PMC:1540739 / 14535-15765
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11759 | 0-2 | PRP | denotes | We |
T11760 | 8-14 | VBD | denotes | tested |
T11761 | 3-7 | RB | denotes | next |
T11762 | 15-18 | DT | denotes | the |
T11763 | 19-29 | NN | denotes | efficiency |
T11764 | 30-32 | IN | denotes | of |
T11765 | 33-37 | NN | denotes | RMCE |
T11766 | 38-40 | IN | denotes | in |
T11767 | 41-43 | NN | denotes | ES |
T11768 | 44-49 | NNS | denotes | cells |
T11769 | 49-51 | , | denotes | , |
T11770 | 51-56 | VBG | denotes | using |
T11771 | 57-58 | DT | denotes | a |
T11772 | 71-80 | NN | denotes | construct |
T11773 | 59-70 | NN | denotes | replacement |
T11774 | 81-89 | VBG | denotes | encoding |
T11775 | 90-93 | NN | denotes | p53 |
T11776 | 94-99 | VBN | denotes | fused |
T11777 | 100-102 | IN | denotes | to |
T11778 | 103-106 | NN | denotes | GFP |
T11779 | 107-108 | -LRB- | denotes | ( |
T11780 | 108-114 | NN | denotes | p53GFP |
T11781 | 114-115 | -RRB- | denotes | ) |
T11782 | 116-118 | TO | denotes | to |
T11783 | 119-125 | VB | denotes | enable |
T11784 | 126-134 | VBG | denotes | tracking |
T11785 | 135-138 | NN | denotes | p53 |
T11786 | 139-141 | IN | denotes | in |
T11787 | 142-152 | JJ | denotes | individual |
T11788 | 158-163 | NNS | denotes | cells |
T11789 | 153-157 | JJ | denotes | live |
T11790 | 163-164 | . | denotes | . |
T11791 | 164-331 | sentence | denotes | Importantly however, GFP fluorescence was not used to screen cells with targeted events, as we wanted to develop a general method to isolate marker-free recombinants. |
T11792 | 165-176 | RB | denotes | Importantly |
T11793 | 211-215 | VBN | denotes | used |
T11794 | 177-184 | RB | denotes | however |
T11795 | 184-186 | , | denotes | , |
T11796 | 186-189 | NN | denotes | GFP |
T11797 | 190-202 | NN | denotes | fluorescence |
T11798 | 203-206 | VBD | denotes | was |
T11799 | 207-210 | RB | denotes | not |
T11800 | 216-218 | TO | denotes | to |
T11801 | 219-225 | VB | denotes | screen |
T11802 | 226-231 | NNS | denotes | cells |
T11803 | 232-236 | IN | denotes | with |
T11804 | 237-245 | VBN | denotes | targeted |
T11805 | 246-252 | NNS | denotes | events |
T11806 | 252-254 | , | denotes | , |
T11807 | 254-256 | IN | denotes | as |
T11808 | 260-266 | VBD | denotes | wanted |
T11809 | 257-259 | PRP | denotes | we |
T11810 | 267-269 | TO | denotes | to |
T11811 | 270-277 | VB | denotes | develop |
T11812 | 278-279 | DT | denotes | a |
T11813 | 288-294 | NN | denotes | method |
T11814 | 280-287 | JJ | denotes | general |
T11815 | 295-297 | TO | denotes | to |
T11816 | 298-305 | VB | denotes | isolate |
T11817 | 306-312 | NN | denotes | marker |
T11818 | 313-317 | JJ | denotes | free |
T11819 | 312-313 | HYPH | denotes | - |
T11820 | 318-330 | NNS | denotes | recombinants |
T11821 | 330-331 | . | denotes | . |
T11822 | 331-379 | sentence | denotes | The exchange strategy is detailed in Figure 3A. |
T11823 | 332-335 | DT | denotes | The |
T11824 | 345-353 | NN | denotes | strategy |
T11825 | 336-344 | NN | denotes | exchange |
T11826 | 357-365 | VBN | denotes | detailed |
T11827 | 354-356 | VBZ | denotes | is |
T11828 | 366-368 | IN | denotes | in |
T11829 | 369-375 | NN | denotes | Figure |
T11830 | 376-378 | NN | denotes | 3A |
T11831 | 378-379 | . | denotes | . |
T11832 | 379-550 | sentence | denotes | We picked 65 ES cell clones resistant to 1-(-2-deoxy-2-fluoro-1-b-d-arabino-furanosyl)-5-iodouracil (FIAU) due to TK loss and analyzed their DNA by PCR and Southern blot. |
T11833 | 380-382 | PRP | denotes | We |
T11834 | 383-389 | VBD | denotes | picked |
T11835 | 390-392 | CD | denotes | 65 |
T11836 | 401-407 | NNS | denotes | clones |
T11837 | 393-395 | NN | denotes | ES |
T11838 | 396-400 | NN | denotes | cell |
T11839 | 408-417 | JJ | denotes | resistant |
T11840 | 418-420 | IN | denotes | to |
T11841 | 421-422 | CD | denotes | 1 |
T11842 | 467-468 | CD | denotes | 5 |
T11843 | 422-423 | HYPH | denotes | - |
T11844 | 423-424 | -LRB- | denotes | ( |
T11845 | 456-465 | NN | denotes | furanosyl |
T11846 | 424-425 | HYPH | denotes | - |
T11847 | 425-426 | CD | denotes | 2 |
T11848 | 426-427 | HYPH | denotes | - |
T11849 | 427-432 | NN | denotes | deoxy |
T11850 | 432-433 | HYPH | denotes | - |
T11851 | 433-434 | CD | denotes | 2 |
T11852 | 434-435 | HYPH | denotes | - |
T11853 | 435-441 | NN | denotes | fluoro |
T11854 | 441-442 | HYPH | denotes | - |
T11855 | 442-443 | CD | denotes | 1 |
T11856 | 443-444 | HYPH | denotes | - |
T11857 | 444-445 | NN | denotes | b |
T11858 | 445-446 | HYPH | denotes | - |
T11859 | 446-447 | NN | denotes | d |
T11860 | 447-448 | HYPH | denotes | - |
T11861 | 448-455 | NN | denotes | arabino |
T11862 | 455-456 | HYPH | denotes | - |
T11863 | 465-466 | -RRB- | denotes | ) |
T11864 | 466-467 | HYPH | denotes | - |
T11865 | 469-479 | NN | denotes | iodouracil |
T11866 | 468-469 | HYPH | denotes | - |
T11867 | 480-481 | -LRB- | denotes | ( |
T11868 | 481-485 | NN | denotes | FIAU |
T11869 | 485-486 | -RRB- | denotes | ) |
T11870 | 487-490 | IN | denotes | due |
T11871 | 491-493 | IN | denotes | to |
T11872 | 494-496 | NN | denotes | TK |
T11873 | 497-501 | NN | denotes | loss |
T11874 | 502-505 | CC | denotes | and |
T11875 | 506-514 | VBD | denotes | analyzed |
T11876 | 515-520 | PRP$ | denotes | their |
T11877 | 521-524 | NN | denotes | DNA |
T11878 | 525-527 | IN | denotes | by |
T11879 | 528-531 | NN | denotes | PCR |
T11880 | 532-535 | CC | denotes | and |
T11881 | 536-544 | NNP | denotes | Southern |
T11882 | 545-549 | NN | denotes | blot |
T11883 | 549-550 | . | denotes | . |
T11884 | 550-646 | sentence | denotes | Strikingly, 54 proper recombinants were identified, indicating very high RMCE efficiency (83%). |
T11885 | 551-561 | RB | denotes | Strikingly |
T11886 | 591-601 | VBN | denotes | identified |
T11887 | 561-563 | , | denotes | , |
T11888 | 563-565 | CD | denotes | 54 |
T11889 | 573-585 | NNS | denotes | recombinants |
T11890 | 566-572 | JJ | denotes | proper |
T11891 | 586-590 | VBD | denotes | were |
T11892 | 601-603 | , | denotes | , |
T11893 | 603-613 | VBG | denotes | indicating |
T11894 | 614-618 | RB | denotes | very |
T11895 | 619-623 | JJ | denotes | high |
T11896 | 629-639 | NN | denotes | efficiency |
T11897 | 624-628 | NN | denotes | RMCE |
T11898 | 640-641 | -LRB- | denotes | ( |
T11899 | 643-644 | NN | denotes | % |
T11900 | 641-643 | CD | denotes | 83 |
T11901 | 644-645 | -RRB- | denotes | ) |
T11902 | 645-646 | . | denotes | . |
T11903 | 646-752 | sentence | denotes | RMCE also proved to be precise, as no aberrant bands were detected in PCR and Southern blots (Figure 3A). |
T11904 | 647-651 | NN | denotes | RMCE |
T11905 | 657-663 | VBD | denotes | proved |
T11906 | 652-656 | RB | denotes | also |
T11907 | 664-666 | TO | denotes | to |
T11908 | 667-669 | VB | denotes | be |
T11909 | 670-677 | JJ | denotes | precise |
T11910 | 677-679 | , | denotes | , |
T11911 | 679-681 | IN | denotes | as |
T11912 | 705-713 | VBN | denotes | detected |
T11913 | 682-684 | DT | denotes | no |
T11914 | 694-699 | NNS | denotes | bands |
T11915 | 685-693 | JJ | denotes | aberrant |
T11916 | 700-704 | VBD | denotes | were |
T11917 | 714-716 | IN | denotes | in |
T11918 | 717-720 | NN | denotes | PCR |
T11919 | 721-724 | CC | denotes | and |
T11920 | 725-733 | NNP | denotes | Southern |
T11921 | 734-739 | NNS | denotes | blots |
T11922 | 740-741 | -LRB- | denotes | ( |
T11923 | 748-750 | NN | denotes | 3A |
T11924 | 741-747 | NN | denotes | Figure |
T11925 | 750-751 | -RRB- | denotes | ) |
T11926 | 751-752 | . | denotes | . |
T11927 | 752-906 | sentence | denotes | p53+/GFP ES clones were analyzed by western blot with an antibody against p53, and found to express an additional band at the expected size (ca. 80 kDa). |
T11928 | 753-756 | NN | denotes | p53 |
T11929 | 758-761 | NN | denotes | GFP |
T11930 | 756-757 | SYM | denotes | + |
T11931 | 757-758 | HYPH | denotes | / |
T11932 | 765-771 | NNS | denotes | clones |
T11933 | 762-764 | NN | denotes | ES |
T11934 | 777-785 | VBN | denotes | analyzed |
T11935 | 772-776 | VBD | denotes | were |
T11936 | 786-788 | IN | denotes | by |
T11937 | 789-796 | NNP | denotes | western |
T11938 | 797-801 | NN | denotes | blot |
T11939 | 802-806 | IN | denotes | with |
T11940 | 807-809 | DT | denotes | an |
T11941 | 810-818 | NN | denotes | antibody |
T11942 | 819-826 | IN | denotes | against |
T11943 | 827-830 | NN | denotes | p53 |
T11944 | 830-832 | , | denotes | , |
T11945 | 832-835 | CC | denotes | and |
T11946 | 836-841 | VBN | denotes | found |
T11947 | 842-844 | TO | denotes | to |
T11948 | 845-852 | VB | denotes | express |
T11949 | 853-855 | DT | denotes | an |
T11950 | 867-871 | NN | denotes | band |
T11951 | 856-866 | JJ | denotes | additional |
T11952 | 872-874 | IN | denotes | at |
T11953 | 875-878 | DT | denotes | the |
T11954 | 888-892 | NN | denotes | size |
T11955 | 879-887 | VBN | denotes | expected |
T11956 | 893-894 | -LRB- | denotes | ( |
T11957 | 894-897 | NN | denotes | ca. |
T11958 | 898-900 | CD | denotes | 80 |
T11959 | 901-904 | NN | denotes | kDa |
T11960 | 904-905 | -RRB- | denotes | ) |
T11961 | 905-906 | . | denotes | . |
T11962 | 906-1230 | sentence | denotes | Surprisingly, the fusion of GFP to p53 apparently altered p53 stability: steady-state levels of p53GFP were much higher than those of wild-type p53 (p53WT) in unstressed cells, and did not vary significantly after DNA damage, so that the levels for both p53WT and p53GFP were similar after adriamycin treatment (Figure 3A). |
T11963 | 907-919 | RB | denotes | Surprisingly |
T11964 | 957-964 | VBD | denotes | altered |
T11965 | 919-921 | , | denotes | , |
T11966 | 921-924 | DT | denotes | the |
T11967 | 925-931 | NN | denotes | fusion |
T11968 | 932-934 | IN | denotes | of |
T11969 | 935-938 | NN | denotes | GFP |
T11970 | 939-941 | IN | denotes | to |
T11971 | 942-945 | NN | denotes | p53 |
T11972 | 946-956 | RB | denotes | apparently |
T11973 | 1010-1014 | VBD | denotes | were |
T11974 | 965-968 | NN | denotes | p53 |
T11975 | 969-978 | NN | denotes | stability |
T11976 | 978-980 | : | denotes | : |
T11977 | 980-986 | JJ | denotes | steady |
T11978 | 987-992 | NN | denotes | state |
T11979 | 986-987 | HYPH | denotes | - |
T11980 | 993-999 | NNS | denotes | levels |
T11981 | 1000-1002 | IN | denotes | of |
T11982 | 1003-1009 | NN | denotes | p53GFP |
T11983 | 1015-1019 | RB | denotes | much |
T11984 | 1020-1026 | JJR | denotes | higher |
T11985 | 1027-1031 | IN | denotes | than |
T11986 | 1032-1037 | DT | denotes | those |
T11987 | 1038-1040 | IN | denotes | of |
T11988 | 1041-1045 | JJ | denotes | wild |
T11989 | 1046-1050 | NN | denotes | type |
T11990 | 1045-1046 | HYPH | denotes | - |
T11991 | 1051-1054 | NN | denotes | p53 |
T11992 | 1055-1056 | -LRB- | denotes | ( |
T11993 | 1056-1061 | NN | denotes | p53WT |
T11994 | 1061-1062 | -RRB- | denotes | ) |
T11995 | 1063-1065 | IN | denotes | in |
T11996 | 1066-1076 | JJ | denotes | unstressed |
T11997 | 1077-1082 | NNS | denotes | cells |
T11998 | 1082-1084 | , | denotes | , |
T11999 | 1084-1087 | CC | denotes | and |
T12000 | 1088-1091 | VBD | denotes | did |
T12001 | 1096-1100 | VB | denotes | vary |
T12002 | 1092-1095 | RB | denotes | not |
T12003 | 1101-1114 | RB | denotes | significantly |
T12004 | 1115-1120 | IN | denotes | after |
T12005 | 1121-1124 | NN | denotes | DNA |
T12006 | 1125-1131 | NN | denotes | damage |
T12007 | 1131-1133 | , | denotes | , |
T12008 | 1133-1135 | IN | denotes | so |
T12009 | 1178-1182 | VBD | denotes | were |
T12010 | 1136-1140 | IN | denotes | that |
T12011 | 1141-1144 | DT | denotes | the |
T12012 | 1145-1151 | NNS | denotes | levels |
T12013 | 1152-1155 | IN | denotes | for |
T12014 | 1156-1160 | CC | denotes | both |
T12015 | 1161-1166 | NN | denotes | p53WT |
T12016 | 1167-1170 | CC | denotes | and |
T12017 | 1171-1177 | NN | denotes | p53GFP |
T12018 | 1183-1190 | JJ | denotes | similar |
T12019 | 1191-1196 | IN | denotes | after |
T12020 | 1197-1207 | NN | denotes | adriamycin |
T12021 | 1208-1217 | NN | denotes | treatment |
T12022 | 1218-1219 | -LRB- | denotes | ( |
T12023 | 1226-1228 | NN | denotes | 3A |
T12024 | 1219-1225 | NN | denotes | Figure |
T12025 | 1228-1229 | -RRB- | denotes | ) |
T12026 | 1229-1230 | . | denotes | . |
R2736 | T11850 | T11845 | punct | -,furanosyl |
R2737 | T11851 | T11845 | nummod | 2,furanosyl |
R2738 | T11852 | T11845 | punct | -,furanosyl |
R2739 | T11853 | T11845 | nmod | fluoro,furanosyl |
R2740 | T11854 | T11845 | punct | -,furanosyl |
R2741 | T11855 | T11845 | nummod | 1,furanosyl |
R2742 | T11856 | T11845 | punct | -,furanosyl |
R2743 | T11857 | T11845 | compound | b,furanosyl |
R2744 | T11858 | T11845 | punct | -,furanosyl |
R2745 | T11859 | T11845 | compound | d,furanosyl |
R2746 | T11860 | T11845 | punct | -,furanosyl |
R2747 | T11861 | T11845 | compound | arabino,furanosyl |
R2748 | T11862 | T11845 | punct | -,furanosyl |
R2749 | T11863 | T11845 | punct | ),furanosyl |
R2750 | T11864 | T11842 | punct | -,5 |
R2752 | T11865 | T11840 | pobj | iodouracil,to |
R2756 | T11866 | T11865 | punct | -,iodouracil |
R2760 | T11867 | T11865 | punct | (,iodouracil |
R2764 | T11868 | T11865 | appos | FIAU,iodouracil |
R2768 | T11869 | T11839 | punct | ),resistant |
R2770 | T11759 | T11760 | nsubj | We,tested |
R2771 | T11761 | T11760 | advmod | next,tested |
R2772 | T11762 | T11763 | det | the,efficiency |
R2773 | T11870 | T11839 | prep | due,resistant |
R2774 | T11763 | T11760 | dobj | efficiency,tested |
R2775 | T11764 | T11763 | prep | of,efficiency |
R2776 | T11765 | T11764 | pobj | RMCE,of |
R2777 | T11871 | T11870 | pcomp | to,due |
R2778 | T11766 | T11763 | prep | in,efficiency |
R2779 | T11767 | T11768 | compound | ES,cells |
R2780 | T11768 | T11766 | pobj | cells,in |
R2781 | T11872 | T11873 | compound | TK,loss |
R2782 | T11769 | T11760 | punct | ", ",tested |
R2783 | T11873 | T11870 | pobj | loss,due |
R2784 | T11874 | T11834 | cc | and,picked |
R2785 | T11770 | T11760 | advcl | using,tested |
R2786 | T11771 | T11772 | det | a,construct |
R2787 | T11772 | T11770 | dobj | construct,using |
R2788 | T11875 | T11834 | conj | analyzed,picked |
R2789 | T11773 | T11772 | compound | replacement,construct |
R2790 | T11774 | T11772 | acl | encoding,construct |
R2791 | T11876 | T11877 | poss | their,DNA |
R2792 | T11775 | T11774 | dobj | p53,encoding |
R2793 | T11877 | T11875 | dobj | DNA,analyzed |
R2794 | T11776 | T11772 | acl | fused,construct |
R2795 | T11777 | T11776 | prep | to,fused |
R2796 | T11778 | T11777 | pobj | GFP,to |
R2797 | T11878 | T11875 | prep | by,analyzed |
R2798 | T11779 | T11778 | punct | (,GFP |
R2799 | T11780 | T11778 | appos | p53GFP,GFP |
R2800 | T11781 | T11770 | punct | ),using |
R2801 | T11879 | T11878 | pobj | PCR,by |
R2802 | T11782 | T11783 | aux | to,enable |
R2803 | T11783 | T11770 | advcl | enable,using |
R2804 | T11784 | T11785 | amod | tracking,p53 |
R2805 | T11880 | T11879 | cc | and,PCR |
R2806 | T11785 | T11783 | dobj | p53,enable |
R2807 | T11786 | T11783 | prep | in,enable |
R2808 | T11787 | T11788 | amod | individual,cells |
R2809 | T11881 | T11882 | compound | Southern,blot |
R2810 | T11788 | T11786 | pobj | cells,in |
R2811 | T11789 | T11788 | amod | live,cells |
R2812 | T11790 | T11760 | punct | .,tested |
R2813 | T11882 | T11879 | conj | blot,PCR |
R2814 | T11792 | T11793 | advmod | Importantly,used |
R2815 | T11883 | T11834 | punct | .,picked |
R2816 | T11794 | T11793 | advmod | however,used |
R2817 | T11795 | T11793 | punct | ", ",used |
R2818 | T11796 | T11797 | compound | GFP,fluorescence |
R2819 | T11885 | T11886 | advmod | Strikingly,identified |
R2820 | T11797 | T11793 | nsubjpass | fluorescence,used |
R2821 | T11798 | T11793 | auxpass | was,used |
R2822 | T11799 | T11793 | neg | not,used |
R2823 | T11800 | T11801 | aux | to,screen |
R2824 | T11801 | T11793 | advcl | screen,used |
R2825 | T11802 | T11801 | dobj | cells,screen |
R2826 | T11803 | T11802 | prep | with,cells |
R2827 | T11887 | T11886 | punct | ", ",identified |
R2828 | T11804 | T11805 | amod | targeted,events |
R2829 | T11805 | T11803 | pobj | events,with |
R2830 | T11806 | T11793 | punct | ", ",used |
R2831 | T11807 | T11808 | mark | as,wanted |
R2832 | T11888 | T11889 | nummod | 54,recombinants |
R2833 | T11808 | T11793 | advcl | wanted,used |
R2834 | T11809 | T11808 | nsubj | we,wanted |
R2835 | T11810 | T11811 | aux | to,develop |
R2836 | T11811 | T11808 | xcomp | develop,wanted |
R2837 | T11889 | T11886 | nsubjpass | recombinants,identified |
R2838 | T11812 | T11813 | det | a,method |
R2839 | T11813 | T11811 | dobj | method,develop |
R2840 | T11814 | T11813 | amod | general,method |
R2841 | T11890 | T11889 | amod | proper,recombinants |
R2842 | T11815 | T11816 | aux | to,isolate |
R2843 | T11816 | T11811 | advcl | isolate,develop |
R2844 | T11891 | T11886 | auxpass | were,identified |
R2845 | T11817 | T11818 | npadvmod | marker,free |
R2846 | T11818 | T11820 | amod | free,recombinants |
R2847 | T11819 | T11818 | punct | -,free |
R2848 | T11892 | T11886 | punct | ", ",identified |
R2849 | T11820 | T11816 | dobj | recombinants,isolate |
R2850 | T11821 | T11793 | punct | .,used |
R2851 | T11893 | T11886 | advcl | indicating,identified |
R2852 | T11823 | T11824 | det | The,strategy |
R2853 | T11824 | T11826 | nsubjpass | strategy,detailed |
R2854 | T11825 | T11824 | compound | exchange,strategy |
R2855 | T11894 | T11895 | advmod | very,high |
R2856 | T11827 | T11826 | auxpass | is,detailed |
R2857 | T11895 | T11896 | amod | high,efficiency |
R2858 | T11828 | T11826 | prep | in,detailed |
R2859 | T11829 | T11830 | compound | Figure,3A |
R2860 | T11830 | T11828 | pobj | 3A,in |
R2861 | T11896 | T11893 | dobj | efficiency,indicating |
R2862 | T11831 | T11826 | punct | .,detailed |
R2863 | T11833 | T11834 | nsubj | We,picked |
R2865 | T11835 | T11836 | nummod | 65,clones |
R2866 | T11836 | T11834 | dobj | clones,picked |
R2867 | T11898 | T11899 | punct | (,% |
R2868 | T11837 | T11838 | compound | ES,cell |
R2869 | T11838 | T11836 | compound | cell,clones |
R2870 | T11839 | T11836 | relcl | resistant,clones |
R2871 | T11899 | T11896 | parataxis | %,efficiency |
R2872 | T11840 | T11839 | prep | to,resistant |
R2873 | T11841 | T11842 | nummod | 1,5 |
R2874 | T11900 | T11899 | nummod | 83,% |
R2875 | T11842 | T11865 | nummod | 5,iodouracil |
R2876 | T11843 | T11842 | punct | -,5 |
R2877 | T11901 | T11899 | punct | ),% |
R2878 | T11844 | T11845 | punct | (,furanosyl |
R2879 | T11845 | T11842 | parataxis | furanosyl,5 |
R2880 | T11846 | T11845 | punct | -,furanosyl |
R2881 | T11902 | T11886 | punct | .,identified |
R2882 | T11847 | T11845 | nummod | 2,furanosyl |
R2883 | T11848 | T11845 | punct | -,furanosyl |
R2884 | T11849 | T11845 | nmod | deoxy,furanosyl |
R2885 | T11904 | T11905 | nsubj | RMCE,proved |
R2886 | T11906 | T11905 | advmod | also,proved |
R2887 | T11907 | T11908 | aux | to,be |
R2888 | T11908 | T11905 | xcomp | be,proved |
R2889 | T11909 | T11908 | acomp | precise,be |
R2890 | T11910 | T11908 | punct | ", ",be |
R2891 | T11955 | T11954 | amod | expected,size |
R2892 | T11956 | T11954 | punct | (,size |
R2893 | T11911 | T11912 | mark | as,detected |
R2894 | T11957 | T11958 | quantmod | ca.,80 |
R2895 | T11958 | T11959 | nummod | 80,kDa |
R2896 | T11912 | T11908 | advcl | detected,be |
R2897 | T11959 | T11954 | appos | kDa,size |
R2898 | T11960 | T11934 | punct | ),analyzed |
R2899 | T11961 | T11934 | punct | .,analyzed |
R2900 | T11913 | T11914 | det | no,bands |
R2901 | T11963 | T11964 | advmod | Surprisingly,altered |
R2902 | T11914 | T11912 | nsubjpass | bands,detected |
R2903 | T11964 | T11973 | ccomp | altered,were |
R2904 | T11965 | T11964 | punct | ", ",altered |
R2905 | T11966 | T11967 | det | the,fusion |
R2906 | T11915 | T11914 | amod | aberrant,bands |
R2907 | T11967 | T11964 | nsubj | fusion,altered |
R2908 | T11968 | T11967 | prep | of,fusion |
R2909 | T11916 | T11912 | auxpass | were,detected |
R2910 | T11969 | T11968 | pobj | GFP,of |
R2911 | T11970 | T11967 | prep | to,fusion |
R2912 | T11971 | T11970 | pobj | p53,to |
R2913 | T11917 | T11912 | prep | in,detected |
R2914 | T11972 | T11964 | advmod | apparently,altered |
R2915 | T11974 | T11975 | compound | p53,stability |
R2916 | T11918 | T11917 | pobj | PCR,in |
R2917 | T11975 | T11964 | dobj | stability,altered |
R2918 | T11976 | T11973 | punct | : ,were |
R2919 | T11977 | T11978 | amod | steady,state |
R2920 | T11919 | T11918 | cc | and,PCR |
R2921 | T11978 | T11980 | compound | state,levels |
R2922 | T11979 | T11978 | punct | -,state |
R2923 | T11980 | T11973 | nsubj | levels,were |
R2924 | T11920 | T11921 | compound | Southern,blots |
R2925 | T11981 | T11980 | prep | of,levels |
R2926 | T11982 | T11981 | pobj | p53GFP,of |
R2927 | T11983 | T11984 | advmod | much,higher |
R2928 | T11984 | T11973 | acomp | higher,were |
R2929 | T11985 | T11984 | prep | than,higher |
R2930 | T11986 | T11985 | pobj | those,than |
R2931 | T11987 | T11986 | prep | of,those |
R2932 | T11921 | T11918 | conj | blots,PCR |
R2933 | T11988 | T11989 | amod | wild,type |
R2934 | T11989 | T11991 | compound | type,p53 |
R2935 | T11990 | T11989 | punct | -,type |
R2936 | T11922 | T11923 | punct | (,3A |
R2937 | T11991 | T11987 | pobj | p53,of |
R2938 | T11992 | T11991 | punct | (,p53 |
R2939 | T11923 | T11912 | parataxis | 3A,detected |
R2940 | T11993 | T11991 | appos | p53WT,p53 |
R2941 | T11994 | T11991 | punct | ),p53 |
R2942 | T11995 | T11991 | prep | in,p53 |
R2943 | T11924 | T11923 | compound | Figure,3A |
R2944 | T11996 | T11997 | amod | unstressed,cells |
R2945 | T11997 | T11995 | pobj | cells,in |
R2946 | T11998 | T11973 | punct | ", ",were |
R2947 | T11925 | T11923 | punct | ),3A |
R2948 | T11999 | T11973 | cc | and,were |
R2949 | T12000 | T12001 | aux | did,vary |
R2950 | T12001 | T11973 | conj | vary,were |
R2951 | T11926 | T11905 | punct | .,proved |
R2952 | T12002 | T12001 | neg | not,vary |
R2953 | T12003 | T12001 | advmod | significantly,vary |
R2954 | T11928 | T11929 | nmod | p53,GFP |
R2955 | T12004 | T12001 | prep | after,vary |
R2956 | T12005 | T12006 | compound | DNA,damage |
R2957 | T12006 | T12004 | pobj | damage,after |
R2958 | T12007 | T12001 | punct | ", ",vary |
R2959 | T12008 | T12009 | mark | so,were |
R2960 | T11929 | T11932 | compound | GFP,clones |
R2961 | T12009 | T12001 | advcl | were,vary |
R2962 | T12010 | T12009 | mark | that,were |
R2963 | T12011 | T12012 | det | the,levels |
R2964 | T11930 | T11929 | punct | +,GFP |
R2965 | T12012 | T12009 | nsubj | levels,were |
R2966 | T12013 | T12012 | prep | for,levels |
R2967 | T12014 | T12015 | preconj | both,p53WT |
R2968 | T12015 | T12013 | pobj | p53WT,for |
R2969 | T11931 | T11929 | punct | /,GFP |
R2970 | T12016 | T12015 | cc | and,p53WT |
R2971 | T12017 | T12015 | conj | p53GFP,p53WT |
R2972 | T12018 | T12009 | acomp | similar,were |
R2973 | T11932 | T11934 | nsubjpass | clones,analyzed |
R2974 | T12019 | T12009 | prep | after,were |
R2975 | T12020 | T12021 | compound | adriamycin,treatment |
R2976 | T12021 | T12019 | pobj | treatment,after |
R2977 | T11933 | T11932 | compound | ES,clones |
R2978 | T12022 | T12023 | punct | (,3A |
R2979 | T12023 | T12009 | parataxis | 3A,were |
R2980 | T12024 | T12023 | compound | Figure,3A |
R2981 | T11935 | T11934 | auxpass | were,analyzed |
R2982 | T12025 | T12023 | punct | ),3A |
R2983 | T12026 | T11973 | punct | .,were |
R2985 | T11936 | T11934 | prep | by,analyzed |
R2988 | T11937 | T11938 | compound | western,blot |
R2992 | T11938 | T11936 | pobj | blot,by |
R2995 | T11939 | T11934 | prep | with,analyzed |
R2999 | T11940 | T11941 | det | an,antibody |
R3003 | T11941 | T11939 | pobj | antibody,with |
R3006 | T11942 | T11941 | prep | against,antibody |
R3010 | T11943 | T11942 | pobj | p53,against |
R3013 | T11944 | T11934 | punct | ", ",analyzed |
R3016 | T11945 | T11934 | cc | and,analyzed |
R3020 | T11946 | T11934 | conj | found,analyzed |
R3023 | T11947 | T11948 | aux | to,express |
R3025 | T11948 | T11946 | xcomp | express,found |
R3026 | T11949 | T11950 | det | an,band |
R3028 | T11950 | T11948 | dobj | band,express |
R3034 | T11951 | T11950 | amod | additional,band |
R3039 | T11952 | T11948 | prep | at,express |
R3043 | T11953 | T11954 | det | the,size |
R3046 | T11954 | T11952 | pobj | size,at |
R2864 | T11897 | T11896 | compound | RMCE,efficiency |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11419 | 41-49 | CL:0002322 | denotes | ES cells |
T11420 | 44-49 | CL_GO_EXT:cell | denotes | cells |
T11421 | 59-70 | SO_EXT:sequence_substitution_entity_or_process | denotes | replacement |
T11422 | 71-80 | SO_EXT:engineered_biological_sequence | denotes | construct |
T11423 | 81-89 | SO_EXT:sequence_coding_function | denotes | encoding |
T11424 | 90-93 | PR_EXT:000003035 | denotes | p53 |
T11425 | 94-99 | SO_EXT:sequence_fusion_process | denotes | fused |
T11426 | 108-111 | PR_EXT:000003035 | denotes | p53 |
T11427 | 135-138 | PR_EXT:000003035 | denotes | p53 |
T11428 | 158-163 | CL_GO_EXT:cell | denotes | cells |
T11429 | 226-231 | CL_GO_EXT:cell | denotes | cells |
T11430 | 306-312 | CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag | denotes | marker |
T11431 | 318-330 | SO_EXT:sequence_recombinant_entity | denotes | recombinants |
T11432 | 336-344 | SO_EXT:sequence_substitution_process | denotes | exchange |
T11433 | 393-400 | CL:0002322 | denotes | ES cell |
T11434 | 396-400 | CL_GO_EXT:cell | denotes | cell |
T11435 | 401-407 | SO_EXT:sequence_cloned_entity | denotes | clones |
T11436 | 494-496 | GO_PR_EXT:thymidine_kinase | denotes | TK |
T11437 | 521-524 | CHEBI_SO_EXT:DNA | denotes | DNA |
T11438 | 573-585 | SO_EXT:sequence_recombinant_entity | denotes | recombinants |
T11439 | 753-756 | PR_EXT:000003035 | denotes | p53 |
T11440 | 756-757 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T11441 | 762-764 | CL:0002322 | denotes | ES |
T11442 | 765-771 | SO_EXT:sequence_cloned_entity | denotes | clones |
T11443 | 810-818 | GO:0042571 | denotes | antibody |
T11444 | 827-830 | PR_EXT:000003035 | denotes | p53 |
T11445 | 845-852 | GO:0010467 | denotes | express |
T11446 | 925-931 | SO_EXT:sequence_fusion_entity_or_process | denotes | fusion |
T11447 | 942-945 | PR_EXT:000003035 | denotes | p53 |
T11448 | 965-968 | PR_EXT:000003035 | denotes | p53 |
T11449 | 1003-1006 | PR_EXT:000003035 | denotes | p53 |
T11450 | 1041-1050 | SO_EXT:wild_type_entity_or_quality | denotes | wild-type |
T11451 | 1051-1054 | PR_EXT:000003035 | denotes | p53 |
T11452 | 1056-1059 | PR_EXT:000003035 | denotes | p53 |
T11453 | 1059-1061 | SO_EXT:wild_type_entity_or_quality | denotes | WT |
T11454 | 1077-1082 | CL_GO_EXT:cell | denotes | cells |
T11455 | 1121-1124 | CHEBI_SO_EXT:DNA | denotes | DNA |
T11456 | 1161-1164 | PR_EXT:000003035 | denotes | p53 |
T11457 | 1164-1166 | SO_EXT:wild_type_entity_or_quality | denotes | WT |
T11458 | 1171-1174 | PR_EXT:000003035 | denotes | p53 |
T11459 | 1197-1207 | CHEBI:28748 | denotes | adriamycin |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11263 | 41-49 | CL:0002322 | denotes | ES cells |
T11264 | 90-93 | PR:000003035 | denotes | p53 |
T11265 | 108-111 | PR:000003035 | denotes | p53 |
T11266 | 135-138 | PR:000003035 | denotes | p53 |
T11267 | 393-400 | CL:0002322 | denotes | ES cell |
T11268 | 753-756 | PR:000003035 | denotes | p53 |
T11269 | 762-764 | CL:0002322 | denotes | ES |
T11270 | 810-818 | GO:0042571 | denotes | antibody |
T11271 | 827-830 | PR:000003035 | denotes | p53 |
T11272 | 845-852 | GO:0010467 | denotes | express |
T11273 | 942-945 | PR:000003035 | denotes | p53 |
T11274 | 965-968 | PR:000003035 | denotes | p53 |
T11275 | 1003-1006 | PR:000003035 | denotes | p53 |
T11276 | 1051-1054 | PR:000003035 | denotes | p53 |
T11277 | 1056-1059 | PR:000003035 | denotes | p53 |
T11278 | 1161-1164 | PR:000003035 | denotes | p53 |
T11279 | 1171-1174 | PR:000003035 | denotes | p53 |
T11280 | 1197-1207 | CHEBI:28748 | denotes | adriamycin |