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PMC:1359074 / 29223-29343 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12493 109-119 NN denotes expression
T12492 102-108 NN denotes globin
T12491 99-101 JJ denotes ɛy
T12490 91-98 NN denotes silence
T12489 88-90 TO denotes to
T12488 73-87 NN denotes erythropoiesis
T12487 62-72 JJ denotes definitive
T12486 59-61 IN denotes in
T12485 49-58 NN denotes functions
T12484 44-48 NN denotes Sox6
T12483 39-43 IN denotes that
T12482 27-38 VB denotes demonstrate
T12481 22-26 NN denotes data
T12480 16-21 DT denotes these
T12479 14-15 -COMMA- denotes ,
T12478 6-14 RB denotes together
T12477 0-5 VB denotes Taken
R8360 T12477 T12478 arg1Of Taken,together
R8361 T12481 T12480 arg1Of data,these
R8362 T12481 T12482 arg1Of data,demonstrate
R8363 T12482 T12477 modOf demonstrate,Taken
R8364 T12482 T12479 arg1Of demonstrate,","
R8365 T12485 T12482 arg2Of functions,demonstrate
R8366 T12485 T12483 arg1Of functions,that
R8367 T12485 T12484 arg1Of functions,Sox6
R8368 T12485 T12486 arg1Of functions,in
R8369 T12488 T12486 arg2Of erythropoiesis,in
R8370 T12488 T12487 arg1Of erythropoiesis,definitive
R8371 T12488 T12489 arg1Of erythropoiesis,to
R8372 T12493 T12489 arg2Of expression,to
R8373 T12493 T12490 arg1Of expression,silence
R8374 T12493 T12491 arg1Of expression,ɛy
R8375 T12493 T12492 arg1Of expression,globin

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11509 99-108 Protein denotes ɛy globin
T11508 44-48 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13269 44-48 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-BP

Id Subject Object Predicate Lexical cue
T11235 73-87 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T11231 62-87 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis
T11212 102-108 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T11562 102-108 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T11173 0-120 Sentence denotes Taken together, these data demonstrate that Sox6 functions in definitive erythropoiesis to silence ɛy globin expression.
T222 0-120 Sentence denotes Taken together, these data demonstrate that Sox6 functions in definitive erythropoiesis to silence ɛy globin expression.

simple1

Id Subject Object Predicate Lexical cue
T11773 99-108 Protein denotes ɛy globin
T11772 44-48 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15810 109-119 Gene_expression denotes expression
T15809 91-98 Negative_regulation denotes silence
T15744 99-108 Protein denotes ɛy globin
T15743 44-48 Protein denotes Sox6
R11048 T15744 T15810 themeOf ɛy globin,expression
R11057 T15810 T15809 themeOf expression,silence

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13401 109-119 Gene_expression denotes expression
T13400 91-98 Negative_regulation denotes silence
T13334 99-108 Protein denotes ɛy globin
T13333 44-48 Protein denotes Sox6
R9172 T13333 T13400 causeOf Sox6,silence
R9173 T13334 T13401 themeOf ɛy globin,expression
R9229 T13401 T13400 themeOf expression,silence

DLUT931

Id Subject Object Predicate Lexical cue
T13655 91-98 Negative_regulation denotes silence
T13654 109-119 Gene_expression denotes expression
T13580 99-108 Protein denotes ɛy globin
T13579 44-48 Protein denotes Sox6
R9326 T13579 T13655 causeOf Sox6,silence
R9327 T13580 T13654 themeOf ɛy globin,expression
R9334 T13654 T13655 themeOf expression,silence

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15552 91-119 Protein denotes silence ɛy globin expression
T15546 102-108 Protein denotes globin
T15468 44-48 Protein denotes Sox6

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14499 59-61 IN denotes in
T14498 49-58 NNS denotes functions
T14497 44-48 JJ denotes Sox6
T14496 39-43 IN denotes that
T14495 27-38 VBP denotes demonstrate
T14494 22-26 NNS denotes data
T14493 16-21 DT denotes these
T14492 14-15 , denotes ,
T14491 6-14 RB denotes together
T14490 0-5 VBN denotes Taken
T14507 119-120 . denotes .
T14506 109-119 NN denotes expression
T14505 102-108 NN denotes globin
T14504 99-101 NN denotes ɛy
T14503 91-98 NN denotes silence
T14502 88-90 TO denotes to
T14501 73-87 NNS denotes erythropoiesis
T14500 62-72 JJ denotes definitive
R10039 T14490 T14495 advcl Taken,demonstrate
R10041 T14491 T14490 advmod together,Taken
R10042 T14492 T14495 punct ",",demonstrate
R10043 T14493 T14494 det these,data
R10045 T14494 T14495 nsubj data,demonstrate
R10046 T14495 T14495 ROOT demonstrate,demonstrate
R10048 T14496 T14506 det that,expression
R10049 T14497 T14498 amod Sox6,functions
R10050 T14498 T14503 nsubj functions,silence
R10052 T14499 T14498 prep in,functions
R10053 T14500 T14501 amod definitive,erythropoiesis
R10054 T14501 T14499 pobj erythropoiesis,in
R10055 T14502 T14503 aux to,silence
R10057 T14503 T14506 nmod silence,expression
R10058 T14504 T14506 nmod ɛy,expression
R10059 T14505 T14506 compound globin,expression
R10061 T14506 T14495 dobj expression,demonstrate
R10062 T14507 T14495 punct .,demonstrate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13468 91-98 Negative_regulation denotes silence
T13467 109-119 Gene_expression denotes expression
T13466 102-108 Protein denotes globin
T13465 44-48 Protein denotes Sox6
R9237 T13465 T13468 causeOf Sox6,silence
R9238 T13466 T13467 themeOf globin,expression
R9239 T13467 T13468 themeOf expression,silence

testone

Id Subject Object Predicate Lexical cue
T10826 99-108 Protein denotes ɛy globin
T10825 44-48 Protein denotes Sox6
T10904 109-119 Gene_expression denotes expression
T10903 91-98 Negative_regulation denotes silence
R7460 T10825 T10903 causeOf Sox6,silence
R7461 T10826 T10904 themeOf ɛy globin,expression
R7488 T10904 T10903 themeOf expression,silence

test3

Id Subject Object Predicate Lexical cue
T11090 109-119 Gene_expression denotes expression
T11089 99-108 Protein denotes ɛy globin
T11088 44-48 Protein denotes Sox6
T10971 99-108 Protein denotes ɛy globin
T10970 44-48 Protein denotes Sox6
R7523 T11089 T11090 themeOf ɛy globin,expression
R7524 T11090 T11088 themeOf expression,Sox6