Program/Option  k2  k3  k5  k7  k10  k15
CLUSTALW (default)  8  7  8  8  7  7
CLUSTALW (optimized)  6  6  7  7  6  6
MAFFT (FFT-NS-2)  2  4  4  4  5  5
MAFFT (G-INS-i)  1  1  1  1  1  1
MUSCLE  3  3  3  2  2  2
PCMA  9  10  10  10  10  10
POA  7  8  9  9  9  9
PROALIGN  5  5  6  6  8  8
PROBCONSRNA  4  2  2  3  3  4
PRRN  10  9  5  5  4  3