","
R692 T917 T916 arg2Of F,","
R693 T918 T920 arg1Of ",",","
R694 T919 T918 arg2Of G,","
R695 T920 T908 arg1Of ",",paralogs
R696 T920 T925 arg1Of ",",have
R697 T920 T926 arg1Of ",",been
R699 T921 T920 arg2Of H,","
R700 T921 T922 arg1Of H,(
R701 T923 T922 arg2Of A3A-H,(
R702 T924 T922 arg3Of ),(

events-check-again

Id Subject Object Predicate Lexical cue
T677 17-20 Protein denotes Sp3
T2231 209-217 Protein denotes APOBEC3A
T2232 219-220 Protein denotes B
T2233 222-223 Protein denotes C
T2234 225-227 Protein denotes DE
T2235 229-230 Protein denotes F
T2236 232-233 Protein denotes G
T2237 235-236 Protein denotes H

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T697 17-20 Protein denotes Sp3
T2281 60-74 Protein denotes APOBEC3 family
T2282 78-97 Protein denotes cytidine deaminases

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T63 17-20 Protein denotes Sp3
T798 209-217 Protein denotes APOBEC3A
T799 219-220 Protein denotes B
T800 222-223 Protein denotes C
T801 225-227 Protein denotes DE
T802 229-230 Protein denotes F
T803 232-233 Protein denotes G
T804 235-236 Protein denotes H

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T308 17-20 Q02447 denotes Sp3