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PMC:1064895 / 8209-8466 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T6535 148-151 Protein denotes CD4
T6534 113-116 Protein denotes CD4
T6530 148-151 Protein denotes CD4
T6529 113-116 Protein denotes CD4

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6959 148-151 Protein denotes CD4
T6958 113-116 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7220 148-151 Protein denotes CD4
T7219 113-116 Protein denotes CD4

2_test

Id Subject Object Predicate Lexical cue
15642134-8576572-4202025 232-234 8576572 denotes 19

biosemtest

Id Subject Object Predicate Lexical cue
T6637 207-219 UMLS/C0947322 denotes manufacturer
T6634 125-134 UMLS/C0220862 denotes isolation
T6633 237-241 UMLS/C1321301 denotes PBMC
T6616 207-219 UMLS/C1548599 denotes manufacturer
T6597 125-134 UMLS/C1608300 denotes isolation
T6589 152-162 UMLS/C0026032 denotes microbeads
T6587 125-134 UMLS/C1608299 denotes isolation
T6586 125-134 UMLS/C1548355 denotes isolation
T6568 138-142 UMLS/C0599662 denotes MACS
T6564 125-134 UMLS/C0205409 denotes isolation
T6558 125-134 UMLS/C1547129 denotes isolation
T6551 118-124 UMLS/C0039194 denotes T-cell
T6715 138-142 UMLS/C1416956 denotes MACS
T6709 207-219 UMLS/C1546933 denotes manufacturer
T6694 188-199 UMLS/C0034866 denotes recommended
T6691 125-134 UMLS/C0204727 denotes isolation
T6656 207-219 UMLS/C1705426 denotes manufacturer
T6078 103-108 UMLS/C0444504 denotes s ± S
T6076 52-55 UMLS/C0542559 denotes up
T6075 103-108 UMLS/C2348143 denotes s ± S
T6074 52-55 UMLS/C1552685 denotes up
T6068 38-46 UMLS/C0220814 denotes ures wer
T6064 52-55 UMLS/C0036849 denotes up
T6058 25-32 UMLS/C1510438 denotes yed. Al
T6055 78-85 UMLS/C1546471 denotes lts are
T6047 38-46 UMLS/C0010453 denotes ures wer
T6046 52-55 UMLS/C0001774 denotes up
T6045 2-8 UMLS/C1698986 denotes red at
T6040 78-85 UMLS/C1280519 denotes lts are
T6037 52-55 UMLS/C1442518 denotes up
T6025 78-85 UMLS/C0332294 denotes lts are
T6024 78-85 UMLS/C1274040 denotes lts are
T6022 103-108 UMLS/C0876919 denotes s ± S
T6015 90-99 UMLS/C1171362 denotes essed as
T6013 38-46 UMLS/C2242979 denotes ures wer
T6009 90-99 UMLS/C1515670 denotes essed as
T6008 56-58 UMLS/C0547043 denotes n
T6001 25-32 UMLS/C0005507 denotes yed. Al
T6000 38-46 UMLS/C0430400 denotes ures wer
T5992 90-99 UMLS/C0017262 denotes essed as
T5929 103-108 UMLS/C2347634 denotes s ± S
T5922 103-108 UMLS/C1704970 denotes s ± S
T5980 25-32 UMLS/C0243073 denotes yed. Al
T5979 56-58 UMLS/C1282911 denotes n
T5978 56-58 UMLS/C1282910 denotes n
T5969 19-24 UMLS/C1720302 denotes l ass
T5968 62-72 UMLS/C0205174 denotes licate, an
T5966 52-55 UMLS/C1318139 denotes up
T5953 52-55 UMLS/C1705195 denotes up
T5951 52-55 UMLS/C1552652 denotes up

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6761 242-246 VB denotes were
T6760 237-241 NN denotes PBMC
T6759 234-235 -RRB- denotes ]
T6758 232-234 CD denotes 19
T6757 231-232 -LRB- denotes [
T6756 229-230 -RRB- denotes )
T6755 221-229 NNP denotes Miltenyi
T6754 220-221 -LRB- denotes (
T6753 207-219 NN denotes manufacturer
T6752 203-206 DT denotes the
T6751 200-202 IN denotes by
T6750 188-199 VB denotes recommended
T6749 185-187 IN denotes as
T6748 173-184 RB denotes essentially
T6747 168-172 VB denotes used
T6746 163-167 VB denotes were
T6745 152-162 NN denotes microbeads
T6744 143-151 NN denotes Anti-CD4
T6743 138-142 NN denotes MACS
T6742 135-137 IN denotes by
T6741 125-134 NN denotes isolation
T6740 118-124 NN denotes T-cell
T6739 113-117 JJ denotes CD4+
T6278 107-110 NN denotes SEM
T6277 105-106 CC denotes ±
T6276 99-104 NN denotes means
T6275 96-98 IN denotes as
T6274 86-95 VB denotes expressed
T6273 82-85 VB denotes are
T6272 74-81 NN denotes results
T6271 70-73 CC denotes and
T6270 68-69 -COMMA- denotes ,
T6269 58-68 NN denotes triplicate
T6268 55-57 IN denotes in
T6267 52-54 RP denotes up
T6266 48-51 VB denotes set
T6265 43-47 VB denotes were
T6264 34-42 NN denotes cultures
T6263 30-33 DT denotes All
T6262 21-28 VB denotes assayed
T6261 15-20 IN denotes until
T6260 9-14 NN denotes -20°C
T6259 6-8 IN denotes at
R3305 T6260 T6259 arg2Of -20°C,at
R3306 T6262 T6261 arg2Of assayed,until
R3307 T6264 T6263 arg1Of cultures,All
R3308 T6264 T6265 arg1Of cultures,were
R3309 T6264 T6266 arg2Of cultures,set
R3310 T6266 T6265 arg2Of set,were
R3311 T6266 T6267 arg1Of set,up
R3312 T6266 T6268 arg1Of set,in
R3313 T6266 T6271 arg1Of set,and
R3314 T6269 T6268 arg2Of triplicate,in
R3315 T6271 T6270 arg1Of and,","
R3316 T6272 T6273 arg1Of results,are
R3317 T6272 T6274 arg2Of results,expressed
R3318 T6274 T6271 arg2Of expressed,and
R3319 T6274 T6273 arg2Of expressed,are
R3320 T6274 T6275 arg1Of expressed,as
R3321 T6276 T6277 arg1Of means,±
R3322 T6277 T6275 arg2Of ±,as
R3323 T6278 T6277 arg2Of SEM,±
R3527 T6741 T6739 arg1Of isolation,CD4+
R3528 T6741 T6740 arg1Of isolation,T-cell
R3529 T6741 T6742 arg1Of isolation,by
R3530 T6743 T6742 arg2Of MACS,by
R3531 T6745 T6744 arg1Of microbeads,Anti-CD4
R3532 T6745 T6746 arg1Of microbeads,were
R3533 T6745 T6747 arg2Of microbeads,used
R3534 T6747 T6746 arg2Of used,were
R3535 T6747 T6748 arg1Of used,essentially
R3536 T6747 T6749 arg1Of used,as
R3537 T6747 T6757 arg1Of used,[
R3538 T6750 T6749 arg2Of recommended,as
R3539 T6750 T6754 arg1Of recommended,(
R3540 T6753 T6750 arg1Of manufacturer,recommended
R3541 T6753 T6751 arg2Of manufacturer,by
R3542 T6753 T6752 arg1Of manufacturer,the
R3543 T6755 T6754 arg2Of Miltenyi,(
R3544 T6756 T6754 arg3Of ),(
R3545 T6758 T6757 arg2Of 19,[
R3546 T6759 T6757 arg3Of ],[
R3547 T6760 T6761 arg1Of PBMC,were

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T6931 148-151 Protein denotes CD4
T6930 113-116 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6954 148-151 http://www.uniprot.org/uniprot/P01730 denotes CD4
T6953 113-116 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-CC

Id Subject Object Predicate Lexical cue
T6936 120-124 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T6725 143-236 Sentence denotes Anti-CD4 microbeads were used essentially as recommended by the manufacturer (Miltenyi) [19].
T6724 113-142 Sentence denotes CD4+ T-cell isolation by MACS
T6089 30-111 Sentence denotes All cultures were set up in triplicate, and results are expressed as means ± SEM.
T60 30-111 Sentence denotes All cultures were set up in triplicate, and results are expressed as means ± SEM.
T61 113-142 Sentence denotes CD4+ T-cell isolation by MACS
T62 143-236 Sentence denotes Anti-CD4 microbeads were used essentially as recommended by the manufacturer (Miltenyi) [19].

simple1

Id Subject Object Predicate Lexical cue
T6949 148-151 Protein denotes CD4
T6948 113-116 Protein denotes CD4

DLUT931

Id Subject Object Predicate Lexical cue
T6969 148-151 Protein denotes CD4
T6968 113-116 Protein denotes CD4

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7215 237-241 Entity denotes PBMC
T7207 135-142 Protein denotes by MACS
T7200 118-124 Entity denotes T-cell
T7199 143-235 Protein denotes Anti-CD4 microbeads were used essentially as recommended by the manufacturer (Miltenyi) [19]

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7002 242-246 VBD denotes were
T7001 237-241 NNP denotes PBMC
T7000 235-236 . denotes .
T6999 234-235 NNP denotes ]
T6998 232-234 CD denotes 19
T6997 231-232 NNP denotes [
T6996 229-230 -RRB- denotes )
T6995 221-229 NNP denotes Miltenyi
T6994 220-221 -LRB- denotes (
T6993 207-219 NN denotes manufacturer
T6992 203-206 DT denotes the
T6991 200-202 IN denotes by
T6990 188-199 VBN denotes recommended
T6989 185-187 IN denotes as
T6988 173-184 RB denotes essentially
T6987 168-172 VBN denotes used
T6986 163-167 VBD denotes were
T6985 152-162 NNS denotes microbeads
T6984 143-151 JJ denotes Anti-CD4
T6983 138-142 NNP denotes MACS
T6982 135-137 IN denotes by
T6981 125-134 NN denotes isolation
T6980 118-124 NNP denotes T-cell
T6979 116-117 CD denotes +
T6978 113-116 CD denotes CD4
T6490 110-111 . denotes .
T6489 107-110 NNP denotes SEM
T6488 105-106 VBP denotes ±
T6487 99-104 NNS denotes means
T6486 96-98 IN denotes as
T6485 86-95 VBN denotes expressed
T6484 82-85 VBP denotes are
T6483 74-81 NNS denotes results
T6482 70-73 CC denotes and
T6481 68-69 , denotes ,
T6480 58-68 NN denotes triplicate
T6479 55-57 IN denotes in
T6478 52-54 RP denotes up
T6477 48-51 VBN denotes set
T6476 43-47 VBD denotes were
T6475 34-42 NNS denotes cultures
T6474 30-33 DT denotes All
T6473 28-29 . denotes .
T6472 21-28 VBN denotes assayed
T6471 15-20 IN denotes until
T6470 13-14 NNP denotes C
T6469 12-13 CD denotes °
T6468 9-12 CD denotes -20
T6467 6-8 IN denotes at
R3502 T6468 T6469 nummod -20,°
R3503 T6469 T6470 nummod °,C
R3504 T6470 T6467 pobj C,at
R3505 T6471 T6472 mark until,assayed
R3508 T6474 T6475 det All,cultures
R3509 T6475 T6477 nsubjpass cultures,set
R3510 T6476 T6477 auxpass were,set
R3511 T6477 T6477 ROOT set,set
R3512 T6478 T6477 prt up,set
R3513 T6479 T6477 prep in,set
R3514 T6480 T6479 pobj triplicate,in
R3515 T6481 T6477 punct ",",set
R3516 T6482 T6477 cc and,set
R3517 T6483 T6485 nsubjpass results,expressed
R3518 T6484 T6485 auxpass are,expressed
R3519 T6485 T6477 conj expressed,set
R3520 T6486 T6485 prep as,expressed
R3521 T6487 T6486 pobj means,as
R3522 T6488 T6489 compound ±,SEM
R3523 T6489 T6487 dobj SEM,means
R3524 T6490 T6485 punct .,expressed
R3721 T6978 T6981 nummod CD4,isolation
R3722 T6979 T6981 nummod +,isolation
R3723 T6980 T6981 compound T-cell,isolation
R3724 T6981 T6987 nsubjpass isolation,used
R3725 T6982 T6981 prep by,isolation
R3726 T6983 T6982 pobj MACS,by
R3727 T6984 T6985 amod Anti-CD4,microbeads
R3728 T6985 T6987 nsubjpass microbeads,used
R3729 T6986 T6987 auxpass were,used
R3730 T6987 T6987 ROOT used,used
R3731 T6988 T6990 advmod essentially,recommended
R3732 T6989 T6990 mark as,recommended
R3733 T6990 T6987 advcl recommended,used
R3734 T6991 T6990 agent by,recommended
R3735 T6992 T6993 det the,manufacturer
R3736 T6993 T6991 pobj manufacturer,by
R3737 T6994 T6993 punct (,manufacturer
R3738 T6995 T6993 appos Miltenyi,manufacturer
R3739 T6996 T6993 punct ),manufacturer
R3740 T6997 T6999 nmod [,]
R3741 T6998 T6999 nummod 19,]
R3742 T6999 T6990 dobj ],recommended
R3743 T7000 T6987 punct .,used

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6942 148-151 Protein denotes CD4
T6941 113-116 Protein denotes CD4

testone

Id Subject Object Predicate Lexical cue
T6525 148-151 Protein denotes CD4
T6524 113-116 Protein denotes CD4