BB-rel+ner@ldeleger:BB-rel+ner-F-25036636-003 JSONTXT

{"project":"bionlp-ost-19-BB-rel-ner-dev","denotations":[{"id":"T1","span":{"begin":20,"end":26},"obj":"Habitat"},{"id":"T2","span":{"begin":75,"end":96},"obj":"Microorganism"},{"id":"T3","span":{"begin":284,"end":300},"obj":"Microorganism"},{"id":"T4","span":{"begin":304,"end":311},"obj":"Habitat"},{"id":"T5","span":{"begin":322,"end":328},"obj":"Geographical"},{"id":"T6","span":{"begin":333,"end":346},"obj":"Geographical"},{"id":"T7","span":{"begin":427,"end":449},"obj":"Microorganism"},{"id":"T8","span":{"begin":512,"end":519},"obj":"Habitat"},{"id":"T9","span":{"begin":529,"end":546},"obj":"Microorganism"},{"id":"T10","span":{"begin":587,"end":617},"obj":"Microorganism"},{"id":"T11","span":{"begin":671,"end":688},"obj":"Microorganism"},{"id":"T12","span":{"begin":711,"end":723},"obj":"Phenotype"},{"id":"T13","span":{"begin":753,"end":767},"obj":"Habitat"},{"id":"E1","span":{"begin":75,"end":96},"obj":"Lives_In"},{"id":"E2","span":{"begin":284,"end":300},"obj":"Lives_In"},{"id":"E3","span":{"begin":284,"end":300},"obj":"Lives_In"},{"id":"E4","span":{"begin":284,"end":300},"obj":"Lives_In"},{"id":"E5","span":{"begin":427,"end":449},"obj":"Lives_In"},{"id":"E6","span":{"begin":427,"end":449},"obj":"Lives_In"},{"id":"E7","span":{"begin":427,"end":449},"obj":"Lives_In"},{"id":"E8","span":{"begin":529,"end":546},"obj":"Lives_In"},{"id":"E9","span":{"begin":587,"end":617},"obj":"Lives_In"},{"id":"E10","span":{"begin":671,"end":688},"obj":"Lives_In"},{"id":"E11","span":{"begin":671,"end":688},"obj":"Exhibits"}],"relations":[{"id":"R1","pred":"Microorganism","subj":"E1","obj":"T2"},{"id":"R2","pred":"Location","subj":"E1","obj":"T1"},{"id":"R3","pred":"Microorganism","subj":"E2","obj":"T3"},{"id":"R4","pred":"Location","subj":"E2","obj":"T4"},{"id":"R5","pred":"Microorganism","subj":"E3","obj":"T3"},{"id":"R6","pred":"Location","subj":"E3","obj":"T6"},{"id":"R7","pred":"Microorganism","subj":"E4","obj":"T3"},{"id":"R8","pred":"Location","subj":"E4","obj":"T5"},{"id":"R9","pred":"Microorganism","subj":"E5","obj":"T7"},{"id":"R10","pred":"Location","subj":"E5","obj":"T6"},{"id":"R11","pred":"Microorganism","subj":"E6","obj":"T7"},{"id":"R12","pred":"Location","subj":"E6","obj":"T5"},{"id":"R13","pred":"Microorganism","subj":"E7","obj":"T7"},{"id":"R14","pred":"Location","subj":"E7","obj":"T4"},{"id":"R15","pred":"Microorganism","subj":"E8","obj":"T9"},{"id":"R16","pred":"Location","subj":"E8","obj":"T8"},{"id":"R17","pred":"Microorganism","subj":"E9","obj":"T10"},{"id":"R18","pred":"Location","subj":"E9","obj":"T8"},{"id":"R19","pred":"Microorganism","subj":"E10","obj":"T11"},{"id":"R20","pred":"Location","subj":"E10","obj":"T13"},{"id":"R21","pred":"Microorganism","subj":"E11","obj":"T11"},{"id":"R22","pred":"Property","subj":"E11","obj":"T12"}],"text":"However, to date, a cheese-associated mgl gene has only been identified in Brevibacterium linens ( Amarita et al., 2004, Monnet et al., 2010 and Schröder et al., 2011). Our metagenomic sequencing uncovered previously undescribed mgl sequences with high sequence similarity to various γ-Proteobacteria in cheeses from both Europe and North America ( Table S4B). Several of these previously undescribed mgl sequences belonged to Pseudoalteromonas spp. ( Figures 4C and S4B). We mapped metagenomic reads from three cheeses in which Pseudoalteromonas was abundant to the reference genome of Pseudoalteromonas haloplanktis (99.5% pairwise identity, Table S4C). Additionally, Pseudoalteromonas is known to have many cold-adapted enzymes that function in the polar seawater where this bacterium typically grows ( Médigue et al., 2005).\n"}