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PMC:1208879 / 21152-21774 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5873 621-622 . denotes .
T5872 606-608 VB denotes be
T5871 609-621 VBN denotes investigated
T5870 603-605 TO denotes to
T5869 593-595 , denotes ,
T5868 590-593 NN denotes PSD
T5867 586-589 DT denotes the
T5866 581-585 IN denotes with
T5865 569-580 NN denotes association
T5864 566-568 DT denotes an
T5863 563-565 IN denotes of
T5862 551-562 NN denotes possibility
T5861 547-550 DT denotes the
T5860 543-546 CC denotes and
T5859 541-543 , denotes ,
T5858 533-541 NNS denotes neurones
T5857 530-532 IN denotes in
T5856 505-516 JJ denotes subcellular
T5855 517-529 NN denotes localisation
T5854 501-504 PRP$ denotes its
T5853 493-500 RB denotes however
T5852 491-492 : denotes ;
T5851 490-491 -RRB- denotes ]
T5850 488-490 CD denotes 49
T5849 487-488 -LRB- denotes [
T5848 481-486 NN denotes brain
T5847 478-480 IN denotes in
T5846 469-477 JJ denotes abundant
T5845 458-468 RB denotes relatively
T5844 455-457 VBZ denotes is
T5843 441-442 HYPH denotes -
T5842 442-446 JJ denotes less
T5841 435-441 VBN denotes paired
T5840 447-454 NN denotes isoform
T5839 431-434 DT denotes the
T5838 426-430 NNS denotes mice
T5837 595-602 VBZ denotes remains
T5836 423-425 IN denotes In
T5835 422-622 sentence denotes In mice the paired-less isoform is relatively abundant in brain [49]; however its subcellular localisation in neurones, and the possibility of an association with the PSD, remains to be investigated.
T5834 421-422 . denotes .
T5833 420-421 -RRB- denotes ]
T5832 418-420 CD denotes 51
T5831 417-418 SYM denotes -
T5830 415-417 CD denotes 49
T5829 414-415 -LRB- denotes [
T5828 408-413 RB denotes alone
T5827 396-407 NN denotes homeodomain
T5826 392-395 DT denotes the
T5825 384-391 IN denotes through
T5824 380-383 NN denotes DNA
T5823 374-379 VBZ denotes binds
T5822 370-373 CC denotes and
T5821 368-370 , denotes ,
T5820 357-368 JJ denotes cytoplasmic
T5819 353-356 CC denotes and
T5818 345-352 JJ denotes nuclear
T5817 340-344 CC denotes both
T5816 337-339 VBZ denotes is
T5815 335-337 , denotes ,
T5814 322-328 JJ denotes paired
T5813 329-335 NN denotes domain
T5812 318-321 DT denotes the
T5811 312-317 VBZ denotes lacks
T5810 307-311 WDT denotes that
T5809 299-306 NN denotes isoform
T5808 296-298 DT denotes an
T5807 292-295 IN denotes for
T5806 283-291 NN denotes nematode
T5805 279-282 CC denotes and
T5804 273-278 NN denotes quail
T5803 271-273 , denotes ,
T5802 266-271 NN denotes mouse
T5801 263-265 IN denotes in
T5800 254-262 NN denotes evidence
T5799 249-253 JJ denotes good
T5798 240-245 EX denotes there
T5797 238-240 , denotes ,
T5796 231-238 JJ denotes nuclear
T5795 217-230 RB denotes predominantly
T5794 246-248 VBZ denotes is
T5793 201-205 NN denotes PAX6
T5792 193-194 HYPH denotes -
T5791 194-200 NN denotes length
T5790 189-193 JJ denotes full
T5789 206-213 NN denotes protein
T5788 185-188 DT denotes the
T5787 214-216 VBZ denotes is
T5786 176-184 IN denotes Although
T5785 175-422 sentence denotes Although the full-length PAX6 protein is predominantly nuclear, there is good evidence in mouse, quail and nematode for an isoform that lacks the paired domain, is both nuclear and cytoplasmic, and binds DNA through the homeodomain alone [49-51].
T5784 174-175 . denotes .
T5783 173-174 -RRB- denotes ]
T5782 170-171 , denotes ,
T5781 168-170 CD denotes 47
T5780 171-173 CD denotes 48
T5779 167-168 -LRB- denotes [
T5778 159-166 NN denotes nucleus
T5777 155-158 DT denotes the
T5776 151-154 CC denotes and
T5775 143-150 NN denotes synapse
T5774 139-142 DT denotes the
T5773 131-138 IN denotes between
T5772 120-130 NNS denotes messengers
T5771 117-119 IN denotes as
T5770 113-116 VBP denotes act
T5769 107-112 WDT denotes which
T5768 105-107 , denotes ,
T5767 101-105 NN denotes CREB
T5766 97-100 CC denotes and
T5765 91-96 NN denotes STAT3
T5764 61-74 JJ denotes post-synaptic
T5763 75-82 NN denotes density
T5762 57-60 DT denotes the
T5761 52-56 IN denotes with
T5760 44-51 NNS denotes factors
T5759 30-43 NN denotes transcription
T5758 27-29 IN denotes of
T5757 15-26 NN denotes association
T5756 11-14 IN denotes for
T5755 83-90 VBP denotes include
T5754 0-10 NNS denotes Precedents
R3414 T5754 T5755 nsubj Precedents,include
R3415 T5756 T5754 prep for,Precedents
R3416 T5757 T5756 pobj association,for
R3417 T5758 T5757 prep of,association
R3418 T5759 T5760 compound transcription,factors
R3419 T5760 T5758 pobj factors,of
R3420 T5761 T5757 prep with,association
R3421 T5762 T5763 det the,density
R3422 T5763 T5761 pobj density,with
R3423 T5764 T5763 amod post-synaptic,density
R3424 T5765 T5755 dobj STAT3,include
R3425 T5766 T5765 cc and,STAT3
R3426 T5767 T5765 conj CREB,STAT3
R3427 T5768 T5765 punct ", ",STAT3
R3428 T5769 T5770 dep which,act
R3429 T5770 T5765 relcl act,STAT3
R3430 T5771 T5770 prep as,act
R3431 T5772 T5771 pobj messengers,as
R3432 T5773 T5772 prep between,messengers
R3433 T5774 T5775 det the,synapse
R3434 T5775 T5773 pobj synapse,between
R3435 T5776 T5775 cc and,synapse
R3436 T5777 T5778 det the,nucleus
R3437 T5778 T5775 conj nucleus,synapse
R3438 T5779 T5780 punct [,48
R3439 T5780 T5755 parataxis 48,include
R3440 T5781 T5780 nummod 47,48
R3441 T5782 T5780 punct ",",48
R3442 T5783 T5780 punct ],48
R3443 T5784 T5755 punct .,include
R3444 T5786 T5787 mark Although,is
R3445 T5787 T5794 advcl is,is
R3446 T5788 T5789 det the,protein
R3447 T5789 T5787 nsubj protein,is
R3448 T5790 T5791 amod full,length
R3449 T5791 T5789 compound length,protein
R3450 T5792 T5791 punct -,length
R3451 T5793 T5789 compound PAX6,protein
R3452 T5795 T5796 advmod predominantly,nuclear
R3453 T5796 T5787 acomp nuclear,is
R3454 T5797 T5794 punct ", ",is
R3455 T5798 T5794 expl there,is
R3456 T5799 T5800 amod good,evidence
R3457 T5800 T5794 attr evidence,is
R3458 T5801 T5800 prep in,evidence
R3459 T5802 T5801 pobj mouse,in
R3460 T5803 T5802 punct ", ",mouse
R3461 T5804 T5802 conj quail,mouse
R3462 T5805 T5804 cc and,quail
R3463 T5806 T5804 conj nematode,quail
R3464 T5807 T5800 prep for,evidence
R3465 T5808 T5809 det an,isoform
R3466 T5809 T5807 pobj isoform,for
R3467 T5810 T5811 dep that,lacks
R3468 T5811 T5809 relcl lacks,isoform
R3469 T5812 T5813 det the,domain
R3470 T5813 T5811 dobj domain,lacks
R3471 T5814 T5813 amod paired,domain
R3472 T5815 T5811 punct ", ",lacks
R3473 T5816 T5811 conj is,lacks
R3474 T5817 T5818 preconj both,nuclear
R3475 T5818 T5816 acomp nuclear,is
R3476 T5819 T5818 cc and,nuclear
R3477 T5820 T5818 conj cytoplasmic,nuclear
R3478 T5821 T5816 punct ", ",is
R3479 T5822 T5816 cc and,is
R3480 T5823 T5816 conj binds,is
R3481 T5824 T5823 dobj DNA,binds
R3482 T5825 T5823 prep through,binds
R3483 T5826 T5827 det the,homeodomain
R3484 T5827 T5825 pobj homeodomain,through
R3485 T5828 T5827 advmod alone,homeodomain
R3486 T5829 T5830 punct [,49
R3487 T5830 T5794 parataxis 49,is
R3488 T5831 T5832 punct -,51
R3489 T5832 T5830 prep 51,49
R3490 T5833 T5830 punct ],49
R3491 T5834 T5794 punct .,is
R3492 T5836 T5837 prep In,remains
R3493 T5838 T5836 pobj mice,In
R3494 T5839 T5840 det the,isoform
R3495 T5840 T5844 nsubj isoform,is
R3496 T5841 T5842 advmod paired,less
R3497 T5842 T5840 amod less,isoform
R3498 T5843 T5842 punct -,less
R3499 T5844 T5837 ccomp is,remains
R3500 T5845 T5846 advmod relatively,abundant
R3501 T5846 T5844 acomp abundant,is
R3502 T5847 T5844 prep in,is
R3503 T5848 T5847 pobj brain,in
R3504 T5849 T5850 punct [,49
R3505 T5850 T5844 parataxis 49,is
R3506 T5851 T5850 punct ],49
R3507 T5852 T5837 punct ;,remains
R3508 T5853 T5837 advmod however,remains
R3509 T5854 T5855 poss its,localisation
R3510 T5855 T5837 nsubj localisation,remains
R3511 T5856 T5855 amod subcellular,localisation
R3512 T5857 T5855 prep in,localisation
R3513 T5858 T5857 pobj neurones,in
R3514 T5859 T5855 punct ", ",localisation
R3515 T5860 T5855 cc and,localisation
R3516 T5861 T5862 det the,possibility
R3517 T5862 T5855 conj possibility,localisation
R3518 T5863 T5862 prep of,possibility
R3519 T5864 T5865 det an,association
R3520 T5865 T5863 pobj association,of
R3521 T5866 T5865 prep with,association
R3522 T5867 T5868 det the,PSD
R3523 T5868 T5866 pobj PSD,with
R3524 T5869 T5837 punct ", ",remains
R3525 T5870 T5871 aux to,investigated
R3526 T5871 T5837 xcomp investigated,remains
R3527 T5872 T5871 auxpass be,investigated
R3528 T5873 T5837 punct .,remains

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4960 590-593 GO:0014069 denotes PSD
T4959 533-541 CL:0000540 denotes neurones
T4958 517-529 GO_PATO_EXT:biological_localization_process_or_quality denotes localisation
T4957 508-516 CL_GO_EXT:cell denotes cellular
T4956 505-516 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T4955 481-486 UBERON:0000955 denotes brain
T4954 447-454 SO_EXT:0001060 denotes isoform
T4953 426-430 NCBITaxon:10088 denotes mice
T4952 380-383 CHEBI_SO_EXT:DNA denotes DNA
T4951 374-379 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binds
T4950 357-368 GO:0005737 denotes cytoplasmic
T4949 345-352 GO:0005634 denotes nuclear
T4948 329-335 SO_EXT:0000417 denotes domain
T4947 299-306 SO_EXT:0001060 denotes isoform
T4946 283-291 NCBITaxon:6231 denotes nematode
T4945 273-278 NCBITaxon_EXT:quail denotes quail
T4944 266-271 NCBITaxon:10088 denotes mouse
T4943 231-238 GO:0005634 denotes nuclear
T4942 206-213 CHEBI_PR_EXT:protein denotes protein
T4941 201-205 PR_EXT:000012318 denotes PAX6
T4940 159-166 GO:0005634 denotes nucleus
T4939 143-150 GO:0045202 denotes synapse
T4938 120-130 CHEBI_EXT:33280 denotes messengers
T4937 101-105 PR_EXT:CREB denotes CREB
T4936 91-96 PR_EXT:000002089 denotes STAT3
T4935 61-82 GO:0014069 denotes post-synaptic density
T4934 30-51 GO_EXT:transcription_factor denotes transcription factors
T4933 30-43 GO_EXT:transcription denotes transcription

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4690 590-593 GO:0014069 denotes PSD
T4689 533-541 CL:0000540 denotes neurones
T4688 481-486 UBERON:0000955 denotes brain
T4687 447-454 SO:0001060 denotes isoform
T4686 426-430 NCBITaxon:10088 denotes mice
T4685 357-368 GO:0005737 denotes cytoplasmic
T4684 345-352 GO:0005634 denotes nuclear
T4683 329-335 SO:0000417 denotes domain
T4682 299-306 SO:0001060 denotes isoform
T4681 283-291 NCBITaxon:6231 denotes nematode
T4680 266-271 NCBITaxon:10088 denotes mouse
T4679 231-238 GO:0005634 denotes nuclear
T4678 201-205 PR:000012318 denotes PAX6
T4677 159-166 GO:0005634 denotes nucleus
T4676 143-150 GO:0045202 denotes synapse
T4675 120-130 CHEBI:33280 denotes messengers
T4674 91-96 PR:000002089 denotes STAT3
T4673 61-82 GO:0014069 denotes post-synaptic density