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PMC:1359074 / 3023-3223 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-15721738-85760951 42-43 15721738 denotes 1
16462943-1425584-85760952 184-185 1425584 denotes 2
16462943-8078769-85760953 186-187 8078769 denotes 3
T25472 42-43 15721738 denotes 1
T92399 184-185 1425584 denotes 2
T83652 186-187 8078769 denotes 3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1767 196-200 JJ denotes most
T1766 190-195 IN denotes while
T1765 188-189 -COMMA- denotes ,
T1764 187-188 -RRB- denotes ]
T1763 184-187 CD denotes 2,3
T1762 183-184 -LRB- denotes [
T1761 175-182 NN denotes changes
T1760 160-174 JJ denotes conformational
T1759 154-159 JJ denotes local
T1758 151-153 TO denotes to
T1757 145-150 VB denotes leads
T1756 140-144 WDT denotes that
T1755 136-139 NN denotes DNA
T1754 132-135 DT denotes the
T1753 129-131 IN denotes of
T1752 124-128 NN denotes bend
T1751 116-123 JJ denotes 70°–85°
T1750 114-115 DT denotes a
T1749 108-113 VB denotes cause
T1748 104-107 CC denotes and
T1747 100-103 NN denotes DNA
T1746 97-99 IN denotes of
T1745 90-96 NN denotes groove
T1744 84-89 JJ denotes minor
T1743 80-83 DT denotes the
T1742 77-79 TO denotes to
T1741 72-76 VB denotes bind
T1740 64-71 NN denotes factors
T1739 50-63 NN denotes transcription
T1738 46-49 NN denotes Sox
T1737 43-44 -RRB- denotes ]
T1736 42-43 CD denotes 1
T1735 41-42 -LRB- denotes [
T1734 33-40 NN denotes binding
T1733 29-32 CC denotes and
T1732 17-28 NN denotes recognition
T1731 13-16 NN denotes DNA
T1730 10-12 IN denotes in
T1729 1-9 VB denotes involved
R836 T1729 T1730 arg1Of involved,in
R837 T1729 T1735 arg1Of involved,[
R838 T1732 T1733 arg1Of recognition,and
R839 T1733 T1730 arg2Of and,in
R840 T1733 T1731 arg1Of and,DNA
R841 T1734 T1733 arg2Of binding,and
R842 T1736 T1735 arg2Of 1,[
R843 T1737 T1735 arg3Of ],[
R844 T1740 T1738 arg1Of factors,Sox
R845 T1740 T1739 arg1Of factors,transcription
R846 T1740 T1741 arg1Of factors,bind
R847 T1740 T1749 arg1Of factors,cause
R848 T1741 T1742 arg1Of bind,to
R849 T1741 T1748 arg1Of bind,and
R850 T1745 T1742 arg2Of groove,to
R851 T1745 T1743 arg1Of groove,the
R852 T1745 T1744 arg1Of groove,minor
R853 T1745 T1746 arg1Of groove,of
R854 T1747 T1746 arg2Of DNA,of
R855 T1749 T1748 arg2Of cause,and
R856 T1752 T1749 arg2Of bend,cause
R857 T1752 T1750 arg1Of bend,a
R858 T1752 T1751 arg1Of bend,70°–85°
R859 T1752 T1753 arg1Of bend,of
R860 T1755 T1753 arg2Of DNA,of
R861 T1755 T1754 arg1Of DNA,the
R862 T1755 T1756 arg1Of DNA,that
R863 T1755 T1757 arg1Of DNA,leads
R864 T1757 T1758 arg1Of leads,to
R865 T1757 T1765 arg1Of leads,","
R866 T1757 T1766 arg1Of leads,while
R867 T1761 T1758 arg2Of changes,to
R868 T1761 T1759 arg1Of changes,local
R869 T1761 T1760 arg1Of changes,conformational
R870 T1761 T1762 arg1Of changes,[
R871 T1763 T1762 arg2Of "2,3",[
R872 T1764 T1762 arg3Of ],[

GO-BP

Id Subject Object Predicate Lexical cue
T1236 50-63 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T1469 33-40 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T1486 90-96 http://purl.obolibrary.org/obo/GO_0097610 denotes groove

DLUT931

Id Subject Object Predicate Lexical cue
T2816 33-40 Binding denotes binding

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4103 100-103 Entity denotes DNA
T4098 13-16 Entity denotes DNA
T4060 46-49 Protein denotes Sox
T4209 46-103 Binding denotes Sox transcription factors bind to the minor groove of DNA
T4184 77-103 Entity denotes to the minor groove of DNA
T4144 46-71 Protein denotes Sox transcription factors
T4172 129-139 Entity denotes of the DNA
R3015 T4144 T4209 themeOf Sox transcription factors,Sox transcription factors bind to the minor groove of DNA
R3024 T4184 T4209 themeOf to the minor groove of DNA,Sox transcription factors bind to the minor groove of DNA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2967 108-113 VB denotes cause
T2966 104-107 CC denotes and
T2965 100-103 NNP denotes DNA
T2964 97-99 IN denotes of
T2963 90-96 NN denotes groove
T2962 84-89 JJ denotes minor
T2961 80-83 DT denotes the
T2960 77-79 TO denotes to
T2959 72-76 NN denotes bind
T2958 64-71 NNS denotes factors
T2957 50-63 NN denotes transcription
T2956 46-49 NNP denotes Sox
T2955 44-45 . denotes .
T2954 43-44 NNP denotes ]
T2953 42-43 CD denotes 1
T2952 41-42 NN denotes [
T2951 33-40 JJ denotes binding
T2950 29-32 CC denotes and
T2949 17-28 NN denotes recognition
T2948 13-16 NNP denotes DNA
T2947 10-12 IN denotes in
T2946 1-9 VBN denotes involved
T2988 196-200 RBS denotes most
T2987 190-195 IN denotes while
T2986 188-189 , denotes ,
T2985 187-188 NNP denotes ]
T2984 184-187 CD denotes 2,3
T2983 183-184 NNP denotes [
T2982 175-182 NNS denotes changes
T2981 160-174 JJ denotes conformational
T2980 154-159 JJ denotes local
T2979 151-153 TO denotes to
T2978 145-150 VBZ denotes leads
T2977 140-144 WDT denotes that
T2976 136-139 NN denotes DNA
T2975 132-135 DT denotes the
T2974 129-131 IN denotes of
T2973 124-128 VB denotes bend
T2972 122-123 NN denotes °
T2971 120-122 CD denotes 85
T2970 118-119 NN denotes °
T2969 116-118 CD denotes 70
T2968 114-115 DT denotes a
R1956 T2947 T2946 prep in,involved
R1957 T2948 T2949 compound DNA,recognition
R1958 T2949 T2947 pobj recognition,in
R1960 T2950 T2949 cc and,recognition
R1961 T2951 T2952 amod binding,[
R1962 T2952 T2949 conj [,recognition
R1963 T2953 T2954 nummod 1,]
R1965 T2954 T2952 appos ],[
R1968 T2956 T2959 nsubj Sox,bind
R1969 T2957 T2958 compound transcription,factors
R1970 T2958 T2959 nsubj factors,bind
R1972 T2959 T2959 ROOT bind,bind
R1973 T2960 T2959 prep to,bind
R1975 T2961 T2963 det the,groove
R1976 T2962 T2963 amod minor,groove
R1978 T2963 T2960 pobj groove,to
R1979 T2964 T2963 prep of,groove
R1980 T2965 T2964 pobj DNA,of
R1981 T2966 T2959 cc and,bind
R1982 T2967 T2959 conj cause,bind
R1983 T2968 T2970 det a,°
R1985 T2969 T2970 nummod 70,°
R1986 T2970 T2967 dobj °,cause
R1987 T2971 T2973 nummod 85,bend
R1989 T2972 T2973 compound °,bend
R1990 T2973 T2970 appos bend,°
R1991 T2974 T2973 prep of,bend
R1993 T2975 T2976 det the,DNA
R1994 T2976 T2974 pobj DNA,of
R1995 T2977 T2978 nsubj that,leads
R1997 T2978 T2976 relcl leads,DNA
R1998 T2979 T2978 prep to,leads
R1999 T2980 T2982 amod local,changes
R2000 T2981 T2982 amod conformational,changes
R2002 T2982 T2979 pobj changes,to
R2003 T2983 T2985 compound [,]
R2005 T2984 T2985 compound "2,3",]
R2006 T2985 T2982 appos ],changes
R2007 T2986 T2973 punct ",",bend

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1507 72-76 Binding denotes bind
T1506 46-49 Protein denotes Sox
R758 T1506 T1507 themeOf Sox,bind

testone

Id Subject Object Predicate Lexical cue
T1033 72-76 Binding denotes bind
T1032 33-40 Binding denotes binding

test3

Id Subject Object Predicate Lexical cue
T1122 72-76 Binding denotes bind