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PMC:1472690 / 23739-24145 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12851 403-405 NN denotes GP
T12850 400-402 IN denotes by
T12849 390-399 NN denotes phenotype
T12848 372-389 JJ denotes anti-inflammatory
T12847 369-371 DT denotes an
T12846 366-368 TO denotes to
T12845 357-365 VB denotes switched
T12844 354-356 VB denotes is
T12843 343-353 NN denotes leukocytes
T12842 337-342 JJ denotes human
T12841 334-336 IN denotes of
T12840 323-333 NN denotes expression
T12839 314-322 NN denotes cytokine
T12838 310-313 CC denotes and
T12837 302-309 NN denotes binding
T12836 295-301 NN denotes factor
T12835 281-294 NN denotes transcription
T12834 264-280 JJ denotes pro-inflammatory
T12833 254-263 NN denotes signaling
T12832 250-253 CC denotes and
T12831 238-249 NN denotes recognition
T12830 235-237 IN denotes of
T12829 224-234 JJ denotes downstream
T12828 219-223 IN denotes that
T12827 210-218 NN denotes evidence
T12826 204-209 JJ denotes novel
T12825 195-203 VB denotes provides
T12824 189-194 NN denotes study
T12823 185-188 PRP-DOLLAR- denotes Our
T12822 182-183 -RRB- denotes ]
T12821 177-182 CD denotes 22,37
T12820 176-177 -LRB- denotes [
T12819 161-175 NN denotes PI3K-signaling
T12818 158-160 TO denotes to
T12817 152-157 NN denotes NFκB-
T12816 147-151 IN denotes from
T12815 141-146 NN denotes shift
T12814 135-140 JJ denotes rapid
T12813 133-134 DT denotes a
T12812 129-132 IN denotes via
T12811 127-128 -COMMA- denotes ,
T12810 123-127 NN denotes part
T12809 120-122 IN denotes in
T12808 118-119 -COMMA- denotes ,
T12807 108-118 NN denotes mechanisms
T12806 97-107 JJ denotes protective
T12805 93-96 PRP-DOLLAR- denotes its
T12804 84-92 VB denotes mediates
T12803 81-83 NN denotes GP
T12802 76-80 IN denotes like
T12801 61-75 NN denotes β-1→3-D-glucan
T12800 59-60 DT denotes a
T12799 54-58 IN denotes that
T12798 46-53 VB denotes suggest
T12797 39-45 NN denotes injury
T12796 28-38 JJ denotes myocardial
T12795 24-27 CC denotes and
T12794 17-23 NN denotes sepsis
T12793 14-16 IN denotes of
T12792 7-13 NN denotes models
T12791 0-6 NN denotes Animal
R7949 T12792 T12791 arg1Of models,Animal
R7950 T12792 T12793 arg1Of models,of
R7951 T12792 T12798 arg1Of models,suggest
R7952 T12794 T12795 arg1Of sepsis,and
R7953 T12795 T12793 arg2Of and,of
R7954 T12797 T12795 arg2Of injury,and
R7955 T12797 T12796 arg1Of injury,myocardial
R7956 T12801 T12800 arg1Of β-1→3-D-glucan,a
R7957 T12801 T12802 arg1Of β-1→3-D-glucan,like
R7958 T12801 T12804 arg1Of β-1→3-D-glucan,mediates
R7959 T12803 T12802 arg2Of GP,like
R7960 T12804 T12798 arg2Of mediates,suggest
R7961 T12804 T12799 arg1Of mediates,that
R7962 T12804 T12808 arg1Of mediates,","
R7963 T12804 T12809 arg1Of mediates,in
R7964 T12804 T12811 arg1Of mediates,","
R7965 T12804 T12812 arg1Of mediates,via
R7966 T12804 T12820 arg1Of mediates,[
R7967 T12807 T12804 arg2Of mechanisms,mediates
R7968 T12807 T12805 arg1Of mechanisms,its
R7969 T12807 T12806 arg1Of mechanisms,protective
R7970 T12810 T12809 arg2Of part,in
R7971 T12815 T12812 arg2Of shift,via
R7972 T12815 T12813 arg1Of shift,a
R7973 T12815 T12814 arg1Of shift,rapid
R7974 T12815 T12816 arg1Of shift,from
R7975 T12815 T12818 arg1Of shift,to
R7976 T12817 T12816 arg2Of NFκB-,from
R7977 T12819 T12818 arg2Of PI3K-signaling,to
R7978 T12821 T12820 arg2Of "22,37",[
R7979 T12822 T12820 arg3Of ],[
R7980 T12824 T12823 arg1Of study,Our
R7981 T12824 T12825 arg1Of study,provides
R7982 T12825 T12832 arg1Of provides,and
R7983 T12827 T12825 arg2Of evidence,provides
R7984 T12827 T12826 arg1Of evidence,novel
R7985 T12827 T12829 arg1Of evidence,downstream
R7986 T12829 T12828 arg1Of downstream,that
R7987 T12829 T12830 arg1Of downstream,of
R7988 T12831 T12830 arg2Of recognition,of
R7989 T12837 T12833 arg1Of binding,signaling
R7990 T12837 T12834 arg1Of binding,pro-inflammatory
R7991 T12837 T12835 arg1Of binding,transcription
R7992 T12837 T12836 arg1Of binding,factor
R7993 T12837 T12838 arg1Of binding,and
R7994 T12838 T12844 arg1Of and,is
R7995 T12838 T12845 arg2Of and,switched
R7996 T12840 T12838 arg2Of expression,and
R7997 T12840 T12839 arg1Of expression,cytokine
R7998 T12840 T12841 arg1Of expression,of
R7999 T12843 T12841 arg2Of leukocytes,of
R8000 T12843 T12842 arg1Of leukocytes,human
R8001 T12845 T12832 arg2Of switched,and
R8002 T12845 T12844 arg2Of switched,is
R8003 T12845 T12846 arg1Of switched,to
R8004 T12849 T12846 arg2Of phenotype,to
R8005 T12849 T12847 arg1Of phenotype,an
R8006 T12849 T12848 arg1Of phenotype,anti-inflammatory
R8007 T12849 T12850 arg1Of phenotype,by
R8008 T12851 T12850 arg2Of GP,by

GO-BP

Id Subject Object Predicate Lexical cue
T11910 281-294 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T11901 254-263 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T11900 166-175 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T11899 161-175 http://purl.obolibrary.org/obo/GO_0014065 denotes PI3K-signaling
T11892 161-165 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K

GO-MF

Id Subject Object Predicate Lexical cue
T12549 302-322 http://purl.obolibrary.org/obo/GO_0019955 denotes binding and cytokine
T12526 302-309 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T12519 161-165 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K

sentences

Id Subject Object Predicate Lexical cue
T11852 185-406 Sentence denotes Our study provides novel evidence that downstream of recognition and signaling pro-inflammatory transcription factor binding and cytokine expression of human leukocytes is switched to an anti-inflammatory phenotype by GP.
T11851 0-184 Sentence denotes Animal models of sepsis and myocardial injury suggest that a β-1→3-D-glucan like GP mediates its protective mechanisms, in part, via a rapid shift from NFκB- to PI3K-signaling [22,37].
T178 0-184 Sentence denotes Animal models of sepsis and myocardial injury suggest that a β-1→3-D-glucan like GP mediates its protective mechanisms, in part, via a rapid shift from NFκB- to PI3K-signaling [22,37].
T179 185-406 Sentence denotes Our study provides novel evidence that downstream of recognition and signaling pro-inflammatory transcription factor binding and cytokine expression of human leukocytes is switched to an anti-inflammatory phenotype by GP.

ICD10

Id Subject Object Predicate Lexical cue
T12518 39-45 http://purl.bioontology.org/ontology/ICD10/T14.9 denotes injury

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16911 161-183 Protein denotes PI3K-signaling [22,37]
T16893 403-405 Protein denotes GP
T16872 334-353 Entity denotes of human leukocytes
T16766 314-322 Protein denotes cytokine
T16765 81-83 Protein denotes GP
T16695 152-157 Protein denotes NFκB-

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14880 405-406 . denotes .
T14879 403-405 NNP denotes GP
T14878 400-402 IN denotes by
T14877 390-399 NN denotes phenotype
T14876 372-389 JJ denotes anti-inflammatory
T14875 369-371 DT denotes an
T14874 366-368 TO denotes to
T14873 357-365 VBN denotes switched
T14872 354-356 VBZ denotes is
T14871 343-353 NNS denotes leukocytes
T14870 337-342 JJ denotes human
T14869 334-336 IN denotes of
T14868 323-333 NN denotes expression
T14867 314-322 JJ denotes cytokine
T14866 310-313 CC denotes and
T14865 302-309 JJ denotes binding
T14864 295-301 NN denotes factor
T14863 281-294 NN denotes transcription
T14862 264-280 JJ denotes pro-inflammatory
T14861 254-263 VBG denotes signaling
T14860 250-253 CC denotes and
T14859 238-249 NN denotes recognition
T14858 235-237 IN denotes of
T14857 224-234 JJ denotes downstream
T14856 219-223 IN denotes that
T14855 210-218 NN denotes evidence
T14854 204-209 JJ denotes novel
T14853 195-203 VBZ denotes provides
T14852 189-194 NN denotes study
T14851 185-188 PRP$ denotes Our
T14850 183-184 . denotes .
T14849 182-183 NNP denotes ]
T14848 177-182 CD denotes 22,37
T14847 176-177 NNP denotes [
T14846 161-175 JJ denotes PI3K-signaling
T14845 158-160 TO denotes to
T14844 156-157 : denotes -
T14843 152-156 NNP denotes NFκB
T14842 147-151 IN denotes from
T14841 141-146 NN denotes shift
T14840 135-140 JJ denotes rapid
T14839 133-134 DT denotes a
T14838 129-132 IN denotes via
T14837 127-128 , denotes ,
T14836 123-127 NN denotes part
T14835 120-122 IN denotes in
T14834 118-119 , denotes ,
T14833 108-118 NNS denotes mechanisms
T14832 97-107 JJ denotes protective
T14831 93-96 PRP$ denotes its
T14830 84-92 VBZ denotes mediates
T14829 81-83 NNP denotes GP
T14828 76-80 IN denotes like
T14827 65-75 NN denotes 3-D-glucan
T14826 64-65 NN denotes →
T14825 61-64 JJ denotes β-1
T14824 59-60 DT denotes a
T14823 54-58 IN denotes that
T14822 46-53 VBP denotes suggest
T14821 39-45 NN denotes injury
T14820 28-38 JJ denotes myocardial
T14819 24-27 CC denotes and
T14818 17-23 NN denotes sepsis
T14817 14-16 IN denotes of
T14816 7-13 NNS denotes models
T14815 0-6 NNP denotes Animal
R9732 T14815 T14816 compound Animal,models
R9733 T14816 T14822 nsubj models,suggest
R9735 T14817 T14816 prep of,models
R9736 T14818 T14817 pobj sepsis,of
R9737 T14819 T14818 cc and,sepsis
R9739 T14820 T14821 amod myocardial,injury
R9740 T14821 T14818 conj injury,sepsis
R9741 T14822 T14822 ROOT suggest,suggest
R9742 T14823 T14830 mark that,mediates
R9743 T14824 T14827 det a,3-D-glucan
R9744 T14825 T14827 amod β-1,3-D-glucan
R9745 T14826 T14827 compound →,3-D-glucan
R9746 T14827 T14830 nsubj 3-D-glucan,mediates
R9747 T14828 T14830 mark like,mediates
R9748 T14829 T14830 nsubj GP,mediates
R9749 T14830 T14822 ccomp mediates,suggest
R9750 T14831 T14833 poss its,mechanisms
R9751 T14832 T14833 amod protective,mechanisms
R9752 T14833 T14830 dobj mechanisms,mediates
R9753 T14834 T14833 punct ",",mechanisms
R9754 T14835 T14830 prep in,mediates
R9755 T14836 T14835 pobj part,in
R9756 T14837 T14822 punct ",",suggest
R9757 T14838 T14822 prep via,suggest
R9758 T14839 T14841 det a,shift
R9759 T14840 T14841 amod rapid,shift
R9760 T14841 T14838 pobj shift,via
R9761 T14842 T14841 prep from,shift
R9762 T14843 T14842 pobj NFκB,from
R9763 T14844 T14822 punct -,suggest
R9764 T14845 T14846 aux to,PI3K-signaling
R9765 T14846 T14822 xcomp PI3K-signaling,suggest
R9767 T14847 T14849 compound [,]
R9768 T14848 T14849 compound "22,37",]
R9769 T14849 T14846 appos ],PI3K-signaling
R9770 T14850 T14822 punct .,suggest
R9771 T14851 T14852 poss Our,study
R9773 T14852 T14853 nsubj study,provides
R9774 T14853 T14853 ROOT provides,provides
R9775 T14854 T14855 amod novel,evidence
R9776 T14855 T14853 dobj evidence,provides
R9777 T14856 T14873 mark that,switched
R9779 T14857 T14868 amod downstream,expression
R9780 T14858 T14857 prep of,downstream
R9781 T14859 T14858 pobj recognition,of
R9782 T14860 T14857 cc and,downstream
R9784 T14861 T14868 amod signaling,expression
R9786 T14862 T14864 amod pro-inflammatory,factor
R9787 T14863 T14864 compound transcription,factor
R9788 T14864 T14865 nsubj factor,binding
R9789 T14865 T14861 ccomp binding,signaling
R9790 T14866 T14865 cc and,binding
R9791 T14867 T14865 conj cytokine,binding
R9792 T14868 T14873 nsubjpass expression,switched
R9794 T14869 T14868 prep of,expression
R9795 T14870 T14871 amod human,leukocytes
R9796 T14871 T14869 pobj leukocytes,of
R9799 T14872 T14873 auxpass is,switched
R9800 T14873 T14855 acl switched,evidence
R9801 T14874 T14873 prep to,switched
R9802 T14875 T14877 det an,phenotype
R9803 T14876 T14877 amod anti-inflammatory,phenotype
R9804 T14877 T14874 pobj phenotype,to
R9806 T14878 T14877 prep by,phenotype
R9807 T14879 T14878 pobj GP,by
R9808 T14880 T14853 punct .,provides

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T11940 161-165 Protein denotes PI3K
T11939 152-156 Protein denotes NFκB