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PMC:1853120 / 29601-30105 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T30819 92-98 VBN denotes spread
T30820 99-102 CC denotes and
T30803 10-12 NN denotes XY
T30804 13-17 NN denotes Body
T30805 18-23 VBZ denotes Forms
T30806 24-32 RB denotes Normally
T30807 33-39 IN denotes during
T30808 40-49 NN denotes Pachynema
T30809 50-52 IN denotes in
T30810 53-58 NN denotes Dmrt7
T30811 59-65 NN denotes Mutant
T30812 66-70 NNS denotes Mice
T30813 70-160 sentence denotes (A) Testicular cells spread and stained with antibodies to γH2AX (red) and SYCP3 (green).
T30814 71-72 -LRB- denotes (
T30815 86-91 NNS denotes cells
T30816 72-73 LS denotes A
T30817 73-74 -RRB- denotes )
T30818 75-85 JJ denotes Testicular
T30821 103-110 VBN denotes stained
T30822 111-115 IN denotes with
T30823 116-126 NNS denotes antibodies
T30824 127-129 IN denotes to
T30825 130-135 NN denotes γH2AX
T30826 136-137 -LRB- denotes (
T30827 137-140 JJ denotes red
T30828 140-141 -RRB- denotes )
T30829 142-145 CC denotes and
T30830 146-151 NN denotes SYCP3
T30831 152-153 -LRB- denotes (
T30832 153-158 JJ denotes green
T30833 158-159 -RRB- denotes )
T30834 159-160 . denotes .
T30835 160-253 sentence denotes In pachytene cells, γH2AX is concentrated in the XY body both in wild-type and Dmrt7 mutant.
T30836 161-163 IN denotes In
T30837 190-202 VBN denotes concentrated
T30838 164-173 NN denotes pachytene
T30839 174-179 NNS denotes cells
T30840 179-181 , denotes ,
T30841 181-186 NN denotes γH2AX
T30842 187-189 VBZ denotes is
T30843 203-205 IN denotes in
T30844 206-209 DT denotes the
T30845 213-217 NN denotes body
T30846 210-212 NN denotes XY
T30847 218-222 CC denotes both
T30848 223-225 IN denotes in
T30849 226-230 JJ denotes wild
T30850 231-235 NN denotes type
T30851 230-231 HYPH denotes -
T30852 236-239 CC denotes and
T30853 240-245 NN denotes Dmrt7
T30854 246-252 NN denotes mutant
T30855 252-253 . denotes .
T30856 253-335 sentence denotes (B) Testes from 6-wk-old mice sectioned and stained with antibody to γH2AX (red).
T30857 254-255 -LRB- denotes (
T30858 255-256 LS denotes B
T30859 258-264 NNS denotes Testes
T30860 256-257 -RRB- denotes )
T30861 265-269 IN denotes from
T30862 270-271 CD denotes 6
T30863 272-274 NN denotes wk
T30864 271-272 HYPH denotes -
T30865 275-278 JJ denotes old
T30866 274-275 HYPH denotes -
T30867 279-283 NNS denotes mice
T30868 284-293 VBN denotes sectioned
T30869 294-297 CC denotes and
T30870 298-305 VBN denotes stained
T30871 306-310 IN denotes with
T30872 311-319 NN denotes antibody
T30873 320-322 IN denotes to
T30874 323-328 NN denotes γH2AX
T30875 329-330 -LRB- denotes (
T30876 330-333 JJ denotes red
T30877 333-334 -RRB- denotes )
T30878 334-335 . denotes .
T30879 335-420 sentence denotes (C) Testes from 6-wk-old mice sectioned and stained with antibody to SUMO-1 (green).
T30880 336-337 -LRB- denotes (
T30881 337-338 LS denotes C
T30882 340-346 NNS denotes Testes
T30883 338-339 -RRB- denotes )
T30884 347-351 IN denotes from
T30885 352-353 CD denotes 6
T30886 354-356 NN denotes wk
T30887 353-354 HYPH denotes -
T30888 357-360 JJ denotes old
T30889 356-357 HYPH denotes -
T30890 361-365 NNS denotes mice
T30891 366-375 VBN denotes sectioned
T30892 376-379 CC denotes and
T30893 380-387 VBN denotes stained
T30894 388-392 IN denotes with
T30895 393-401 NN denotes antibody
T30896 402-404 IN denotes to
T30897 405-409 NN denotes SUMO
T30898 409-410 HYPH denotes -
T30899 410-411 CD denotes 1
T30900 412-413 -LRB- denotes (
T30901 413-418 JJ denotes green
T30902 418-419 -RRB- denotes )
T30903 419-420 . denotes .
T30904 420-504 sentence denotes Abundant pachytene cells with XY bodies are present in wild-type and mutant testes.
T30905 421-429 JJ denotes Abundant
T30906 440-445 NNS denotes cells
T30907 430-439 NN denotes pachytene
T30908 461-464 VBP denotes are
T30909 446-450 IN denotes with
T30910 451-453 NN denotes XY
T30911 454-460 NNS denotes bodies
T30912 465-472 JJ denotes present
T30913 473-475 IN denotes in
T30914 476-480 JJ denotes wild
T30915 481-485 NN denotes type
T30916 480-481 HYPH denotes -
T30917 497-503 NNS denotes testes
T30918 486-489 CC denotes and
T30919 490-496 NN denotes mutant
T30920 503-504 . denotes .
R8594 T30803 T30804 compound XY,Body
R8595 T30804 T30805 nsubj Body,Forms
R8596 T30806 T30805 advmod Normally,Forms
R8597 T30807 T30805 prep during,Forms
R8598 T30808 T30807 pobj Pachynema,during
R8599 T30809 T30805 prep in,Forms
R8600 T30810 T30811 compound Dmrt7,Mutant
R8601 T30811 T30812 compound Mutant,Mice
R8602 T30812 T30809 pobj Mice,in
R8603 T30814 T30815 punct (,cells
R8604 T30816 T30815 meta A,cells
R8605 T30817 T30815 punct ),cells
R8606 T30818 T30815 amod Testicular,cells
R8607 T30819 T30815 acl spread,cells
R8608 T30820 T30819 cc and,spread
R8609 T30821 T30819 conj stained,spread
R8610 T30822 T30821 prep with,stained
R8611 T30823 T30822 pobj antibodies,with
R8612 T30824 T30823 prep to,antibodies
R8613 T30825 T30824 pobj γH2AX,to
R8614 T30826 T30827 punct (,red
R8615 T30827 T30825 parataxis red,γH2AX
R8616 T30828 T30827 punct ),red
R8617 T30829 T30825 cc and,γH2AX
R8618 T30830 T30825 conj SYCP3,γH2AX
R8619 T30831 T30832 punct (,green
R8620 T30832 T30830 parataxis green,SYCP3
R8621 T30833 T30832 punct ),green
R8622 T30834 T30815 punct .,cells
R8623 T30836 T30837 prep In,concentrated
R8624 T30838 T30839 compound pachytene,cells
R8625 T30839 T30836 pobj cells,In
R8626 T30840 T30837 punct ", ",concentrated
R8627 T30841 T30837 nsubjpass γH2AX,concentrated
R8628 T30842 T30837 auxpass is,concentrated
R8629 T30843 T30837 prep in,concentrated
R8630 T30844 T30845 det the,body
R8631 T30845 T30843 pobj body,in
R8632 T30846 T30845 compound XY,body
R8633 T30847 T30848 preconj both,in
R8634 T30848 T30837 prep in,concentrated
R8635 T30849 T30850 amod wild,type
R8636 T30850 T30848 pobj type,in
R8637 T30851 T30850 punct -,type
R8638 T30852 T30850 cc and,type
R8639 T30853 T30854 compound Dmrt7,mutant
R8640 T30854 T30850 conj mutant,type
R8641 T30855 T30837 punct .,concentrated
R8642 T30857 T30858 punct (,B
R8643 T30858 T30859 meta B,Testes
R8644 T30860 T30858 punct ),B
R8645 T30861 T30859 prep from,Testes
R8646 T30862 T30863 nummod 6,wk
R8647 T30863 T30865 npadvmod wk,old
R8648 T30864 T30863 punct -,wk
R8649 T30865 T30867 amod old,mice
R8650 T30866 T30865 punct -,old
R8651 T30867 T30861 pobj mice,from
R8652 T30868 T30859 acl sectioned,Testes
R8653 T30869 T30868 cc and,sectioned
R8654 T30870 T30868 conj stained,sectioned
R8655 T30871 T30870 prep with,stained
R8656 T30872 T30871 pobj antibody,with
R8657 T30873 T30872 prep to,antibody
R8658 T30874 T30873 pobj γH2AX,to
R8659 T30875 T30876 punct (,red
R8660 T30876 T30870 parataxis red,stained
R8661 T30877 T30876 punct ),red
R8662 T30878 T30859 punct .,Testes
R8663 T30880 T30881 punct (,C
R8664 T30881 T30882 meta C,Testes
R8665 T30883 T30881 punct ),C
R8666 T30884 T30882 prep from,Testes
R8667 T30885 T30886 nummod 6,wk
R8668 T30886 T30888 npadvmod wk,old
R8669 T30887 T30886 punct -,wk
R8670 T30888 T30890 amod old,mice
R8671 T30889 T30888 punct -,old
R8672 T30890 T30884 pobj mice,from
R8673 T30891 T30882 acl sectioned,Testes
R8674 T30892 T30891 cc and,sectioned
R8675 T30893 T30891 conj stained,sectioned
R8676 T30894 T30893 prep with,stained
R8677 T30895 T30894 pobj antibody,with
R8678 T30896 T30895 prep to,antibody
R8679 T30897 T30896 pobj SUMO,to
R8680 T30898 T30897 punct -,SUMO
R8681 T30899 T30897 nummod 1,SUMO
R8682 T30900 T30901 punct (,green
R8683 T30901 T30893 parataxis green,stained
R8684 T30902 T30901 punct ),green
R8685 T30903 T30882 punct .,Testes
R8686 T30905 T30906 amod Abundant,cells
R8687 T30906 T30908 nsubj cells,are
R8688 T30907 T30906 compound pachytene,cells
R8689 T30909 T30906 prep with,cells
R8690 T30910 T30911 compound XY,bodies
R8691 T30911 T30909 pobj bodies,with
R8692 T30912 T30908 acomp present,are
R8693 T30913 T30908 prep in,are
R8694 T30914 T30915 amod wild,type
R8695 T30915 T30917 nmod type,testes
R8696 T30916 T30915 punct -,type
R8697 T30917 T30913 pobj testes,in
R8698 T30918 T30915 cc and,type
R8699 T30919 T30915 conj mutant,type
R8700 T30920 T30908 punct .,are

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T30755 10-17 GO:0001741 denotes XY Body
T30756 40-49 GO:0000239 denotes Pachynema
T30757 53-58 PR:000006549 denotes Dmrt7
T30758 66-70 NCBITaxon:10088 denotes Mice
T30759 75-85 UBERON:0000473 denotes Testicular
T30760 116-126 GO:0042571 denotes antibodies
T30761 146-151 PR:000015865 denotes SYCP3
T30762 164-173 GO:0000239 denotes pachytene
T30763 210-217 GO:0001741 denotes XY body
T30764 240-245 PR:000006549 denotes Dmrt7
T30765 258-264 UBERON:0000473 denotes Testes
T30766 279-283 NCBITaxon:10088 denotes mice
T30767 311-319 GO:0042571 denotes antibody
T30768 340-346 UBERON:0000473 denotes Testes
T30769 361-365 NCBITaxon:10088 denotes mice
T30770 393-401 GO:0042571 denotes antibody
T30771 405-411 PR:000015829 denotes SUMO-1
T30772 430-439 GO:0000239 denotes pachytene
T30773 451-460 GO:0001741 denotes XY bodies
T30774 497-503 UBERON:0000473 denotes testes

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T30775 10-17 GO:0001741 denotes XY Body
T30776 40-49 GO:0000239 denotes Pachynema
T30777 53-58 PR_EXT:000006549 denotes Dmrt7
T30778 59-65 SO_EXT:sequence_altered_entity_or_alteration_process denotes Mutant
T30779 66-70 NCBITaxon:10088 denotes Mice
T30780 75-85 UBERON:0000473 denotes Testicular
T30781 86-91 CL_GO_EXT:cell denotes cells
T30782 116-126 GO:0042571 denotes antibodies
T30783 146-151 PR_EXT:000015865 denotes SYCP3
T30784 164-173 GO:0000239 denotes pachytene
T30785 174-179 CL_GO_EXT:cell denotes cells
T30786 210-217 GO:0001741 denotes XY body
T30787 226-235 SO_EXT:wild_type_entity_or_quality denotes wild-type
T30788 240-245 PR_EXT:000006549 denotes Dmrt7
T30789 246-252 SO_EXT:sequence_altered_entity denotes mutant
T30790 258-264 UBERON:0000473 denotes Testes
T30791 279-283 NCBITaxon:10088 denotes mice
T30792 311-319 GO:0042571 denotes antibody
T30793 340-346 UBERON:0000473 denotes Testes
T30794 361-365 NCBITaxon:10088 denotes mice
T30795 393-401 GO:0042571 denotes antibody
T30796 405-411 PR_EXT:000015829 denotes SUMO-1
T30797 430-439 GO:0000239 denotes pachytene
T30798 440-445 CL_GO_EXT:cell denotes cells
T30799 451-460 GO:0001741 denotes XY bodies
T30800 476-485 SO_EXT:wild_type_entity_or_quality denotes wild-type
T30801 490-496 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T30802 497-503 UBERON:0000473 denotes testes