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PMC:1853120 / 29611-30105 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T30819 82-88 VBN denotes spread
T30820 89-92 CC denotes and
T30803 0-2 NN denotes XY
T30804 3-7 NN denotes Body
T30805 8-13 VBZ denotes Forms
T30806 14-22 RB denotes Normally
T30807 23-29 IN denotes during
T30808 30-39 NN denotes Pachynema
T30809 40-42 IN denotes in
T30810 43-48 NN denotes Dmrt7
T30811 49-55 NN denotes Mutant
T30812 56-60 NNS denotes Mice
T30813 60-150 sentence denotes (A) Testicular cells spread and stained with antibodies to γH2AX (red) and SYCP3 (green).
T30814 61-62 -LRB- denotes (
T30815 76-81 NNS denotes cells
T30816 62-63 LS denotes A
T30817 63-64 -RRB- denotes )
T30818 65-75 JJ denotes Testicular
T30821 93-100 VBN denotes stained
T30822 101-105 IN denotes with
T30823 106-116 NNS denotes antibodies
T30824 117-119 IN denotes to
T30825 120-125 NN denotes γH2AX
T30826 126-127 -LRB- denotes (
T30827 127-130 JJ denotes red
T30828 130-131 -RRB- denotes )
T30829 132-135 CC denotes and
T30830 136-141 NN denotes SYCP3
T30831 142-143 -LRB- denotes (
T30832 143-148 JJ denotes green
T30833 148-149 -RRB- denotes )
T30834 149-150 . denotes .
T30835 150-243 sentence denotes In pachytene cells, γH2AX is concentrated in the XY body both in wild-type and Dmrt7 mutant.
T30836 151-153 IN denotes In
T30837 180-192 VBN denotes concentrated
T30838 154-163 NN denotes pachytene
T30839 164-169 NNS denotes cells
T30840 169-171 , denotes ,
T30841 171-176 NN denotes γH2AX
T30842 177-179 VBZ denotes is
T30843 193-195 IN denotes in
T30844 196-199 DT denotes the
T30845 203-207 NN denotes body
T30846 200-202 NN denotes XY
T30847 208-212 CC denotes both
T30848 213-215 IN denotes in
T30849 216-220 JJ denotes wild
T30850 221-225 NN denotes type
T30851 220-221 HYPH denotes -
T30852 226-229 CC denotes and
T30853 230-235 NN denotes Dmrt7
T30854 236-242 NN denotes mutant
T30855 242-243 . denotes .
T30856 243-325 sentence denotes (B) Testes from 6-wk-old mice sectioned and stained with antibody to γH2AX (red).
T30857 244-245 -LRB- denotes (
T30858 245-246 LS denotes B
T30859 248-254 NNS denotes Testes
T30860 246-247 -RRB- denotes )
T30861 255-259 IN denotes from
T30862 260-261 CD denotes 6
T30863 262-264 NN denotes wk
T30864 261-262 HYPH denotes -
T30865 265-268 JJ denotes old
T30866 264-265 HYPH denotes -
T30867 269-273 NNS denotes mice
T30868 274-283 VBN denotes sectioned
T30869 284-287 CC denotes and
T30870 288-295 VBN denotes stained
T30871 296-300 IN denotes with
T30872 301-309 NN denotes antibody
T30873 310-312 IN denotes to
T30874 313-318 NN denotes γH2AX
T30875 319-320 -LRB- denotes (
T30876 320-323 JJ denotes red
T30877 323-324 -RRB- denotes )
T30878 324-325 . denotes .
T30879 325-410 sentence denotes (C) Testes from 6-wk-old mice sectioned and stained with antibody to SUMO-1 (green).
T30880 326-327 -LRB- denotes (
T30881 327-328 LS denotes C
T30882 330-336 NNS denotes Testes
T30883 328-329 -RRB- denotes )
T30884 337-341 IN denotes from
T30885 342-343 CD denotes 6
T30886 344-346 NN denotes wk
T30887 343-344 HYPH denotes -
T30888 347-350 JJ denotes old
T30889 346-347 HYPH denotes -
T30890 351-355 NNS denotes mice
T30891 356-365 VBN denotes sectioned
T30892 366-369 CC denotes and
T30893 370-377 VBN denotes stained
T30894 378-382 IN denotes with
T30895 383-391 NN denotes antibody
T30896 392-394 IN denotes to
T30897 395-399 NN denotes SUMO
T30898 399-400 HYPH denotes -
T30899 400-401 CD denotes 1
T30900 402-403 -LRB- denotes (
T30901 403-408 JJ denotes green
T30902 408-409 -RRB- denotes )
T30903 409-410 . denotes .
T30904 410-494 sentence denotes Abundant pachytene cells with XY bodies are present in wild-type and mutant testes.
T30905 411-419 JJ denotes Abundant
T30906 430-435 NNS denotes cells
T30907 420-429 NN denotes pachytene
T30908 451-454 VBP denotes are
T30909 436-440 IN denotes with
T30910 441-443 NN denotes XY
T30911 444-450 NNS denotes bodies
T30912 455-462 JJ denotes present
T30913 463-465 IN denotes in
T30914 466-470 JJ denotes wild
T30915 471-475 NN denotes type
T30916 470-471 HYPH denotes -
T30917 487-493 NNS denotes testes
T30918 476-479 CC denotes and
T30919 480-486 NN denotes mutant
T30920 493-494 . denotes .
R8594 T30803 T30804 compound XY,Body
R8595 T30804 T30805 nsubj Body,Forms
R8596 T30806 T30805 advmod Normally,Forms
R8597 T30807 T30805 prep during,Forms
R8598 T30808 T30807 pobj Pachynema,during
R8599 T30809 T30805 prep in,Forms
R8600 T30810 T30811 compound Dmrt7,Mutant
R8601 T30811 T30812 compound Mutant,Mice
R8602 T30812 T30809 pobj Mice,in
R8603 T30814 T30815 punct (,cells
R8604 T30816 T30815 meta A,cells
R8605 T30817 T30815 punct ),cells
R8606 T30818 T30815 amod Testicular,cells
R8607 T30819 T30815 acl spread,cells
R8608 T30820 T30819 cc and,spread
R8609 T30821 T30819 conj stained,spread
R8610 T30822 T30821 prep with,stained
R8611 T30823 T30822 pobj antibodies,with
R8612 T30824 T30823 prep to,antibodies
R8613 T30825 T30824 pobj γH2AX,to
R8614 T30826 T30827 punct (,red
R8615 T30827 T30825 parataxis red,γH2AX
R8616 T30828 T30827 punct ),red
R8617 T30829 T30825 cc and,γH2AX
R8618 T30830 T30825 conj SYCP3,γH2AX
R8619 T30831 T30832 punct (,green
R8620 T30832 T30830 parataxis green,SYCP3
R8621 T30833 T30832 punct ),green
R8622 T30834 T30815 punct .,cells
R8623 T30836 T30837 prep In,concentrated
R8624 T30838 T30839 compound pachytene,cells
R8625 T30839 T30836 pobj cells,In
R8626 T30840 T30837 punct ", ",concentrated
R8627 T30841 T30837 nsubjpass γH2AX,concentrated
R8628 T30842 T30837 auxpass is,concentrated
R8629 T30843 T30837 prep in,concentrated
R8630 T30844 T30845 det the,body
R8631 T30845 T30843 pobj body,in
R8632 T30846 T30845 compound XY,body
R8633 T30847 T30848 preconj both,in
R8634 T30848 T30837 prep in,concentrated
R8635 T30849 T30850 amod wild,type
R8636 T30850 T30848 pobj type,in
R8637 T30851 T30850 punct -,type
R8638 T30852 T30850 cc and,type
R8639 T30853 T30854 compound Dmrt7,mutant
R8640 T30854 T30850 conj mutant,type
R8641 T30855 T30837 punct .,concentrated
R8642 T30857 T30858 punct (,B
R8643 T30858 T30859 meta B,Testes
R8644 T30860 T30858 punct ),B
R8645 T30861 T30859 prep from,Testes
R8646 T30862 T30863 nummod 6,wk
R8647 T30863 T30865 npadvmod wk,old
R8648 T30864 T30863 punct -,wk
R8649 T30865 T30867 amod old,mice
R8650 T30866 T30865 punct -,old
R8651 T30867 T30861 pobj mice,from
R8652 T30868 T30859 acl sectioned,Testes
R8653 T30869 T30868 cc and,sectioned
R8654 T30870 T30868 conj stained,sectioned
R8655 T30871 T30870 prep with,stained
R8656 T30872 T30871 pobj antibody,with
R8657 T30873 T30872 prep to,antibody
R8658 T30874 T30873 pobj γH2AX,to
R8659 T30875 T30876 punct (,red
R8660 T30876 T30870 parataxis red,stained
R8661 T30877 T30876 punct ),red
R8662 T30878 T30859 punct .,Testes
R8663 T30880 T30881 punct (,C
R8664 T30881 T30882 meta C,Testes
R8665 T30883 T30881 punct ),C
R8666 T30884 T30882 prep from,Testes
R8667 T30885 T30886 nummod 6,wk
R8668 T30886 T30888 npadvmod wk,old
R8669 T30887 T30886 punct -,wk
R8670 T30888 T30890 amod old,mice
R8671 T30889 T30888 punct -,old
R8672 T30890 T30884 pobj mice,from
R8673 T30891 T30882 acl sectioned,Testes
R8674 T30892 T30891 cc and,sectioned
R8675 T30893 T30891 conj stained,sectioned
R8676 T30894 T30893 prep with,stained
R8677 T30895 T30894 pobj antibody,with
R8678 T30896 T30895 prep to,antibody
R8679 T30897 T30896 pobj SUMO,to
R8680 T30898 T30897 punct -,SUMO
R8681 T30899 T30897 nummod 1,SUMO
R8682 T30900 T30901 punct (,green
R8683 T30901 T30893 parataxis green,stained
R8684 T30902 T30901 punct ),green
R8685 T30903 T30882 punct .,Testes
R8686 T30905 T30906 amod Abundant,cells
R8687 T30906 T30908 nsubj cells,are
R8688 T30907 T30906 compound pachytene,cells
R8689 T30909 T30906 prep with,cells
R8690 T30910 T30911 compound XY,bodies
R8691 T30911 T30909 pobj bodies,with
R8692 T30912 T30908 acomp present,are
R8693 T30913 T30908 prep in,are
R8694 T30914 T30915 amod wild,type
R8695 T30915 T30917 nmod type,testes
R8696 T30916 T30915 punct -,type
R8697 T30917 T30913 pobj testes,in
R8698 T30918 T30915 cc and,type
R8699 T30919 T30915 conj mutant,type
R8700 T30920 T30908 punct .,are

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T30755 0-7 GO:0001741 denotes XY Body
T30756 30-39 GO:0000239 denotes Pachynema
T30757 43-48 PR:000006549 denotes Dmrt7
T30758 56-60 NCBITaxon:10088 denotes Mice
T30759 65-75 UBERON:0000473 denotes Testicular
T30760 106-116 GO:0042571 denotes antibodies
T30761 136-141 PR:000015865 denotes SYCP3
T30762 154-163 GO:0000239 denotes pachytene
T30763 200-207 GO:0001741 denotes XY body
T30764 230-235 PR:000006549 denotes Dmrt7
T30765 248-254 UBERON:0000473 denotes Testes
T30766 269-273 NCBITaxon:10088 denotes mice
T30767 301-309 GO:0042571 denotes antibody
T30768 330-336 UBERON:0000473 denotes Testes
T30769 351-355 NCBITaxon:10088 denotes mice
T30770 383-391 GO:0042571 denotes antibody
T30771 395-401 PR:000015829 denotes SUMO-1
T30772 420-429 GO:0000239 denotes pachytene
T30773 441-450 GO:0001741 denotes XY bodies
T30774 487-493 UBERON:0000473 denotes testes

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T30775 0-7 GO:0001741 denotes XY Body
T30776 30-39 GO:0000239 denotes Pachynema
T30777 43-48 PR_EXT:000006549 denotes Dmrt7
T30778 49-55 SO_EXT:sequence_altered_entity_or_alteration_process denotes Mutant
T30779 56-60 NCBITaxon:10088 denotes Mice
T30780 65-75 UBERON:0000473 denotes Testicular
T30781 76-81 CL_GO_EXT:cell denotes cells
T30782 106-116 GO:0042571 denotes antibodies
T30783 136-141 PR_EXT:000015865 denotes SYCP3
T30784 154-163 GO:0000239 denotes pachytene
T30785 164-169 CL_GO_EXT:cell denotes cells
T30786 200-207 GO:0001741 denotes XY body
T30787 216-225 SO_EXT:wild_type_entity_or_quality denotes wild-type
T30788 230-235 PR_EXT:000006549 denotes Dmrt7
T30789 236-242 SO_EXT:sequence_altered_entity denotes mutant
T30790 248-254 UBERON:0000473 denotes Testes
T30791 269-273 NCBITaxon:10088 denotes mice
T30792 301-309 GO:0042571 denotes antibody
T30793 330-336 UBERON:0000473 denotes Testes
T30794 351-355 NCBITaxon:10088 denotes mice
T30795 383-391 GO:0042571 denotes antibody
T30796 395-401 PR_EXT:000015829 denotes SUMO-1
T30797 420-429 GO:0000239 denotes pachytene
T30798 430-435 CL_GO_EXT:cell denotes cells
T30799 441-450 GO:0001741 denotes XY bodies
T30800 466-475 SO_EXT:wild_type_entity_or_quality denotes wild-type
T30801 480-486 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T30802 487-493 UBERON:0000473 denotes testes