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PMC:1064873 / 574-811 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T431 50-59 OCCURRENCE denotes increased
T425 139-148 OCCURRENCE denotes sustained
T399 228-230 country_code denotes by
T398 207-209 country_code denotes it
T397 149-151 country_code denotes in
T396 31-33 state denotes IL
T225 231-234 DT denotes the
T224 228-230 IN denotes by
T223 218-227 JJ denotes augmented
T222 214-217 RB denotes not
T221 210-213 VBD denotes was
T220 207-209 PRP denotes it
T219 203-206 CC denotes but
T218 201-202 , denotes ,
T217 199-201 NNP denotes RA
T216 196-198 IN denotes of
T215 190-195 NNS denotes cells
T214 188-189 NN denotes T
T213 186-187 NN denotes +
T212 185-186 CD denotes 4
T211 183-185 NNP denotes CD
T210 176-182 NN denotes tissue
T209 167-175 NN denotes synovial
T208 163-166 CC denotes and
T207 157-162 NN denotes blood
T206 152-156 DT denotes both
T205 149-151 IN denotes in
T204 139-148 VBN denotes sustained
T203 135-138 VBD denotes was
T202 133-134 CD denotes 3
T201 119-132 NN denotes transcription
T200 116-118 IN denotes of
T199 106-115 NN denotes activator
T198 102-105 CC denotes and
T197 91-101 NN denotes transducer
T196 84-90 NN denotes signal
T195 81-83 IN denotes of
T194 65-80 NN denotes phosphorylation
T193 61-64 DT denotes The
T192 59-60 . denotes .
T191 50-59 VBN denotes increased
T190 46-49 VBD denotes was
T189 37-45 NN denotes receptor
T188 34-36 CD denotes 10
T187 31-34 NNP denotes IL-
T186 29-30 CD denotes 1
T185 24-28 NN denotes type
T184 20-23 DT denotes the
T183 17-19 IN denotes of
T182 6-16 NN denotes expression

biosemtest

Id Subject Object Predicate Lexical cue
T839 214-217 UMLS/C1518422 denotes not
T709 50-59 UMLS/C0442805 denotes increased
T703 188-195 UMLS/C0039194 denotes T cells
T699 50-59 UMLS/C0442808 denotes increased
T691 157-162 UMLS/C0229664 denotes blood
T684 31-45 UMLS/C0247771 denotes IL-10 receptor
T655 84-134 UP/Q19S50 denotes signal transducer and activator of transcription 3
T648 6-16 UMLS/C0185117 denotes expression
T561 6-16 UMLS/C0017262 denotes expression
T529 167-182 UMLS/C1267208 denotes synovial tissue
T526 157-162 UMLS/C0392895 denotes blood
T475 84-134 UP/P52631 denotes signal transducer and activator of transcription 3
T470 84-134 UP/P42227 denotes signal transducer and activator of transcription 3
T463 84-134 UP/P40763 denotes signal transducer and activator of transcription 3
T456 65-80 UMLS/C0031715 denotes phosphorylation
T450 84-134 UP/Q6DV79 denotes signal transducer and activator of transcription 3
T777 218-227 UMLS/C0205217 denotes augmented
T776 50-59 UMLS/C0205217 denotes increased
T774 139-148 UMLS/C0443318 denotes sustained
T769 157-162 UMLS/C0005767 denotes blood
T766 157-162 UMLS/C0005768 denotes blood
T753 84-134 UP/P61635 denotes signal transducer and activator of transcription 3
T744 84-134 UMLS/C0253050 denotes signal transducer and activator of transcription 3
T484 203-206 UMLS/C0005341 denotes but

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1282 231-234 DT denotes the
T1281 228-230 IN denotes by
T1280 218-227 VB denotes augmented
T1279 214-217 RB denotes not
T1278 210-213 VB denotes was
T1277 207-209 PRP denotes it
T1276 203-206 CC denotes but
T1275 201-202 -COMMA- denotes ,
T1274 199-201 NN denotes RA
T1273 196-198 IN denotes of
T1272 190-195 NN denotes cells
T1271 188-189 NN denotes T
T1270 183-187 JJ denotes CD4+
T1269 176-182 NN denotes tissue
T1268 167-175 JJ denotes synovial
T1267 163-166 CC denotes and
T1266 157-162 NN denotes blood
T1265 152-156 CC denotes both
T1264 149-151 IN denotes in
T1263 139-148 JJ denotes sustained
T1262 135-138 VB denotes was
T1261 133-134 CD denotes 3
T1260 119-132 NN denotes transcription
T1259 116-118 IN denotes of
T1258 106-115 NN denotes activator
T1257 102-105 CC denotes and
T1256 91-101 NN denotes transducer
T1255 84-90 NN denotes signal
T1254 81-83 IN denotes of
T1253 65-80 NN denotes phosphorylation
T1252 61-64 DT denotes The
T1251 50-59 VB denotes increased
T1250 46-49 VB denotes was
T1249 37-45 NN denotes receptor
T1248 31-36 NN denotes IL-10
T1247 29-30 CD denotes 1
T1246 24-28 NN denotes type
T1245 20-23 DT denotes the
T1244 17-19 IN denotes of
T1243 6-16 NN denotes expression
R139 T1243 T1244 arg1Of expression,of
R140 T1243 T1250 arg1Of expression,was
R141 T1243 T1251 arg2Of expression,increased
R142 T1249 T1244 arg2Of receptor,of
R143 T1249 T1245 arg1Of receptor,the
R144 T1249 T1246 arg1Of receptor,type
R145 T1249 T1247 arg1Of receptor,1
R146 T1249 T1248 arg1Of receptor,IL-10
R148 T1251 T1250 arg2Of increased,was
R149 T1253 T1252 arg1Of phosphorylation,The
R150 T1253 T1254 arg1Of phosphorylation,of
R151 T1253 T1262 arg1Of phosphorylation,was
R152 T1253 T1263 arg1Of phosphorylation,sustained
R153 T1256 T1257 arg1Of transducer,and
R154 T1258 T1257 arg2Of activator,and
R155 T1260 T1254 arg2Of transcription,of
R156 T1260 T1255 arg1Of transcription,signal
R157 T1260 T1256 arg1Of transcription,transducer
R158 T1260 T1258 arg1Of transcription,activator
R159 T1260 T1259 arg1Of transcription,of
R160 T1260 T1261 arg1Of transcription,3
R161 T1262 T1264 arg1Of was,in
R162 T1262 T1276 arg1Of was,but
R163 T1263 T1262 arg2Of sustained,was
R164 T1266 T1267 arg1Of blood,and
R165 T1267 T1264 arg2Of and,in
R166 T1267 T1265 arg1Of and,both
R167 T1272 T1267 arg2Of cells,and
R168 T1272 T1268 arg1Of cells,synovial
R169 T1272 T1269 arg1Of cells,tissue
R170 T1272 T1270 arg1Of cells,CD4+
R171 T1272 T1271 arg1Of cells,T
R172 T1272 T1273 arg1Of cells,of
R173 T1274 T1273 arg2Of RA,of
R174 T1276 T1275 arg1Of but,","
R175 T1277 T1278 arg1Of it,was
R176 T1277 T1280 arg2Of it,augmented
R177 T1280 T1276 arg2Of augmented,but
R178 T1280 T1278 arg2Of augmented,was
R179 T1280 T1279 arg1Of augmented,not
R180 T1280 T1281 arg1Of augmented,by

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T978 24-45 Protein denotes type 1 IL-10 receptor
T979 84-134 Protein denotes signal transducer and activator of transcription 3
T980 183-186 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1032 31-36 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1043 183-186 http://www.uniprot.org/uniprot/P01730 denotes CD4

UBERON-AE

Id Subject Object Predicate Lexical cue
T436 176-182 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
T435 157-162 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

GO-BP

Id Subject Object Predicate Lexical cue
T910 119-132 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T908 65-80 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T907 31-45 http://purl.obolibrary.org/obo/GO_0004920 denotes IL-10 receptor

GO-CC

Id Subject Object Predicate Lexical cue
T1017 190-195 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1010 31-45 http://purl.obolibrary.org/obo/GO_0004920 denotes IL-10 receptor
T1009 29-33 http://purl.obolibrary.org/obo/GO_0005149 denotes 1 IL
T1001 31-36 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1133 24-45 Protein denotes type 1 IL-10 receptor
T1134 84-134 Protein denotes signal transducer and activator of transcription 3
T1135 183-186 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1932 183-186 Protein denotes CD4
T1931 84-134 Protein denotes signal transducer and activator of transcription 3
T1927 24-45 Protein denotes type 1 IL-10 receptor
T1957 65-80 Phosphorylation denotes phosphorylation
T1956 218-227 Positive_regulation denotes augmented
T1954 6-16 Gene_expression denotes expression
T1953 50-59 Positive_regulation denotes increased
R629 T1927 T1954 themeOf type 1 IL-10 receptor,expression
R631 T1931 T1956 themeOf signal transducer and activator of transcription 3,augmented
R632 T1931 T1957 themeOf signal transducer and activator of transcription 3,phosphorylation
R641 T1954 T1953 themeOf expression,increased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1453 65-80 Phosphorylation denotes phosphorylation
T1452 218-227 Positive_regulation denotes augmented
T1451 50-59 Positive_regulation denotes increased
T1449 6-16 Gene_expression denotes expression
T1428 183-186 Protein denotes CD4
T1427 84-134 Protein denotes signal transducer and activator of transcription 3
T1423 24-45 Protein denotes type 1 IL-10 receptor
R319 T1423 T1449 themeOf type 1 IL-10 receptor,expression
R321 T1427 T1452 themeOf signal transducer and activator of transcription 3,augmented
R322 T1427 T1453 themeOf signal transducer and activator of transcription 3,phosphorylation
R328 T1449 T1451 themeOf expression,increased

DLUT931

Id Subject Object Predicate Lexical cue
T1499 218-227 Positive_regulation denotes augmented
T1498 65-80 Phosphorylation denotes phosphorylation
T1497 50-59 Positive_regulation denotes increased
T1496 6-16 Gene_expression denotes expression
T1473 183-186 Protein denotes CD4
T1472 84-134 Protein denotes signal transducer and activator of transcription 3
T1468 24-45 Protein denotes type 1 IL-10 receptor
R334 T1468 T1496 themeOf type 1 IL-10 receptor,expression
R337 T1472 T1498 themeOf signal transducer and activator of transcription 3,phosphorylation
R347 T1496 T1497 themeOf expression,increased
R348 T1498 T1499 themeOf phosphorylation,augmented

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1910 61-134 Phosphorylation denotes The phosphorylation of signal transducer and activator of transcription 3
T1904 17-45 Protein denotes of the type 1 IL-10 receptor
T1902 81-134 Protein denotes of signal transducer and activator of transcription 3
T1894 31-36 Protein denotes IL-10
T1867 17-45 Protein denotes of the type 1 IL-10 receptor
T1861 199-201 Protein denotes RA
T1860 183-202 Entity denotes CD4+ T cells of RA,
R624 T1902 T1910 themeOf of signal transducer and activator of transcription 3,The phosphorylation of signal transducer and activator of transcription 3

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1683 231-234 DT denotes the
T1682 228-230 IN denotes by
T1681 218-227 VBN denotes augmented
T1680 214-217 RB denotes not
T1679 210-213 VBD denotes was
T1678 207-209 PRP denotes it
T1677 203-206 CC denotes but
T1676 201-202 , denotes ,
T1675 199-201 NNP denotes RA
T1674 196-198 IN denotes of
T1673 190-195 NNS denotes cells
T1672 188-189 NNP denotes T
T1671 186-187 NNP denotes +
T1670 183-186 NNP denotes CD4
T1669 176-182 NN denotes tissue
T1668 167-175 JJ denotes synovial
T1667 163-166 CC denotes and
T1666 157-162 NN denotes blood
T1665 152-156 DT denotes both
T1664 149-151 IN denotes in
T1663 139-148 VBN denotes sustained
T1662 135-138 VBD denotes was
T1661 133-134 CD denotes 3
T1660 119-132 NN denotes transcription
T1659 116-118 IN denotes of
T1658 106-115 NN denotes activator
T1657 102-105 CC denotes and
T1656 91-101 NN denotes transducer
T1655 84-90 NN denotes signal
T1654 81-83 IN denotes of
T1653 65-80 NN denotes phosphorylation
T1652 61-64 DT denotes The
T1651 59-60 . denotes .
T1650 50-59 VBN denotes increased
T1649 46-49 VBD denotes was
T1648 37-45 NN denotes receptor
T1647 31-36 NN denotes IL-10
T1646 29-30 CD denotes 1
T1645 24-28 NN denotes type
T1644 20-23 DT denotes the
T1643 17-19 IN denotes of
T1642 6-16 NN denotes expression
R415 T1642 T1650 nsubjpass expression,increased
R416 T1643 T1642 prep of,expression
R417 T1644 T1645 det the,type
R418 T1645 T1648 nmod type,receptor
R419 T1646 T1647 nummod 1,IL-10
R420 T1647 T1648 compound IL-10,receptor
R421 T1648 T1643 pobj receptor,of
R422 T1649 T1650 auxpass was,increased
R425 T1652 T1653 det The,phosphorylation
R426 T1653 T1663 nsubjpass phosphorylation,sustained
R427 T1654 T1653 prep of,phosphorylation
R428 T1655 T1656 compound signal,transducer
R429 T1656 T1654 pobj transducer,of
R430 T1657 T1656 cc and,transducer
R431 T1658 T1656 conj activator,transducer
R432 T1659 T1658 prep of,activator
R433 T1660 T1659 pobj transcription,of
R434 T1661 T1660 nummod 3,transcription
R435 T1662 T1663 auxpass was,sustained
R436 T1663 T1663 ROOT sustained,sustained
R437 T1664 T1663 prep in,sustained
R438 T1665 T1666 det both,blood
R439 T1666 T1673 nmod blood,cells
R440 T1667 T1666 cc and,blood
R441 T1668 T1669 amod synovial,tissue
R442 T1669 T1666 conj tissue,blood
R443 T1670 T1673 compound CD4,cells
R444 T1671 T1673 compound +,cells
R445 T1672 T1673 compound T,cells
R446 T1673 T1664 pobj cells,in
R447 T1674 T1673 prep of,cells
R448 T1675 T1674 pobj RA,of
R449 T1676 T1663 punct ",",sustained
R450 T1677 T1663 cc but,sustained
R451 T1678 T1681 nsubjpass it,augmented
R452 T1679 T1681 auxpass was,augmented
R453 T1680 T1681 neg not,augmented
R454 T1681 T1663 conj augmented,sustained
R455 T1682 T1681 agent by,augmented

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1102 24-45 Protein denotes type 1 IL-10 receptor
T1106 6-16 Gene_expression denotes expression
T1107 50-59 Positive_regulation denotes increased
R658 T1102 T1106 themeOf type 1 IL-10 receptor,expression
R659 T1106 T1107 themeOf expression,increased

testone

Id Subject Object Predicate Lexical cue
T68 218-227 Positive_regulation denotes augmented
T67 50-59 Positive_regulation denotes increased
T66 6-16 Gene_expression denotes expression
T45 183-186 Protein denotes CD4
T44 84-134 Protein denotes signal transducer and activator of transcription 3
T43 24-45 Protein denotes type 1 IL-10 receptor
R5 T43 T66 themeOf type 1 IL-10 receptor,expression
R13 T66 T67 themeOf expression,increased