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PMC:1472690 / 5849-6032 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3336 0-7 NN denotes Binding
T3337 8-18 NN denotes activities
T3338 19-21 IN denotes of
T3339 22-26 NN denotes NFκB
T3340 26-27 -COMMA- denotes ,
T3341 28-34 NN denotes NFIL-6
T3342 35-38 CC denotes and
T3343 39-43 NN denotes NFAT
T3344 44-48 IN denotes from
T3345 49-54 JJ denotes human
T3346 55-59 NN denotes PBMC
T3347 60-62 TO denotes to
T3348 63-66 DT denotes the
T3349 67-71 NN denotes TNFα
T3350 71-72 -COMMA- denotes ,
T3351 73-77 NN denotes IL-6
T3352 78-81 CC denotes and
T3353 82-86 NN denotes IFNγ
T3354 87-96 NN denotes promoters
T3355 97-106 VB denotes following
T3356 107-109 DT denotes an
T3357 110-112 FW denotes in
T3358 113-118 FW denotes vitro
T3359 119-130 NN denotes stimulation
T3360 131-132 -LRB- denotes (
T3361 132-133 CD denotes 1
T3362 134-135 NN denotes h
T3363 135-136 -RRB- denotes )
T3364 137-141 IN denotes with
T3365 142-145 NN denotes LPS
T3366 145-146 -COMMA- denotes ,
T3367 147-153 NN denotes TSST-1
T3368 153-154 -COMMA- denotes ,
T3369 155-157 NN denotes GP
T3370 157-158 -COMMA- denotes ,
T3371 159-161 NN denotes GP
T3372 162-163 SYM denotes +
T3373 164-167 NN denotes LPS
T3374 168-171 CC denotes and
T3375 172-174 NN denotes GP
T3376 175-176 SYM denotes +
T3377 177-183 NN denotes TSST-1
R1952 T3337 T3336 arg1Of activities,Binding
R1953 T3337 T3338 arg1Of activities,of
R1954 T3337 T3344 arg1Of activities,from
R1955 T3337 T3347 arg1Of activities,to
R1956 T3339 T3340 arg1Of NFκB,","
R1957 T3340 T3342 arg1Of ",",and
R1958 T3341 T3340 arg2Of NFIL-6,","
R1959 T3342 T3338 arg2Of and,of
R1960 T3343 T3342 arg2Of NFAT,and
R1961 T3346 T3344 arg2Of PBMC,from
R1962 T3346 T3345 arg1Of PBMC,human
R1963 T3349 T3350 arg1Of TNFα,","
R1964 T3350 T3352 arg1Of ",",and
R1965 T3351 T3350 arg2Of IL-6,","
R1966 T3353 T3352 arg2Of IFNγ,and
R1967 T3354 T3347 arg2Of promoters,to
R1968 T3354 T3348 arg1Of promoters,the
R1969 T3354 T3349 arg1Of promoters,TNFα
R1970 T3354 T3351 arg1Of promoters,IL-6
R1971 T3354 T3353 arg1Of promoters,IFNγ
R1972 T3354 T3355 arg1Of promoters,following
R1973 T3358 T3357 arg1Of vitro,in
R1974 T3359 T3355 arg2Of stimulation,following
R1975 T3359 T3356 arg1Of stimulation,an
R1976 T3359 T3358 arg1Of stimulation,vitro
R1977 T3359 T3360 arg1Of stimulation,(
R1978 T3359 T3364 arg1Of stimulation,with
R1979 T3362 T3360 arg2Of h,(
R1980 T3362 T3361 arg1Of h,1
R1981 T3363 T3360 arg3Of ),(
R1982 T3365 T3366 arg1Of LPS,","
R1983 T3366 T3368 arg1Of ",",","
R1984 T3367 T3366 arg2Of TSST-1,","
R1985 T3368 T3370 arg1Of ",",","
R1986 T3369 T3368 arg2Of GP,","
R1987 T3370 T3374 arg1Of ",",and
R1988 T3373 T3370 arg2Of LPS,","
R1989 T3373 T3371 arg1Of LPS,GP
R1990 T3373 T3372 arg1Of LPS,+
R1991 T3374 T3364 arg2Of and,with
R1992 T3377 T3374 arg2Of TSST-1,and
R1993 T3377 T3375 arg1Of TSST-1,GP
R1994 T3377 T3376 arg1Of TSST-1,+

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3236 28-34 Protein denotes NFIL-6
T3237 39-43 Protein denotes NFAT
T3238 67-71 Protein denotes TNFα
T3239 73-77 Protein denotes IL-6
T3240 82-86 Protein denotes IFNγ
T3241 147-153 Protein denotes TSST-1
T3242 177-183 Protein denotes TSST-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3643 67-71 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T3646 73-77 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T3648 147-153 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T3649 177-183 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-MF

Id Subject Object Predicate Lexical cue
T3265 0-7 http://purl.obolibrary.org/obo/GO_0005488 denotes Binding
T3273 73-77 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T3157 0-183 Sentence denotes Binding activities of NFκB, NFIL-6 and NFAT from human PBMC to the TNFα, IL-6 and IFNγ promoters following an in vitro stimulation (1 h) with LPS, TSST-1, GP, GP + LPS and GP + TSST-1
T42 0-183 Sentence denotes Binding activities of NFκB, NFIL-6 and NFAT from human PBMC to the TNFα, IL-6 and IFNγ promoters following an in vitro stimulation (1 h) with LPS, TSST-1, GP, GP + LPS and GP + TSST-1

simple1

Id Subject Object Predicate Lexical cue
T3307 28-34 Protein denotes NFIL-6
T3308 39-43 Protein denotes NFAT
T3309 67-71 Protein denotes TNFα
T3310 73-77 Protein denotes IL-6
T3311 82-86 Protein denotes IFNγ
T3312 147-153 Protein denotes TSST-1
T3313 177-183 Protein denotes TSST-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4267 28-34 Protein denotes NFIL-6
T4268 39-43 Protein denotes NFAT
T4269 67-71 Protein denotes TNFα
T4270 73-77 Protein denotes IL-6
T4271 82-86 Protein denotes IFNγ
T4272 147-153 Protein denotes TSST-1
T4273 177-183 Protein denotes TSST-1
T4296 0-7 Binding denotes Binding
T4297 97-106 Positive_regulation denotes following
R2699 T4267 T4297 themeOf NFIL-6,following
R2700 T4267 T4296 themeOf NFIL-6,Binding
R2701 T4268 T4296 themeOf NFAT,Binding
R2702 T4270 T4296 themeOf IL-6,Binding
R2703 T4271 T4296 themeOf IFNγ,Binding

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3665 28-34 Protein denotes NFIL-6
T3666 39-43 Protein denotes NFAT
T3667 67-71 Protein denotes TNFα
T3668 73-77 Protein denotes IL-6
T3669 82-86 Protein denotes IFNγ
T3670 147-153 Protein denotes TSST-1
T3671 177-183 Protein denotes TSST-1
T3694 0-7 Binding denotes Binding
T3695 97-106 Positive_regulation denotes following
R2264 T3665 T3695 themeOf NFIL-6,following
R2265 T3665 T3694 themeOf NFIL-6,Binding
R2266 T3666 T3694 themeOf NFAT,Binding
R2267 T3668 T3694 themeOf IL-6,Binding

DLUT931

Id Subject Object Predicate Lexical cue
T3760 28-34 Protein denotes NFIL-6
T3761 39-43 Protein denotes NFAT
T3762 67-71 Protein denotes TNFα
T3763 73-77 Protein denotes IL-6
T3764 82-86 Protein denotes IFNγ
T3765 147-153 Protein denotes TSST-1
T3766 177-183 Protein denotes TSST-1
T3789 0-7 Binding denotes Binding
T3790 8-18 Positive_regulation denotes activities
R2317 T3760 T3789 themeOf NFIL-6,Binding
R2318 T3760 T3790 themeOf NFIL-6,activities
R2319 T3761 T3789 themeOf NFAT,Binding
R2320 T3761 T3790 themeOf NFAT,activities
R2321 T3762 T3789 themeOf TNFα,Binding
R2322 T3762 T3789 themeOf TNFα,Binding
R2323 T3763 T3790 themeOf IL-6,activities
R2338 T3789 T3790 themeOf Binding,activities
R2339 T3789 T3790 themeOf Binding,activities

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4206 73-77 Protein denotes IL-6
T4208 73-146 Entity denotes IL-6 and IFNγ promoters following an in vitro stimulation (1 h) with LPS,
T4209 147-161 Protein denotes TSST-1, GP, GP
T4213 49-71 Entity denotes human PBMC to the TNFα
T4218 63-71 Protein denotes the TNFα
T4224 39-43 Protein denotes NFAT
T4229 132-135 Entity denotes 1 h
T4230 142-146 Entity denotes LPS,
T4239 147-158 Protein denotes TSST-1, GP,
T4244 177-183 Protein denotes TSST-1
T4253 22-26 Protein denotes NFκB
T4257 82-86 Protein denotes IFNγ
T4258 28-34 Protein denotes NFIL-6
T4262 172-174 Protein denotes GP
T4263 164-167 Entity denotes LPS

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3832 0-7 VBG denotes Binding
T3833 8-18 NNS denotes activities
T3834 19-21 IN denotes of
T3835 22-26 NNP denotes NFκB
T3836 26-27 , denotes ,
T3837 28-34 NNP denotes NFIL-6
T3838 35-38 CC denotes and
T3839 39-43 NNP denotes NFAT
T3840 44-48 IN denotes from
T3841 49-54 JJ denotes human
T3842 55-59 NNP denotes PBMC
T3843 60-62 TO denotes to
T3844 63-66 DT denotes the
T3845 67-71 NNP denotes TNFα
T3846 71-72 , denotes ,
T3847 73-77 NNP denotes IL-6
T3848 78-81 CC denotes and
T3849 82-86 NNP denotes IFNγ
T3850 87-96 NNS denotes promoters
T3851 97-106 VBG denotes following
T3852 107-109 DT denotes an
T3853 110-112 IN denotes in
T3854 113-118 NN denotes vitro
T3855 119-130 NN denotes stimulation
T3856 131-132 -LRB- denotes (
T3857 132-133 CD denotes 1
T3858 134-135 NN denotes h
T3859 135-136 -RRB- denotes )
T3860 137-141 IN denotes with
T3861 142-145 NNP denotes LPS
T3862 145-146 , denotes ,
T3863 147-153 NNP denotes TSST-1
T3864 153-154 , denotes ,
T3865 155-157 NNP denotes GP
T3866 157-158 , denotes ,
T3867 159-161 NNP denotes GP
T3868 162-163 NNP denotes +
T3869 164-167 NNP denotes LPS
T3870 168-171 CC denotes and
T3871 172-174 NNP denotes GP
T3872 175-176 NNP denotes +
T3873 177-183 NNP denotes TSST-1
R2346 T3832 T3833 compound Binding,activities
R2348 T3834 T3833 prep of,activities
R2349 T3835 T3834 pobj NFκB,of
R2350 T3836 T3835 punct ",",NFκB
R2351 T3837 T3835 conj NFIL-6,NFκB
R2352 T3838 T3837 cc and,NFIL-6
R2353 T3839 T3837 conj NFAT,NFIL-6
R2354 T3840 T3833 prep from,activities
R2355 T3841 T3842 compound human,PBMC
R2356 T3842 T3840 pobj PBMC,from
R2357 T3843 T3833 prep to,activities
R2358 T3844 T3845 det the,TNFα
R2359 T3845 T3843 pobj TNFα,to
R2360 T3846 T3845 punct ",",TNFα
R2361 T3847 T3845 conj IL-6,TNFα
R2362 T3848 T3847 cc and,IL-6
R2363 T3849 T3847 conj IFNγ,IL-6
R2364 T3850 T3833 conj promoters,activities
R2365 T3851 T3833 acl following,activities
R2366 T3852 T3858 det an,h
R2367 T3853 T3858 nmod in,h
R2368 T3854 T3855 amod vitro,stimulation
R2369 T3855 T3853 pobj stimulation,in
R2370 T3856 T3858 punct (,h
R2371 T3857 T3858 nummod 1,h
R2372 T3858 T3851 pobj h,following
R2373 T3859 T3833 punct ),activities
R2374 T3860 T3833 prep with,activities
R2375 T3861 T3860 pobj LPS,with
R2376 T3862 T3861 punct ",",LPS
R2377 T3863 T3861 conj TSST-1,LPS
R2378 T3864 T3863 punct ",",TSST-1
R2379 T3865 T3863 conj GP,TSST-1
R2380 T3866 T3865 punct ",",GP
R2381 T3867 T3869 compound GP,LPS
R2382 T3868 T3869 compound +,LPS
R2383 T3869 T3865 conj LPS,GP
R2384 T3870 T3869 cc and,LPS

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3704 22-26 Protein denotes NFκB
T3705 28-34 Protein denotes NFIL-6
T3706 39-43 Protein denotes NFAT
T3707 67-71 Protein denotes TNFα
T3708 73-77 Protein denotes IL-6
T3709 82-96 Protein denotes IFNγ promoters
T3710 8-18 Positive_regulation denotes activities
R2283 T3709 T3710 themeOf IFNγ promoters,activities

testone

Id Subject Object Predicate Lexical cue
T3036 28-34 Protein denotes NFIL-6
T3037 39-43 Protein denotes NFAT
T3038 67-71 Protein denotes TNFα
T3039 73-77 Protein denotes IL-6
T3040 82-86 Protein denotes IFNγ
T3041 147-153 Protein denotes TSST-1
T3042 177-183 Protein denotes TSST-1
T3065 0-7 Binding denotes Binding
T3066 87-96 Entity denotes promoters
T3067 97-106 Positive_regulation denotes following
R1842 T3036 T3065 themeOf NFIL-6,Binding
R1843 T3037 T3065 themeOf NFAT,Binding
R1844 T3039 T3065 themeOf IL-6,Binding
R1845 T3041 T3067 causeOf TSST-1,following
R1846 T3042 T3067 causeOf TSST-1,following
R1857 T3066 T3040 partOf promoters,IFNγ
R1858 T3066 T3065 themeOf promoters,Binding
R1859 T3066 T3038 partOf promoters,TNFα

test3

Id Subject Object Predicate Lexical cue
T3084 28-34 Protein denotes NFIL-6
T3085 39-43 Protein denotes NFAT
T3086 67-71 Protein denotes TNFα
T3087 73-77 Protein denotes IL-6
T3088 82-86 Protein denotes IFNγ
T3089 147-153 Protein denotes TSST-1
T3090 177-183 Protein denotes TSST-1
T3113 0-7 Binding denotes Binding
T3114 28-34 Protein denotes NFIL-6
T3115 39-43 Protein denotes NFAT
T3116 67-71 Protein denotes TNFα
T3117 73-77 Protein denotes IL-6
T3118 82-86 Protein denotes IFNγ
T3119 87-96 Entity denotes promoters
T3120 97-106 Positive_regulation denotes following
T3121 147-153 Protein denotes TSST-1
R1869 T3114 T3113 themeOf NFIL-6,Binding
R1870 T3115 T3113 themeOf NFAT,Binding
R1871 T3119 T3116 partOf promoters,TNFα
R1872 T3119 T3113 themeOf promoters,Binding
R1873 T3121 T3120 causeOf TSST-1,following