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PMC:1140370 / 9638-9890 JSONTXT

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Id Subject Object Predicate Lexical cue
T2970 0-252 sentence denotes The reaction mixtures (25 μl) contained 25 mM HEPES–NaOH (pH 7.5), 50 mM sodium acetate, 10 mM Mg(CH3COO)2, 1 mM DTT, 0.25 mg/ml BSA, 0.5 mM ATP-γ-S, 0.5 mM CaCl2, 10 fmol of 32P-labeled bubble substrate, and the indicated amount of Mcm4/6/7 proteins.
T2971 1-4 DT denotes The
T2972 14-22 NNS denotes mixtures
T2973 5-13 NN denotes reaction
T2974 31-40 VBD denotes contained
T2975 23-24 -LRB- denotes (
T2976 27-29 NN denotes μl
T2977 24-26 CD denotes 25
T2978 29-30 -RRB- denotes )
T2979 41-43 CD denotes 25
T2980 44-46 NN denotes mM
T2981 53-57 NN denotes NaOH
T2982 47-52 NN denotes HEPES
T2983 52-53 HYPH denotes –
T2984 58-59 -LRB- denotes (
T2985 59-61 NN denotes pH
T2986 62-65 CD denotes 7.5
T2987 65-66 -RRB- denotes )
T2988 66-68 , denotes ,
T2989 68-70 CD denotes 50
T2990 71-73 NN denotes mM
T2991 81-88 NN denotes acetate
T2992 74-80 NN denotes sodium
T2993 88-90 , denotes ,
T2994 90-92 CD denotes 10
T2995 93-95 NN denotes mM
T2996 99-105 NN denotes CH3COO
T2997 96-98 NN denotes Mg
T2998 98-99 -LRB- denotes (
T2999 105-106 -RRB- denotes )
T3000 106-107 CD denotes 2
T3001 107-109 , denotes ,
T3002 109-110 CD denotes 1
T3003 111-113 NN denotes mM
T3004 114-117 NN denotes DTT
T3005 117-119 , denotes ,
T3006 119-123 CD denotes 0.25
T3007 124-126 NN denotes mg
T3008 130-133 NN denotes BSA
T3009 126-127 SYM denotes /
T3010 127-129 NN denotes ml
T3011 133-135 , denotes ,
T3012 135-138 CD denotes 0.5
T3013 139-141 NN denotes mM
T3014 148-149 NN denotes S
T3015 142-145 NN denotes ATP
T3016 145-146 HYPH denotes -
T3017 146-147 SYM denotes γ
T3018 147-148 HYPH denotes -
T3019 149-151 , denotes ,
T3020 151-154 CD denotes 0.5
T3021 155-157 NN denotes mM
T3022 158-163 NN denotes CaCl2
T3023 163-165 , denotes ,
T3024 165-167 CD denotes 10
T3025 168-172 NN denotes fmol
T3026 173-175 IN denotes of
T3027 176-179 NN denotes 32P
T3028 180-187 VBN denotes labeled
T3029 179-180 HYPH denotes -
T3030 195-204 NN denotes substrate
T3031 188-194 NN denotes bubble
T3032 204-206 , denotes ,
T3033 206-209 CC denotes and
T3034 210-213 DT denotes the
T3035 224-230 NN denotes amount
T3036 214-223 VBN denotes indicated
T3037 231-233 IN denotes of
T3038 234-238 NN denotes Mcm4
T3039 243-251 NN denotes proteins
T3040 238-239 HYPH denotes /
T3041 239-240 CD denotes 6
T3042 240-241 HYPH denotes /
T3043 241-242 CD denotes 7
T3044 251-252 . denotes .
R1882 T2971 T2972 det The,mixtures
R1883 T2972 T2974 nsubj mixtures,contained
R1884 T2973 T2972 compound reaction,mixtures
R1885 T2975 T2976 punct (,μl
R1886 T2976 T2972 parataxis μl,mixtures
R1887 T2977 T2976 nummod 25,μl
R1888 T2978 T2976 punct ),μl
R1889 T2979 T2980 nummod 25,mM
R1890 T2980 T2981 compound mM,NaOH
R1891 T2981 T2974 dobj NaOH,contained
R1892 T2982 T2981 compound HEPES,NaOH
R1893 T2983 T2981 punct –,NaOH
R1894 T2984 T2985 punct (,pH
R1895 T2985 T2981 parataxis pH,NaOH
R1896 T2986 T2985 nummod 7.5,pH
R1897 T2987 T2985 punct ),pH
R1898 T2988 T2981 punct ", ",NaOH
R1899 T2989 T2990 nummod 50,mM
R1900 T2990 T2991 compound mM,acetate
R1901 T2991 T2981 conj acetate,NaOH
R1902 T2992 T2991 compound sodium,acetate
R1903 T2993 T2991 punct ", ",acetate
R1904 T2994 T2995 nummod 10,mM
R1905 T2995 T2996 nmod mM,CH3COO
R1906 T2996 T2991 conj CH3COO,acetate
R1907 T2997 T2996 nmod Mg,CH3COO
R1908 T2998 T2996 punct (,CH3COO
R1909 T2999 T2996 punct ),CH3COO
R1910 T3000 T2996 nummod 2,CH3COO
R1911 T3001 T2996 punct ", ",CH3COO
R1912 T3002 T3003 nummod 1,mM
R1913 T3003 T3004 compound mM,DTT
R1914 T3004 T2996 conj DTT,CH3COO
R1915 T3005 T3004 punct ", ",DTT
R1916 T3006 T3007 nummod 0.25,mg
R1917 T3007 T3008 nmod mg,BSA
R1918 T3008 T3004 conj BSA,DTT
R1919 T3009 T3010 punct /,ml
R1920 T3010 T3007 prep ml,mg
R1921 T3011 T3008 punct ", ",BSA
R1922 T3012 T3013 nummod 0.5,mM
R1923 T3013 T3014 nmod mM,S
R1924 T3014 T3008 conj S,BSA
R1925 T3015 T3014 nmod ATP,S
R1926 T3016 T3014 punct -,S
R1927 T3017 T3014 punct γ,S
R1928 T3018 T3014 punct -,S
R1929 T3019 T3014 punct ", ",S
R1930 T3020 T3021 nummod 0.5,mM
R1931 T3021 T3022 compound mM,CaCl2
R1932 T3022 T3014 conj CaCl2,S
R1933 T3023 T3022 punct ", ",CaCl2
R1934 T3024 T3025 nummod 10,fmol
R1935 T3025 T3022 conj fmol,CaCl2
R1936 T3026 T3025 prep of,fmol
R1937 T3027 T3028 npadvmod 32P,labeled
R1938 T3028 T3030 amod labeled,substrate
R1939 T3029 T3028 punct -,labeled
R1940 T3030 T3026 pobj substrate,of
R1941 T3031 T3030 compound bubble,substrate
R1942 T3032 T3025 punct ", ",fmol
R1943 T3033 T3025 cc and,fmol
R1944 T3034 T3035 det the,amount
R1945 T3035 T3025 conj amount,fmol
R1946 T3036 T3035 amod indicated,amount
R1947 T3037 T3035 prep of,amount
R1948 T3038 T3039 nmod Mcm4,proteins
R1949 T3039 T3037 pobj proteins,of
R1950 T3040 T3038 punct /,Mcm4
R1951 T3041 T3038 nummod 6,Mcm4
R1952 T3042 T3038 punct /,Mcm4
R1953 T3043 T3038 nummod 7,Mcm4
R1954 T3044 T2974 punct .,contained

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T2927 14-22 CHEBI:60004 denotes mixtures
T2928 47-52 CHEBI:46756 denotes HEPES
T2929 53-57 CHEBI:32145 denotes NaOH
T2930 74-88 CHEBI:32954 denotes sodium acetate
T2931 96-107 CHEBI:62964 denotes Mg(CH3COO)2
T2932 114-117 CHEBI:18320 denotes DTT
T2933 142-149 CHEBI:27575 denotes ATP-γ-S
T2934 158-163 CHEBI:3312 denotes CaCl2
T2935 176-179 CHEBI:37972 denotes 32P
T2936 180-187 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labeled
T2937 234-238 PR_EXT:000010246 denotes Mcm4
T2938 234-242 GO:0097373 denotes Mcm4/6/7
T2939 243-251 CHEBI_PR_EXT:protein denotes proteins

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T2901 14-22 CHEBI:60004 denotes mixtures
T2902 47-52 CHEBI:46756 denotes HEPES
T2903 53-57 CHEBI:32145 denotes NaOH
T2904 74-88 CHEBI:32954 denotes sodium acetate
T2905 96-107 CHEBI:62964 denotes Mg(CH3COO)2
T2906 114-117 CHEBI:18320 denotes DTT
T2907 142-149 CHEBI:27575 denotes ATP-γ-S
T2908 158-163 CHEBI:3312 denotes CaCl2
T2909 176-179 CHEBI:37972 denotes 32P
T2910 234-238 PR:000010246 denotes Mcm4
T2911 234-242 GO:0097373 denotes Mcm4/6/7