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PMC:1134658 / 11-254 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T193 4-10 NN denotes growth
T194 11-13 IN denotes of
T195 14-20 JJ denotes mature
T196 21-26 JJ denotes human
T197 27-28 NN denotes B
T198 29-34 NN denotes cells
T199 34-35 -COLON- denotes ;
T200 36-45 NN denotes induction
T201 46-48 IN denotes of
T202 49-53 NN denotes Smad
T203 54-69 NN denotes phosphorylation
T204 70-73 CC denotes and
T205 74-86 NN denotes upregulation
T206 87-89 IN denotes of
T207 90-93 NN denotes Id1
T208 105-115 NN denotes Background
T209 116-120 NN denotes Bone
T210 121-134 JJ denotes morphogenetic
T211 135-143 NN denotes proteins
T212 144-145 -LRB- denotes (
T213 145-149 NN denotes BMPs
T214 149-150 -RRB- denotes )
T215 151-157 VB denotes belong
T216 158-160 TO denotes to
T217 161-164 DT denotes the
T218 165-170 NN denotes TGF-β
T219 171-182 NN denotes superfamily
T220 183-186 CC denotes and
T221 187-190 VB denotes are
T222 191-199 VB denotes secreted
T223 200-208 NN denotes proteins
T224 209-213 IN denotes with
T225 214-225 JJ denotes pleiotropic
T226 226-231 NN denotes roles
T227 232-234 IN denotes in
T228 235-239 JJ denotes many
R72 T193 T194 arg1Of growth,of
R73 T198 T194 arg2Of cells,of
R74 T198 T195 arg1Of cells,mature
R75 T198 T196 arg1Of cells,human
R76 T198 T197 arg1Of cells,B
R78 T200 T201 arg1Of induction,of
R79 T203 T202 arg1Of phosphorylation,Smad
R80 T203 T204 arg1Of phosphorylation,and
R81 T204 T201 arg2Of and,of
R82 T205 T204 arg2Of upregulation,and
R83 T205 T206 arg1Of upregulation,of
R84 T207 T206 arg2Of Id1,of
R85 T211 T209 arg1Of proteins,Bone
R86 T211 T210 arg1Of proteins,morphogenetic
R87 T211 T212 arg1Of proteins,(
R88 T211 T215 arg1Of proteins,belong
R89 T211 T221 arg1Of proteins,are
R90 T213 T212 arg2Of BMPs,(
R91 T214 T212 arg3Of ),(
R92 T215 T216 arg1Of belong,to
R93 T215 T220 arg1Of belong,and
R94 T219 T216 arg2Of superfamily,to
R95 T219 T217 arg1Of superfamily,the
R96 T219 T218 arg1Of superfamily,TGF-β
R97 T221 T220 arg2Of are,and
R98 T221 T227 arg1Of are,in
R99 T223 T221 arg2Of proteins,are
R100 T223 T222 arg2Of proteins,secreted
R101 T223 T224 arg1Of proteins,with
R102 T226 T224 arg2Of roles,with
R103 T226 T225 arg1Of roles,pleiotropic

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T504 4-10 NN denotes growth
T505 11-13 IN denotes of
T506 14-20 JJ denotes mature
T507 21-26 JJ denotes human
T508 27-28 NNP denotes B
T509 29-34 NNS denotes cells
T510 34-35 : denotes ;
T511 36-45 NN denotes induction
T512 46-48 IN denotes of
T513 49-53 NNP denotes Smad
T514 54-69 NN denotes phosphorylation
T515 70-73 CC denotes and
T516 74-86 NN denotes upregulation
T517 87-89 IN denotes of
T518 90-93 NNP denotes Id1
T519 105-115 NNP denotes Background
T520 116-120 NNP denotes Bone
T521 121-134 JJ denotes morphogenetic
T522 135-143 NNS denotes proteins
T523 144-145 -LRB- denotes (
T524 145-149 NNS denotes BMPs
T525 149-150 -RRB- denotes )
T526 151-157 VBP denotes belong
T527 158-160 TO denotes to
T528 161-164 DT denotes the
T529 165-170 NNP denotes TGF-β
T530 171-182 RB denotes superfamily
T531 183-186 CC denotes and
T532 187-190 VBP denotes are
T533 191-199 VBN denotes secreted
T534 200-208 NNS denotes proteins
T535 209-213 IN denotes with
T536 214-225 JJ denotes pleiotropic
T537 226-231 NNS denotes roles
T538 232-234 IN denotes in
T539 235-239 JJ denotes many
R299 T506 T509 amod mature,cells
R300 T507 T509 amod human,cells
R301 T508 T509 compound B,cells
R302 T509 T505 pobj cells,of
R305 T512 T511 prep of,induction
R306 T513 T514 compound Smad,phosphorylation
R307 T514 T512 pobj phosphorylation,of
R308 T515 T514 cc and,phosphorylation
R309 T516 T514 conj upregulation,phosphorylation
R310 T517 T514 prep of,phosphorylation
R311 T518 T520 compound Id1,Bone
R312 T519 T520 compound Background,Bone
R313 T520 T522 nmod Bone,proteins
R314 T521 T522 amod morphogenetic,proteins
R315 T522 T517 pobj proteins,of
R316 T523 T526 punct (,belong
R317 T524 T526 nsubj BMPs,belong
R318 T525 T526 punct ),belong
R320 T527 T526 prep to,belong
R321 T528 T529 det the,TGF-β
R322 T529 T527 pobj TGF-β,to
R323 T530 T526 dobj superfamily,belong
R324 T531 T526 cc and,belong
R325 T532 T526 conj are,belong
R326 T533 T534 amod secreted,proteins
R327 T534 T532 attr proteins,are
R328 T535 T534 prep with,proteins
R329 T536 T537 amod pleiotropic,roles
R330 T537 T535 pobj roles,with
R331 T538 T537 prep in,roles
R298 T505 T504 prep of,growth

GO-BP

Id Subject Object Predicate Lexical cue
T174 4-10 http://purl.obolibrary.org/obo/GO_0040007 denotes growth
T176 54-69 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T180 54-86 http://purl.obolibrary.org/obo/GO_0042327 denotes phosphorylation and upregulation
T181 116-143 http://purl.obolibrary.org/obo/GO_0038055 denotes Bone morphogenetic proteins

GO-CC

Id Subject Object Predicate Lexical cue
T743 29-34 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T161 105-115 Sentence denotes Background
T2 96-104 Sentence denotes Abstract
T3 105-115 Sentence denotes Background

events-check-again

Id Subject Object Predicate Lexical cue
T855 74-86 Positive_regulation denotes upregulation
T856 90-93 Protein denotes Id1
T857 165-170 Protein denotes TGF-β
R678 T856 T855 themeOf Id1,upregulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T753 36-45 Positive_regulation denotes induction
T754 49-53 Protein denotes Smad
T755 54-69 Phosphorylation denotes phosphorylation
T756 165-182 Protein denotes TGF-β superfamily
R537 T754 T755 themeOf Smad,phosphorylation
R538 T755 T753 themeOf phosphorylation,induction

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T105 74-86 Positive_regulation denotes upregulation
T106 90-93 Protein denotes Id1
T107 165-170 Protein denotes TGF-β
R641 T106 T105 themeOf Id1,upregulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T421 90-93 P41134 denotes Id1
T422 116-143 P12644 denotes Bone morphogenetic proteins
T423 116-143 P12643 denotes Bone morphogenetic proteins
T424 116-143 P18075 denotes Bone morphogenetic proteins
T425 116-143 P22004 denotes Bone morphogenetic proteins
T426 145-149 P12643 denotes BMPs
T427 145-149 P22004 denotes BMPs
T428 145-149 P12644 denotes BMPs
T429 145-149 P18075 denotes BMPs
T430 165-170 P01137 denotes TGF-β

test2

Id Subject Object Predicate Lexical cue
T58 36-45 Positive_regulation denotes induction
T59 54-69 Phosphorylation denotes phosphorylation
T60 74-86 Positive_regulation denotes upregulation
T61 90-93 Protein denotes Id1
T62 165-170 Protein denotes TGF-β
R41 T59 T58 themeOf phosphorylation,induction
R42 T61 T60 themeOf Id1,upregulation

tees-test

Id Subject Object Predicate Lexical cue
T10 21-26 D006801 denotes human
T11 54-69 GO:0016310 denotes phosphorylation
T12 90-93 PR:P41134 denotes Id1
T13 90-93 PR:P20067 denotes Id1
T14 90-93 PR:P41135 denotes Id1
T15 90-93 PR:000000039 denotes Id1
T16 116-143 D019485 denotes Bone morphogenetic proteins
T17 116-143 D019485 denotes Bone morphogenetic proteins
T18 165-170 D016212 denotes TGF-β
T19 165-170 D016212 denotes TGF-β
T20 165-182 PR:000000008 denotes TGF-β superfamily
T21 200-208 CHEBI:36080 denotes proteins