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PMC:1472690 / 18873-19656 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T24436 781-782 -RRB- denotes )
T24435 775-781 NN denotes TSST-1
T24434 773-774 SYM denotes +
T24433 770-772 NN denotes GP
T24432 768-769 -COLON- denotes :
T24431 767-768 CD denotes 7
T24430 762-766 NN denotes lane
T24429 760-761 -COLON- denotes ;
T24428 757-760 NN denotes LPS
T24427 755-756 CC denotes +
T24426 752-754 NN denotes GP
T24425 750-751 -COLON- denotes :
T24424 749-750 CD denotes 6
T24423 744-748 NN denotes lane
T24422 742-743 -COMMA- denotes ,
T24421 736-742 NN denotes TSST-1
T24420 734-735 -COLON- denotes :
T24419 733-734 CD denotes 5
T24418 728-732 NN denotes lane
T24417 726-727 -COLON- denotes ;
T24416 723-726 NN denotes LPS
T24415 721-722 -COLON- denotes :
T24414 720-721 CD denotes 4
T24413 715-719 NN denotes lane
T24412 713-714 -COLON- denotes ;
T24411 711-713 NN denotes GP
T24410 709-710 -COLON- denotes :
T24409 708-709 CD denotes 3
T24408 703-707 NN denotes lane
T24407 701-702 -COLON- denotes ;
T24406 694-701 NN denotes control
T24405 687-693 NN denotes medium
T24404 685-686 -COLON- denotes :
T24403 684-685 CD denotes 2
T24402 679-683 NN denotes lane
T24401 677-678 -COLON- denotes ;
T24400 672-677 NN denotes water
T24399 670-671 -COLON- denotes :
T24398 669-670 CD denotes 1
T24397 664-668 NN denotes lane
T24396 663-664 -LRB- denotes (
T24395 657-662 NN denotes panel
T24394 651-656 JJ denotes lower
T24393 647-650 DT denotes the
T24392 644-646 IN denotes in
T24391 638-643 VB denotes shown
T24390 635-637 VB denotes is
T24389 624-634 NN denotes experiment
T24388 609-623 JJ denotes representative
T24387 607-608 DT denotes a
T24386 604-606 IN denotes of
T24385 590-603 NN denotes autoradiogram
T24384 587-589 DT denotes An
T24383 584-585 -RRB- denotes )
T24382 583-584 CD denotes 6
T24381 581-582 JJ denotes =
T24380 579-580 NN denotes n
T24379 578-579 -LRB- denotes (
T24378 574-577 NN denotes SEM
T24377 572-573 CC denotes ±
T24376 570-571 CD denotes 1
T24375 567-569 TO denotes to
T24374 561-566 JJ denotes equal
T24373 557-560 VB denotes set
T24372 552-556 VB denotes were
T24371 545-551 NN denotes levels
T24370 537-544 NN denotes control
T24369 530-536 NN denotes Medium
T24368 523-528 VB denotes added
T24367 519-522 VB denotes are
T24366 513-518 NN denotes calc.
T24365 503-512 NN denotes GP/TSST-1
T24364 499-502 CC denotes and
T24363 493-498 NN denotes calc.
T24362 486-492 NN denotes GP/LPS
T24361 482-485 IN denotes for
T24360 475-481 NN denotes values
T24359 463-474 JJ denotes theoretical
T24358 459-462 DT denotes the
T24357 449-458 VB denotes depicting
T24356 444-448 NN denotes Bars
T24355 434-442 NN denotes promoter
T24354 427-433 NN denotes IL-1RA
T24353 423-426 DT denotes the
T24352 420-422 IN denotes in
T24351 415-419 NN denotes site
T24350 411-414 DT denotes the
T24349 408-410 TO denotes to
T24348 399-407 NN denotes activity
T24347 391-398 NN denotes binding
T24346 382-390 NN denotes NFAT-DNA
T24345 373-381 JJ denotes elevated
T24344 369-372 DT denotes the
T24343 366-368 IN denotes of
T24342 351-365 NN denotes representation
T24341 341-350 NNP denotes Schematic
T24340 335-340 NNP denotes 37°C.
T24339 332-334 IN denotes at
T24338 330-331 NN denotes h
T24337 328-329 CD denotes 1
T24336 324-327 IN denotes for
T24335 320-323 NN denotes LPS
T24334 318-319 SYM denotes +
T24333 315-317 NN denotes GP
T24332 311-314 CC denotes and
T24331 304-310 NN denotes TSST-1
T24330 302-303 SYM denotes +
T24329 299-301 NN denotes GP
T24328 297-298 -COMMA- denotes ,
T24327 295-297 NN denotes GP
T24326 293-294 -COMMA- denotes ,
T24325 287-293 NN denotes TSST-1
T24324 285-286 -COMMA- denotes ,
T24323 282-285 NN denotes LPS
T24322 280-281 -COMMA- denotes ,
T24321 273-280 NN denotes control
T24320 266-272 NN denotes medium
T24319 261-265 IN denotes with
T24318 251-260 VB denotes incubated
T24317 246-250 VB denotes were
T24316 241-245 NN denotes PBMC
T24315 235-240 JJ denotes Human
T24314 232-233 -RRB- denotes )
T24313 228-232 CD denotes 0.05
T24300 184-190 JJ denotes latter
T24299 180-183 DT denotes the
T24298 177-179 IN denotes in
T24297 175-176 -COMMA- denotes ,
T24296 172-175 CC denotes and
T24295 169-171 NN denotes GP
T24294 166-168 TO denotes to
T24293 157-165 VB denotes compared
T24292 152-156 WRB denotes when
T24291 150-151 -COMMA- denotes ,
T24290 144-150 NN denotes TSST-1
T24289 142-143 SYM denotes +
T24288 139-141 NN denotes GP
T24287 135-138 CC denotes and
T24286 131-134 NN denotes LPS
T24285 129-130 SYM denotes +
T24284 126-128 NN denotes GP
T24283 122-125 IN denotes for
T24282 109-121 VB denotes up-regulated
T24281 105-108 VB denotes was
T24280 97-104 NN denotes Binding
T24279 87-95 NN denotes promoter
T24278 80-86 NN denotes IL-1RA
T24277 76-79 DT denotes the
T24276 73-75 IN denotes in
T24275 68-72 NN denotes site
T24274 59-67 NN denotes NFATP2/3
T24273 55-58 JJ denotes new
T24272 53-54 DT denotes a
T24271 50-52 TO denotes to
T24270 42-49 NN denotes binding
T24269 38-41 NN denotes DNA
T24268 23-37 JJ denotes TSST-1-induced
T24267 13-22 VB denotes modulated
T24266 10-12 NN denotes GP
T24312 226-227 SYM denotes <
T24311 224-225 NN denotes p
T24310 222-223 SYM denotes =
T24309 220-221 SYM denotes *
T24308 219-220 -LRB- denotes (
T24307 212-218 NN denotes TSST-1
T24306 208-211 CC denotes and
T24305 205-207 NN denotes GP
T24304 200-204 CC denotes both
T24303 197-199 TO denotes to
T24302 195-196 -COMMA- denotes ,
T24301 191-195 NN denotes case
R16477 T24266 T24267 arg1Of GP,modulated
R16478 T24270 T24267 arg2Of binding,modulated
R16479 T24270 T24268 arg1Of binding,TSST-1-induced
R16480 T24270 T24269 arg1Of binding,DNA
R16481 T24270 T24271 arg1Of binding,to
R16482 T24275 T24271 arg2Of site,to
R16483 T24275 T24272 arg1Of site,a
R16484 T24275 T24273 arg1Of site,new
R16485 T24275 T24274 arg1Of site,NFATP2/3
R16486 T24275 T24276 arg1Of site,in
R16487 T24279 T24276 arg2Of promoter,in
R16488 T24279 T24277 arg1Of promoter,the
R16489 T24279 T24278 arg1Of promoter,IL-1RA
R16490 T24280 T24281 arg1Of Binding,was
R16491 T24280 T24282 arg2Of Binding,up-regulated
R16492 T24282 T24281 arg2Of up-regulated,was
R16493 T24282 T24283 arg1Of up-regulated,for
R16494 T24282 T24291 arg1Of up-regulated,","
R16495 T24282 T24292 arg1Of up-regulated,when
R16496 T24286 T24284 arg1Of LPS,GP
R16497 T24286 T24285 arg1Of LPS,+
R16498 T24286 T24287 arg1Of LPS,and
R16499 T24287 T24283 arg2Of and,for
R16500 T24290 T24287 arg2Of TSST-1,and
R16501 T24290 T24288 arg1Of TSST-1,GP
R16502 T24290 T24289 arg1Of TSST-1,+
R16503 T24293 T24292 arg2Of compared,when
R16504 T24293 T24294 arg1Of compared,to
R16505 T24293 T24298 arg1Of compared,in
R16506 T24293 T24302 arg1Of compared,","
R16507 T24293 T24303 arg1Of compared,to
R16508 T24294 T24296 arg1Of to,and
R16509 T24294 T24297 arg1Of to,","
R16510 T24295 T24294 arg2Of GP,to
R16511 T24298 T24297 arg2Of in,","
R16512 T24301 T24298 arg2Of case,in
R16513 T24301 T24299 arg1Of case,the
R16514 T24301 T24300 arg1Of case,latter
R16515 T24305 T24306 arg1Of GP,and
R16516 T24306 T24303 arg2Of and,to
R16517 T24306 T24304 arg1Of and,both
R16518 T24306 T24308 arg1Of and,(
R16519 T24307 T24306 arg2Of TSST-1,and
R16520 T24311 T24308 arg2Of p,(
R16521 T24311 T24309 arg1Of p,*
R16522 T24311 T24310 arg1Of p,=
R16523 T24311 T24312 arg1Of p,<
R16524 T24311 T24313 arg1Of p,0.05
R16525 T24314 T24308 arg3Of ),(
R16526 T24316 T24315 arg1Of PBMC,Human
R16527 T24316 T24317 arg1Of PBMC,were
R16528 T24316 T24318 arg2Of PBMC,incubated
R16529 T24318 T24317 arg2Of incubated,were
R16530 T24318 T24319 arg1Of incubated,with
R16531 T24321 T24320 arg1Of control,medium
R16532 T24321 T24322 arg1Of control,","
R16533 T24322 T24324 arg1Of ",",","
R16534 T24323 T24322 arg2Of LPS,","
R16535 T24324 T24326 arg1Of ",",","
R16536 T24325 T24324 arg2Of TSST-1,","
R16537 T24326 T24328 arg1Of ",",","
R16538 T24327 T24326 arg2Of GP,","
R16539 T24328 T24332 arg1Of ",",and
R16540 T24331 T24328 arg2Of TSST-1,","
R16541 T24331 T24329 arg1Of TSST-1,GP
R16542 T24331 T24330 arg1Of TSST-1,+
R16543 T24332 T24319 arg2Of and,with
R16544 T24335 T24332 arg2Of LPS,and
R16545 T24335 T24333 arg1Of LPS,GP
R16546 T24335 T24334 arg1Of LPS,+
R16547 T24335 T24336 arg1Of LPS,for
R16548 T24338 T24336 arg2Of h,for
R16549 T24338 T24337 arg1Of h,1
R16550 T24338 T24339 arg1Of h,at
R16551 T24338 T24349 arg1Of h,to
R16552 T24341 T24340 arg1Of Schematic,37°C.
R16553 T24342 T24339 arg2Of representation,at
R16554 T24342 T24341 arg1Of representation,Schematic
R16555 T24342 T24343 arg1Of representation,of
R16556 T24348 T24343 arg2Of activity,of
R16557 T24348 T24344 arg1Of activity,the
R16558 T24348 T24345 arg1Of activity,elevated
R16559 T24348 T24346 arg1Of activity,NFAT-DNA
R16560 T24348 T24347 arg1Of activity,binding
R16561 T24351 T24349 arg2Of site,to
R16562 T24351 T24350 arg1Of site,the
R16563 T24351 T24352 arg1Of site,in
R16564 T24355 T24352 arg2Of promoter,in
R16565 T24355 T24353 arg1Of promoter,the
R16566 T24355 T24354 arg1Of promoter,IL-1RA
R16567 T24356 T24357 arg1Of Bars,depicting
R16568 T24356 T24367 arg1Of Bars,are
R16569 T24356 T24368 arg2Of Bars,added
R16570 T24360 T24357 arg2Of values,depicting
R16571 T24360 T24358 arg1Of values,the
R16572 T24360 T24359 arg1Of values,theoretical
R16573 T24360 T24361 arg1Of values,for
R16574 T24363 T24362 arg1Of calc.,GP/LPS
R16575 T24363 T24364 arg1Of calc.,and
R16576 T24364 T24361 arg2Of and,for
R16577 T24366 T24364 arg2Of calc.,and
R16578 T24366 T24365 arg1Of calc.,GP/TSST-1
R16579 T24368 T24367 arg2Of added,are
R16580 T24371 T24369 arg1Of levels,Medium
R16581 T24371 T24370 arg1Of levels,control
R16582 T24371 T24372 arg1Of levels,were
R16583 T24371 T24373 arg2Of levels,set
R16584 T24371 T24374 arg1Of levels,equal
R16585 T24373 T24372 arg2Of set,were
R16586 T24374 T24373 arg3Of equal,set
R16587 T24374 T24375 arg1Of equal,to
R16588 T24376 T24377 arg1Of 1,±
R16589 T24377 T24375 arg2Of ±,to
R16590 T24377 T24379 arg1Of ±,(
R16591 T24378 T24377 arg2Of SEM,±
R16592 T24380 T24381 arg1Of n,=
R16593 T24381 T24379 arg2Of =,(
R16594 T24382 T24381 arg2Of 6,=
R16595 T24383 T24379 arg3Of ),(
R16596 T24385 T24384 arg1Of autoradiogram,An
R16597 T24385 T24386 arg1Of autoradiogram,of
R16598 T24385 T24390 arg1Of autoradiogram,is
R16599 T24385 T24391 arg2Of autoradiogram,shown
R16600 T24389 T24386 arg2Of experiment,of
R16601 T24389 T24387 arg1Of experiment,a
R16602 T24389 T24388 arg1Of experiment,representative
R16603 T24391 T24390 arg2Of shown,is
R16604 T24391 T24392 arg1Of shown,in
R16605 T24395 T24392 arg2Of panel,in
R16606 T24395 T24393 arg1Of panel,the
R16607 T24395 T24394 arg1Of panel,lower
R16608 T24395 T24396 arg1Of panel,(
R16609 T24397 T24396 arg2Of lane,(
R16610 T24397 T24398 arg1Of lane,1
R16611 T24397 T24399 arg1Of lane,:
R16612 T24400 T24399 arg2Of water,:
R16613 T24400 T24401 arg1Of water,;
R16614 T24400 T24432 arg1Of water,:
R16615 T24402 T24401 arg2Of lane,;
R16616 T24402 T24403 arg1Of lane,2
R16617 T24402 T24404 arg1Of lane,:
R16618 T24406 T24405 arg1Of control,medium
R16619 T24406 T24407 arg1Of control,;
R16620 T24407 T24404 arg2Of ;,:
R16621 T24407 T24410 arg1Of ;,:
R16622 T24408 T24407 arg2Of lane,;
R16623 T24408 T24409 arg1Of lane,3
R16624 T24411 T24410 arg2Of GP,:
R16625 T24411 T24412 arg1Of GP,;
R16626 T24413 T24412 arg2Of lane,;
R16627 T24413 T24414 arg1Of lane,4
R16628 T24413 T24415 arg1Of lane,:
R16629 T24416 T24415 arg2Of LPS,:
R16630 T24416 T24417 arg1Of LPS,;
R16631 T24416 T24429 arg1Of LPS,;
R16632 T24418 T24417 arg2Of lane,;
R16633 T24418 T24419 arg1Of lane,5
R16634 T24418 T24420 arg1Of lane,:
R16635 T24421 T24420 arg2Of TSST-1,:
R16636 T24421 T24422 arg1Of TSST-1,","
R16637 T24421 T24425 arg1Of TSST-1,:
R16638 T24423 T24422 arg2Of lane,","
R16639 T24423 T24424 arg1Of lane,6
R16640 T24426 T24427 arg1Of GP,+
R16641 T24427 T24425 arg2Of +,:
R16642 T24428 T24427 arg2Of LPS,+
R16643 T24430 T24429 arg2Of lane,;
R16644 T24430 T24431 arg1Of lane,7
R16645 T24433 T24432 arg2Of GP,:
R16646 T24433 T24434 arg1Of GP,+
R16647 T24433 T24435 arg1Of GP,TSST-1
R16648 T24436 T24396 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T24234 775-781 Protein denotes TSST-1
T24233 736-742 Protein denotes TSST-1
T24232 506-512 Protein denotes TSST-1
T24231 427-433 Protein denotes IL-1RA
T24230 382-386 Protein denotes NFAT
T24229 304-310 Protein denotes TSST-1
T24228 287-293 Protein denotes TSST-1
T24227 212-218 Protein denotes TSST-1
T24226 144-150 Protein denotes TSST-1
T24225 80-86 Protein denotes IL-1RA
T24224 23-29 Protein denotes TSST-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T24446 427-433 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T24445 80-86 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T24444 775-781 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24443 736-742 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24442 506-512 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24441 304-310 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24440 287-293 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24439 212-218 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24438 144-150 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24437 23-29 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-MF

Id Subject Object Predicate Lexical cue
T24238 391-398 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T24237 42-49 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T24236 387-398 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T24235 38-49 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding

sentences

Id Subject Object Predicate Lexical cue
T24201 587-783 Sentence denotes An autoradiogram of a representative experiment is shown in the lower panel (lane 1: water; lane 2: medium control; lane 3: GP; lane 4: LPS; lane 5: TSST-1, lane 6: GP + LPS; lane 7: GP + TSST-1).
T24200 530-586 Sentence denotes Medium control levels were set equal to 1 ± SEM (n = 6).
T24199 444-529 Sentence denotes Bars depicting the theoretical values for GP/LPS calc. and GP/TSST-1 calc. are added.
T24198 235-443 Sentence denotes Human PBMC were incubated with medium control, LPS, TSST-1, GP, GP + TSST-1 and GP + LPS for 1 h at 37°C. Schematic representation of the elevated NFAT-DNA binding activity to the site in the IL-1RA promoter.
T24197 97-234 Sentence denotes Binding was up-regulated for GP + LPS and GP + TSST-1, when compared to GP and, in the latter case, to both GP and TSST-1 (* = p < 0.05).
T24196 10-96 Sentence denotes GP modulated TSST-1-induced DNA binding to a new NFATP2/3 site in the IL-1RA promoter.
T141 0-96 Sentence denotes Figure 5 GP modulated TSST-1-induced DNA binding to a new NFATP2/3 site in the IL-1RA promoter.
T142 97-234 Sentence denotes Binding was up-regulated for GP + LPS and GP + TSST-1, when compared to GP and, in the latter case, to both GP and TSST-1 (* = p < 0.05).
T143 235-340 Sentence denotes Human PBMC were incubated with medium control, LPS, TSST-1, GP, GP + TSST-1 and GP + LPS for 1 h at 37°C.
T144 341-443 Sentence denotes Schematic representation of the elevated NFAT-DNA binding activity to the site in the IL-1RA promoter.
T145 444-529 Sentence denotes Bars depicting the theoretical values for GP/LPS calc. and GP/TSST-1 calc. are added.
T146 530-586 Sentence denotes Medium control levels were set equal to 1 ± SEM (n = 6).
T147 587-783 Sentence denotes An autoradiogram of a representative experiment is shown in the lower panel (lane 1: water; lane 2: medium control; lane 3: GP; lane 4: LPS; lane 5: TSST-1, lane 6: GP + LPS; lane 7: GP + TSST-1).

simple1

Id Subject Object Predicate Lexical cue
T24265 775-781 Protein denotes TSST-1
T24264 736-742 Protein denotes TSST-1
T24263 506-512 Protein denotes TSST-1
T24262 427-433 Protein denotes IL-1RA
T24261 382-386 Protein denotes NFAT
T24260 304-310 Protein denotes TSST-1
T24259 287-293 Protein denotes TSST-1
T24258 212-218 Protein denotes TSST-1
T24257 144-150 Protein denotes TSST-1
T24256 80-86 Protein denotes IL-1RA
T24255 23-29 Protein denotes TSST-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T24724 373-381 Positive_regulation denotes elevated
T24723 97-104 Binding denotes Binding
T24722 109-121 Positive_regulation denotes up-regulated
T24721 775-781 Protein denotes TSST-1
T24720 736-742 Protein denotes TSST-1
T24719 506-512 Protein denotes TSST-1
T24718 427-433 Protein denotes IL-1RA
T24717 382-386 Protein denotes NFAT
T24716 304-310 Protein denotes TSST-1
T24715 287-293 Protein denotes TSST-1
T24714 212-218 Protein denotes TSST-1
T24713 144-150 Protein denotes TSST-1
T24712 80-86 Protein denotes IL-1RA
T24711 23-29 Protein denotes TSST-1
R16854 T24714 T24723 themeOf TSST-1,Binding
R16855 T24714 T24722 themeOf TSST-1,up-regulated
R16856 T24717 T24724 themeOf NFAT,elevated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T24459 30-37 Positive_regulation denotes induced
T24458 13-22 Regulation denotes modulated
T24457 775-781 Protein denotes TSST-1
T24456 736-742 Protein denotes TSST-1
T24455 506-512 Protein denotes TSST-1
T24454 427-433 Protein denotes IL-1RA
T24453 382-386 Protein denotes NFAT
T24452 304-310 Protein denotes TSST-1
T24451 287-293 Protein denotes TSST-1
T24450 212-218 Protein denotes TSST-1
T24449 144-150 Protein denotes TSST-1
T24448 80-86 Protein denotes IL-1RA
T24447 23-29 Protein denotes TSST-1
T24463 391-398 Binding denotes binding
T24462 373-381 Positive_regulation denotes elevated
T24461 97-104 Binding denotes Binding
T24460 42-49 Binding denotes binding
R16649 T24447 T24459 causeOf TSST-1,induced
R16650 T24448 T24460 themeOf IL-1RA,binding
R16651 T24450 T24461 themeOf TSST-1,Binding
R16652 T24453 T24462 themeOf NFAT,elevated
R16653 T24453 T24463 themeOf NFAT,binding
R16654 T24459 T24458 themeOf induced,modulated
R16655 T24460 T24458 themeOf binding,modulated
R16656 T24460 T24459 themeOf binding,induced

DLUT931

Id Subject Object Predicate Lexical cue
T24480 373-381 Positive_regulation denotes elevated
T24479 391-398 Binding denotes binding
T24478 109-121 Positive_regulation denotes up-regulated
T24477 97-104 Binding denotes Binding
T24476 30-37 Positive_regulation denotes induced
T24475 42-49 Binding denotes binding
T24474 775-781 Protein denotes TSST-1
T24473 736-742 Protein denotes TSST-1
T24472 506-512 Protein denotes TSST-1
T24471 427-433 Protein denotes IL-1RA
T24470 382-386 Protein denotes NFAT
T24469 304-310 Protein denotes TSST-1
T24468 287-293 Protein denotes TSST-1
T24467 212-218 Protein denotes TSST-1
T24466 144-150 Protein denotes TSST-1
T24465 80-86 Protein denotes IL-1RA
T24464 23-29 Protein denotes TSST-1
R16657 T24464 T24476 causeOf TSST-1,induced
R16658 T24465 T24475 themeOf IL-1RA,binding
R16659 T24467 T24477 themeOf TSST-1,Binding
R16660 T24470 T24479 themeOf NFAT,binding
R16662 T24475 T24476 themeOf binding,induced
R16663 T24477 T24478 themeOf Binding,up-regulated
R16661 T24471 T24479 themeOf IL-1RA,binding
R16664 T24479 T24480 themeOf binding,elevated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T24710 486-492 Entity denotes GP/LPS
T24709 212-218 Protein denotes TSST-1
T24708 235-245 Entity denotes Human PBMC
T24707 489-492 Entity denotes LPS
T24706 736-742 Protein denotes TSST-1
T24705 757-772 Entity denotes LPS; lane 7: GP
T24704 444-497 Protein denotes Bars depicting the theoretical values for GP/LPS calc
T24703 503-517 Protein denotes GP/TSST-1 calc
T24702 23-37 Protein denotes TSST-1-induced
T24701 131-134 Entity denotes LPS
T24700 287-301 Protein denotes TSST-1, GP, GP
T24699 80-86 Protein denotes IL-1RA
T24698 282-285 Entity denotes LPS
T24697 139-141 Protein denotes GP
T24696 506-512 Protein denotes TSST-1
T24695 486-497 Protein denotes GP/LPS calc
T24694 320-339 Entity denotes LPS for 1 h at 37°C
T24693 486-492 Protein denotes GP/LPS
T24692 411-442 Entity denotes the site in the IL-1RA promoter
T24691 723-726 Entity denotes LPS
T24690 287-298 Protein denotes TSST-1, GP,
T24689 427-433 Protein denotes IL-1RA
T24688 304-310 Protein denotes TSST-1
T24687 775-781 Protein denotes TSST-1
T24686 76-95 Entity denotes the IL-1RA promoter
T24685 144-150 Protein denotes TSST-1
T24684 382-398 Protein denotes NFAT-DNA binding
T24683 423-442 Entity denotes the IL-1RA promoter
T24682 126-128 Protein denotes GP
T24681 53-95 Entity denotes a new NFATP2/3 site in the IL-1RA promoter
R16852 T24683 T24689 partOf the IL-1RA promoter,IL-1RA
R16853 T24686 T24699 partOf the IL-1RA promoter,IL-1RA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T24595 486-492 NNP denotes GP/LPS
T24594 482-485 IN denotes for
T24593 475-481 NNS denotes values
T24592 463-474 JJ denotes theoretical
T24591 459-462 DT denotes the
T24590 449-458 VBG denotes depicting
T24589 444-448 NNS denotes Bars
T24588 442-443 . denotes .
T24587 434-442 NN denotes promoter
T24586 427-433 NN denotes IL-1RA
T24585 423-426 DT denotes the
T24584 420-422 IN denotes in
T24583 415-419 NN denotes site
T24582 411-414 DT denotes the
T24581 408-410 TO denotes to
T24580 399-407 NN denotes activity
T24579 391-398 JJ denotes binding
T24578 382-390 NNP denotes NFAT-DNA
T24577 373-381 JJ denotes elevated
T24576 369-372 DT denotes the
T24575 366-368 IN denotes of
T24574 351-365 NN denotes representation
T24573 341-350 NNP denotes Schematic
T24572 338-340 NNP denotes C.
T24571 337-338 CD denotes °
T24570 335-337 CD denotes 37
T24569 332-334 IN denotes at
T24568 330-331 NN denotes h
T24567 328-329 CD denotes 1
T24566 324-327 IN denotes for
T24565 320-323 NNP denotes LPS
T24564 318-319 NNP denotes +
T24563 315-317 NNP denotes GP
T24562 311-314 CC denotes and
T24561 304-310 NNP denotes TSST-1
T24560 302-303 NNP denotes +
T24559 299-301 NNP denotes GP
T24558 297-298 , denotes ,
T24557 295-297 NNP denotes GP
T24556 293-294 , denotes ,
T24555 287-293 NNP denotes TSST-1
T24554 285-286 , denotes ,
T24553 282-285 NNP denotes LPS
T24552 280-281 , denotes ,
T24551 273-280 NN denotes control
T24550 266-272 NN denotes medium
T24549 261-265 IN denotes with
T24548 251-260 VBN denotes incubated
T24547 246-250 VBD denotes were
T24546 241-245 NNP denotes PBMC
T24545 235-240 NNP denotes Human
T24544 233-234 . denotes .
T24543 232-233 -RRB- denotes )
T24542 228-232 CD denotes 0.05
T24541 226-227 FW denotes <
T24540 224-225 FW denotes p
T24539 222-223 SYM denotes =
T24538 220-221 SYM denotes *
T24537 219-220 -LRB- denotes (
T24536 212-218 NNP denotes TSST-1
T24535 208-211 CC denotes and
T24534 205-207 NNP denotes GP
T24533 200-204 DT denotes both
T24532 197-199 TO denotes to
T24531 195-196 , denotes ,
T24530 191-195 NN denotes case
T24529 184-190 JJ denotes latter
T24528 180-183 DT denotes the
T24527 177-179 IN denotes in
T24526 175-176 , denotes ,
T24525 172-175 CC denotes and
T24524 169-171 NNP denotes GP
T24523 166-168 TO denotes to
T24522 157-165 VBN denotes compared
T24521 152-156 WRB denotes when
T24520 150-151 , denotes ,
T24519 144-150 NNP denotes TSST-1
T24518 142-143 NNP denotes +
T24517 139-141 NNP denotes GP
T24516 135-138 CC denotes and
T24515 131-134 NNP denotes LPS
T24514 129-130 NNP denotes +
T24513 126-128 NNP denotes GP
T24512 122-125 IN denotes for
T24511 109-121 JJ denotes up-regulated
T24510 105-108 VBD denotes was
T24509 97-104 VBG denotes Binding
T24508 95-96 . denotes .
T24507 87-95 NN denotes promoter
T24506 80-86 NN denotes IL-1RA
T24505 76-79 DT denotes the
T24504 73-75 IN denotes in
T24503 68-72 NN denotes site
T24502 59-67 NNP denotes NFATP2/3
T24501 55-58 JJ denotes new
T24500 53-54 DT denotes a
T24499 50-52 TO denotes to
T24498 42-49 JJ denotes binding
T24497 38-41 NNP denotes DNA
T24496 23-37 JJ denotes TSST-1-induced
T24495 13-22 VBD denotes modulated
T24494 10-12 NNP denotes GP
T24675 782-783 . denotes .
T24674 781-782 -RRB- denotes )
T24673 775-781 NNP denotes TSST-1
T24672 773-774 NNP denotes +
T24671 770-772 NNP denotes GP
T24670 768-769 : denotes :
T24669 767-768 CD denotes 7
T24668 762-766 NN denotes lane
T24667 760-761 : denotes ;
T24666 757-760 NNP denotes LPS
T24665 755-756 NNP denotes +
T24664 752-754 NNP denotes GP
T24663 750-751 : denotes :
T24662 749-750 CD denotes 6
T24661 744-748 NN denotes lane
T24660 742-743 , denotes ,
T24659 736-742 NN denotes TSST-1
T24658 734-735 : denotes :
T24657 733-734 CD denotes 5
T24656 728-732 NN denotes lane
T24655 726-727 : denotes ;
T24654 723-726 NNP denotes LPS
T24653 721-722 : denotes :
T24652 720-721 CD denotes 4
T24651 715-719 NN denotes lane
T24650 713-714 : denotes ;
T24649 711-713 NNP denotes GP
T24648 709-710 : denotes :
T24647 708-709 CD denotes 3
T24646 703-707 NN denotes lane
T24645 701-702 : denotes ;
T24644 694-701 NN denotes control
T24643 687-693 NN denotes medium
T24642 685-686 : denotes :
T24641 684-685 CD denotes 2
T24640 679-683 NN denotes lane
T24639 677-678 : denotes ;
T24638 672-677 NN denotes water
T24637 670-671 : denotes :
T24636 669-670 CD denotes 1
T24635 664-668 NN denotes lane
T24634 663-664 -LRB- denotes (
T24633 657-662 NN denotes panel
T24632 651-656 JJR denotes lower
T24631 647-650 DT denotes the
T24630 644-646 IN denotes in
T24629 638-643 VBN denotes shown
T24628 635-637 VBZ denotes is
T24627 624-634 NN denotes experiment
T24626 609-623 NN denotes representative
T24625 607-608 DT denotes a
T24624 604-606 IN denotes of
T24623 590-603 NN denotes autoradiogram
T24622 587-589 DT denotes An
T24621 585-586 . denotes .
T24620 584-585 -RRB- denotes )
T24619 583-584 CD denotes 6
T24618 581-582 SYM denotes =
T24617 579-580 FW denotes n
T24616 578-579 -LRB- denotes (
T24615 574-577 NNP denotes SEM
T24614 572-573 CD denotes ±
T24613 570-571 CD denotes 1
T24612 567-569 TO denotes to
T24611 561-566 JJ denotes equal
T24610 557-560 VBN denotes set
T24609 552-556 VBD denotes were
T24608 545-551 NNS denotes levels
T24607 537-544 NN denotes control
T24606 530-536 NN denotes Medium
T24605 528-529 . denotes .
T24604 523-528 VBN denotes added
T24603 519-522 VBP denotes are
T24602 517-518 . denotes .
T24601 513-517 NN denotes calc
T24600 510-512 CD denotes -1
T24599 503-510 NNP denotes GP/TSST
T24598 499-502 CC denotes and
T24597 497-498 . denotes .
T24596 493-497 NN denotes calc
R16668 T24494 T24495 nsubj GP,modulated
R16669 T24495 T24495 ROOT modulated,modulated
R16670 T24496 T24497 compound TSST-1-induced,DNA
R16671 T24497 T24495 dobj DNA,modulated
R16672 T24498 T24495 advcl binding,modulated
R16673 T24499 T24498 prep to,binding
R16674 T24500 T24503 det a,site
R16675 T24501 T24503 amod new,site
R16676 T24502 T24503 compound NFATP2/3,site
R16677 T24503 T24499 pobj site,to
R16678 T24504 T24503 prep in,site
R16679 T24505 T24507 det the,promoter
R16680 T24506 T24507 compound IL-1RA,promoter
R16681 T24507 T24504 pobj promoter,in
R16682 T24508 T24495 punct .,modulated
R16683 T24509 T24510 nsubj Binding,was
R16684 T24510 T24510 ROOT was,was
R16685 T24511 T24510 acomp up-regulated,was
R16686 T24512 T24511 prep for,up-regulated
R16687 T24513 T24515 compound GP,LPS
R16688 T24514 T24515 compound +,LPS
R16689 T24515 T24512 pobj LPS,for
R16690 T24516 T24515 cc and,LPS
R16691 T24517 T24519 compound GP,TSST-1
R16692 T24518 T24519 compound +,TSST-1
R16693 T24519 T24515 conj TSST-1,LPS
R16694 T24520 T24510 punct ",",was
R16695 T24521 T24522 advmod when,compared
R16696 T24522 T24510 advcl compared,was
R16697 T24523 T24522 prep to,compared
R16698 T24524 T24523 pobj GP,to
R16699 T24525 T24524 cc and,GP
R16700 T24526 T24524 punct ",",GP
R16701 T24527 T24524 prep in,GP
R16702 T24528 T24530 det the,case
R16703 T24529 T24530 amod latter,case
R16704 T24530 T24527 pobj case,in
R16705 T24531 T24510 punct ",",was
R16706 T24532 T24540 prep to,p
R16707 T24533 T24534 preconj both,GP
R16708 T24534 T24532 pobj GP,to
R16709 T24535 T24534 cc and,GP
R16710 T24536 T24534 conj TSST-1,GP
R16711 T24537 T24540 punct (,p
R16712 T24538 T24540 punct *,p
R16713 T24539 T24540 punct =,p
R16714 T24540 T24510 advcl p,was
R16715 T24541 T24542 nmod <,0.05
R16716 T24542 T24540 npadvmod 0.05,p
R16717 T24543 T24540 punct ),p
R16718 T24544 T24510 punct .,was
R16719 T24545 T24546 compound Human,PBMC
R16720 T24546 T24548 nsubjpass PBMC,incubated
R16721 T24547 T24548 auxpass were,incubated
R16722 T24548 T24548 ROOT incubated,incubated
R16723 T24549 T24548 prep with,incubated
R16724 T24550 T24551 compound medium,control
R16725 T24551 T24549 pobj control,with
R16726 T24552 T24551 punct ",",control
R16727 T24553 T24551 conj LPS,control
R16728 T24554 T24553 punct ",",LPS
R16729 T24555 T24553 conj TSST-1,LPS
R16730 T24556 T24555 punct ",",TSST-1
R16731 T24557 T24555 conj GP,TSST-1
R16732 T24558 T24557 punct ",",GP
R16733 T24559 T24561 compound GP,TSST-1
R16734 T24560 T24561 compound +,TSST-1
R16735 T24561 T24557 conj TSST-1,GP
R16736 T24562 T24561 cc and,TSST-1
R16737 T24563 T24565 compound GP,LPS
R16738 T24564 T24565 compound +,LPS
R16739 T24565 T24561 conj LPS,TSST-1
R16740 T24566 T24548 prep for,incubated
R16741 T24567 T24568 nummod 1,h
R16742 T24568 T24566 pobj h,for
R16743 T24569 T24568 prep at,h
R16744 T24570 T24571 nummod 37,°
R16745 T24571 T24574 nummod °,representation
R16746 T24572 T24573 compound C.,Schematic
R16747 T24573 T24574 compound Schematic,representation
R16748 T24574 T24569 pobj representation,at
R16749 T24575 T24574 prep of,representation
R16750 T24576 T24580 det the,activity
R16751 T24577 T24580 amod elevated,activity
R16752 T24578 T24580 nmod NFAT-DNA,activity
R16753 T24579 T24580 amod binding,activity
R16754 T24580 T24575 pobj activity,of
R16755 T24581 T24580 prep to,activity
R16756 T24582 T24583 det the,site
R16757 T24583 T24581 pobj site,to
R16758 T24584 T24583 prep in,site
R16759 T24585 T24587 det the,promoter
R16760 T24586 T24587 compound IL-1RA,promoter
R16761 T24587 T24584 pobj promoter,in
R16762 T24588 T24548 punct .,incubated
R16763 T24589 T24589 ROOT Bars,Bars
R16764 T24590 T24589 acl depicting,Bars
R16765 T24591 T24593 det the,values
R16766 T24592 T24593 amod theoretical,values
R16767 T24593 T24590 dobj values,depicting
R16768 T24594 T24593 prep for,values
R16769 T24595 T24596 compound GP/LPS,calc
R16770 T24596 T24594 pobj calc,for
R16771 T24597 T24590 punct .,depicting
R16772 T24598 T24601 cc and,calc
R16773 T24599 T24601 nmod GP/TSST,calc
R16774 T24600 T24601 nummod -1,calc
R16775 T24601 T24601 ROOT calc,calc
R16776 T24602 T24601 punct .,calc
R16777 T24603 T24604 auxpass are,added
R16778 T24604 T24604 ROOT added,added
R16779 T24605 T24604 punct .,added
R16780 T24606 T24608 compound Medium,levels
R16781 T24607 T24608 compound control,levels
R16782 T24608 T24610 nsubjpass levels,set
R16783 T24609 T24610 auxpass were,set
R16784 T24610 T24610 ROOT set,set
R16785 T24611 T24610 oprd equal,set
R16786 T24612 T24610 prep to,set
R16787 T24613 T24615 nummod 1,SEM
R16788 T24614 T24615 nummod ±,SEM
R16789 T24615 T24612 pobj SEM,to
R16790 T24616 T24619 punct (,6
R16791 T24617 T24619 advmod n,6
R16792 T24618 T24619 punct =,6
R16793 T24619 T24615 appos 6,SEM
R16794 T24620 T24610 punct ),set
R16795 T24621 T24610 punct .,set
R16796 T24622 T24623 det An,autoradiogram
R16797 T24623 T24629 nsubjpass autoradiogram,shown
R16798 T24624 T24623 prep of,autoradiogram
R16799 T24625 T24627 det a,experiment
R16800 T24626 T24627 compound representative,experiment
R16801 T24627 T24624 pobj experiment,of
R16802 T24628 T24629 auxpass is,shown
R16803 T24629 T24651 ccomp shown,lane
R16804 T24630 T24629 prep in,shown
R16805 T24631 T24633 det the,panel
R16806 T24632 T24633 amod lower,panel
R16807 T24633 T24630 pobj panel,in
R16808 T24634 T24633 punct (,panel
R16809 T24635 T24633 appos lane,panel
R16810 T24636 T24635 nummod 1,lane
R16811 T24637 T24633 punct :,panel
R16812 T24638 T24633 appos water,panel
R16813 T24639 T24651 punct ;,lane
R16814 T24640 T24651 compound lane,lane
R16815 T24641 T24640 nummod 2,lane
R16816 T24642 T24640 punct :,lane
R16817 T24643 T24644 compound medium,control
R16818 T24644 T24640 appos control,lane
R16819 T24645 T24640 punct ;,lane
R16820 T24646 T24640 appos lane,lane
R16821 T24647 T24646 nummod 3,lane
R16822 T24648 T24646 punct :,lane
R16823 T24649 T24646 appos GP,lane
R16824 T24650 T24640 punct ;,lane
R16825 T24651 T24651 ROOT lane,lane
R16826 T24652 T24651 nummod 4,lane
R16827 T24653 T24651 punct :,lane
R16828 T24654 T24651 appos LPS,lane
R16829 T24655 T24651 punct ;,lane
R16830 T24656 T24651 appos lane,lane
R16831 T24657 T24656 nummod 5,lane
R16832 T24658 T24656 punct :,lane
R16833 T24659 T24656 appos TSST-1,lane
R16834 T24660 T24659 punct ",",TSST-1
R16835 T24661 T24651 appos lane,lane
R16836 T24662 T24661 nummod 6,lane
R16837 T24663 T24661 punct :,lane
R16838 T24664 T24666 compound GP,LPS
R16839 T24665 T24666 compound +,LPS
R16840 T24666 T24661 appos LPS,lane
R16841 T24667 T24661 punct ;,lane
R16842 T24668 T24651 appos lane,lane
R16843 T24669 T24668 nummod 7,lane
R16844 T24670 T24651 punct :,lane
R16845 T24671 T24673 compound GP,TSST-1
R16846 T24672 T24673 compound +,TSST-1
R16847 T24673 T24651 appos TSST-1,lane
R16848 T24674 T24651 punct ),lane
R16849 T24675 T24651 punct .,lane

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T24243 373-381 Positive_regulation denotes elevated
T24242 391-398 Binding denotes binding
T24241 427-442 Protein denotes IL-1RA promoter
T24240 382-390 Protein denotes NFAT-DNA
T24239 80-95 Protein denotes IL-1RA promoter
R16474 T24240 T24242 themeOf NFAT-DNA,binding
R16475 T24242 T24243 themeOf binding,elevated

testone

Id Subject Object Predicate Lexical cue
T24169 391-398 Binding denotes binding
T24168 373-381 Positive_regulation denotes elevated
T24167 109-121 Positive_regulation denotes up-regulated
T24166 97-104 Binding denotes Binding
T24165 42-49 Binding denotes binding
T24164 30-37 Positive_regulation denotes induced
T24163 13-22 Regulation denotes modulated
T24162 775-781 Protein denotes TSST-1
T24161 736-742 Protein denotes TSST-1
T24160 506-512 Protein denotes TSST-1
T24159 427-433 Protein denotes IL-1RA
T24158 382-386 Protein denotes NFAT
T24157 304-310 Protein denotes TSST-1
T24156 287-293 Protein denotes TSST-1
T24155 212-218 Protein denotes TSST-1
T24154 144-150 Protein denotes TSST-1
T24153 80-86 Protein denotes IL-1RA
T24152 23-29 Protein denotes TSST-1
R16446 T24152 T24164 causeOf TSST-1,induced
R16447 T24154 T24167 themeOf TSST-1,up-regulated
R16448 T24155 T24167 themeOf TSST-1,up-regulated
R16449 T24158 T24169 themeOf NFAT,binding
R16450 T24164 T24163 themeOf induced,modulated
R16451 T24165 T24163 themeOf binding,modulated
R16452 T24165 T24164 themeOf binding,induced
R16453 T24166 T24167 causeOf Binding,up-regulated
R16454 T24166 T24167 themeOf Binding,up-regulated
R16455 T24169 T24168 themeOf binding,elevated

test3

Id Subject Object Predicate Lexical cue
T24195 775-781 Protein denotes TSST-1
T24194 736-742 Protein denotes TSST-1
T24193 506-512 Protein denotes TSST-1
T24192 427-433 Protein denotes IL-1RA
T24191 391-398 Binding denotes binding
T24190 382-386 Protein denotes NFAT
T24189 304-310 Protein denotes TSST-1
T24188 287-293 Protein denotes TSST-1
T24187 212-218 Protein denotes TSST-1
T24186 144-150 Protein denotes TSST-1
T24185 109-111 Positive_regulation denotes up
T24184 97-104 Binding denotes Binding
T24183 80-86 Protein denotes IL-1RA
T24182 42-49 Binding denotes binding
T24181 23-29 Protein denotes TSST-1
T24180 775-781 Protein denotes TSST-1
T24179 736-742 Protein denotes TSST-1
T24178 506-512 Protein denotes TSST-1
T24177 427-433 Protein denotes IL-1RA
T24176 382-386 Protein denotes NFAT
T24175 304-310 Protein denotes TSST-1
T24174 287-293 Protein denotes TSST-1
T24173 212-218 Protein denotes TSST-1
T24172 144-150 Protein denotes TSST-1
T24171 80-86 Protein denotes IL-1RA
T24170 23-29 Protein denotes TSST-1
R16456 T24181 T24182 themeOf TSST-1,binding
R16457 T24186 T24184 themeOf TSST-1,Binding
R16458 T24187 T24184 themeOf TSST-1,Binding
R16459 T24190 T24191 themeOf NFAT,binding