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PMC:1208879 / 16441-16691
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4133 | 249-250 | . | denotes | . |
T4132 | 230-242 | JJ | denotes | untranslated |
T4131 | 228-229 | SYM | denotes | ' |
T4130 | 227-228 | CD | denotes | 3 |
T4129 | 243-249 | NN | denotes | region |
T4128 | 223-226 | DT | denotes | the |
T4127 | 218-222 | IN | denotes | into |
T4126 | 206-211 | NN | denotes | amino |
T4125 | 203-205 | CD | denotes | 35 |
T4124 | 195-202 | JJ | denotes | further |
T4123 | 212-217 | NNS | denotes | acids |
T4122 | 193-194 | DT | denotes | a |
T4121 | 189-192 | IN | denotes | for |
T4120 | 181-188 | VBZ | denotes | extends |
T4119 | 176-180 | WDT | denotes | that |
T4118 | 156-157 | HYPH | denotes | - |
T4117 | 157-165 | JJ | denotes | terminal |
T4116 | 155-156 | NN | denotes | C |
T4115 | 166-175 | NN | denotes | extension |
T4114 | 153-154 | DT | denotes | a |
T4113 | 148-152 | IN | denotes | with |
T4112 | 135-139 | NN | denotes | PAX6 |
T4111 | 128-134 | NN | denotes | length |
T4110 | 123-127 | JJ | denotes | full |
T4109 | 140-147 | NN | denotes | protein |
T4108 | 121-122 | DT | denotes | a |
T4107 | 111-120 | VBZ | denotes | generates |
T4106 | 107-110 | CC | denotes | and |
T4105 | 105-106 | -RRB- | denotes | ) |
T4104 | 102-105 | NN | denotes | TTA |
T4103 | 101-102 | -LRB- | denotes | ( |
T4102 | 87-94 | NN | denotes | leucine |
T4101 | 95-100 | NN | denotes | codon |
T4100 | 85-86 | DT | denotes | a |
T4099 | 82-84 | IN | denotes | to |
T4098 | 80-81 | -RRB- | denotes | ) |
T4097 | 77-80 | NN | denotes | TAA |
T4096 | 76-77 | -LRB- | denotes | ( |
T4095 | 65-69 | NN | denotes | stop |
T4094 | 70-75 | NN | denotes | codon |
T4093 | 61-64 | DT | denotes | the |
T4092 | 48-52 | CD | denotes | 1629 |
T4091 | 39-47 | NN | denotes | position |
T4090 | 36-38 | IN | denotes | at |
T4089 | 23-24 | NN | denotes | T |
T4088 | 16-22 | JJ | denotes | single |
T4087 | 25-35 | NN | denotes | nucleotide |
T4086 | 14-15 | DT | denotes | a |
T4085 | 11-13 | IN | denotes | of |
T4084 | 53-60 | VBZ | denotes | changes |
T4083 | 1-10 | NN | denotes | Insertion |
T4082 | 0-250 | sentence | denotes | Insertion of a single T nucleotide at position 1629 changes the stop codon (TAA) to a leucine codon (TTA) and generates a full length PAX6 protein with a C-terminal extension that extends for a further 35 amino acids into the 3' untranslated region. |
R2554 | T4083 | T4084 | nsubj | Insertion,changes |
R2555 | T4085 | T4083 | prep | of,Insertion |
R2556 | T4086 | T4087 | det | a,nucleotide |
R2557 | T4087 | T4085 | pobj | nucleotide,of |
R2558 | T4088 | T4087 | amod | single,nucleotide |
R2559 | T4089 | T4087 | compound | T,nucleotide |
R2560 | T4090 | T4083 | prep | at,Insertion |
R2561 | T4091 | T4090 | pobj | position,at |
R2562 | T4092 | T4091 | nummod | 1629,position |
R2563 | T4093 | T4094 | det | the,codon |
R2564 | T4094 | T4084 | dobj | codon,changes |
R2565 | T4095 | T4094 | compound | stop,codon |
R2566 | T4096 | T4094 | punct | (,codon |
R2567 | T4097 | T4094 | appos | TAA,codon |
R2568 | T4098 | T4094 | punct | ),codon |
R2569 | T4099 | T4084 | prep | to,changes |
R2570 | T4100 | T4101 | det | a,codon |
R2571 | T4101 | T4099 | pobj | codon,to |
R2572 | T4102 | T4101 | compound | leucine,codon |
R2573 | T4103 | T4101 | punct | (,codon |
R2574 | T4104 | T4101 | appos | TTA,codon |
R2575 | T4105 | T4101 | punct | ),codon |
R2576 | T4106 | T4084 | cc | and,changes |
R2577 | T4107 | T4084 | conj | generates,changes |
R2578 | T4108 | T4109 | det | a,protein |
R2579 | T4109 | T4107 | dobj | protein,generates |
R2580 | T4110 | T4111 | amod | full,length |
R2581 | T4111 | T4109 | compound | length,protein |
R2582 | T4112 | T4109 | compound | PAX6,protein |
R2583 | T4113 | T4109 | prep | with,protein |
R2584 | T4114 | T4115 | det | a,extension |
R2585 | T4115 | T4113 | pobj | extension,with |
R2586 | T4116 | T4117 | npadvmod | C,terminal |
R2587 | T4117 | T4115 | amod | terminal,extension |
R2588 | T4118 | T4117 | punct | -,terminal |
R2589 | T4119 | T4120 | dep | that,extends |
R2590 | T4120 | T4115 | relcl | extends,extension |
R2591 | T4121 | T4120 | prep | for,extends |
R2592 | T4122 | T4123 | det | a,acids |
R2593 | T4123 | T4121 | pobj | acids,for |
R2594 | T4124 | T4123 | amod | further,acids |
R2595 | T4125 | T4123 | nummod | 35,acids |
R2596 | T4126 | T4123 | compound | amino,acids |
R2597 | T4127 | T4120 | prep | into,extends |
R2598 | T4128 | T4129 | det | the,region |
R2599 | T4129 | T4127 | pobj | region,into |
R2600 | T4130 | T4129 | nummod | 3,region |
R2601 | T4131 | T4130 | punct | ',3 |
R2602 | T4132 | T4129 | amod | untranslated,region |
R2603 | T4133 | T4084 | punct | .,changes |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3354 | 232-242 | GO:0006412 | denotes | translated |
T3353 | 227-249 | SO_EXT:0000205 | denotes | 3' untranslated region |
T3352 | 206-217 | CHEBI_SO_EXT:amino_acid | denotes | amino acids |
T3351 | 155-165 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
T3350 | 140-147 | CHEBI_PR_EXT:protein | denotes | protein |
T3349 | 135-139 | PR_EXT:000012318 | denotes | PAX6 |
T3348 | 95-100 | SO_EXT:0000360 | denotes | codon |
T3347 | 87-94 | CHEBI_SO_EXT:leucine | denotes | leucine |
T3346 | 65-75 | SO_EXT:0000319 | denotes | stop codon |
T3345 | 53-60 | SO_EXT:sequence_alteration_process | denotes | changes |
T3344 | 25-35 | CHEBI_SO_EXT:nucleotide | denotes | nucleotide |
T3343 | 23-35 | CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group | denotes | T nucleotide |
T3342 | 1-10 | SO_EXT:sequence_insertion_entity_or_process | denotes | Insertion |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3206 | 232-242 | GO:0006412 | denotes | translated |
T3205 | 227-249 | SO:0000205 | denotes | 3' untranslated region |
T3204 | 135-139 | PR:000012318 | denotes | PAX6 |
T3203 | 95-100 | SO:0000360 | denotes | codon |
T3202 | 65-75 | SO:0000319 | denotes | stop codon |