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Id | Subject | Object | Predicate | Lexical cue | NCBI_Taxonomy | OntoBiotope |
---|---|---|---|---|---|---|
T1 | 0-68 | Title | denotes | Etiology and epidemiology of diarrhea in children in Hanoi, Vietnam. | ||
T6 | 41-49 | Habitat | denotes | children | OBT:003188 | |
T2 | 69-272 | Paragraph | denotes | This paper provides a preliminary picture of diarrhea with regards to etiology, clinical symptoms, and some related epidemiologic factors in children less than five years of age living in Hanoi, Vietnam. | ||
T7 | 210-246 | Habitat | denotes | children less than five years of age | OBT:003188 | |
T3 | 273-586 | Paragraph | denotes | The study population included 587 children with diarrhea and 249 age-matched healthy controls. The identification of pathogens was carried out by the conventional methods in combination with ELISA, immunoseparation, and PCR. The antibiotic susceptibility was determined by MIC following the NCCLS recommendations. | ||
T8 | 277-293 | Habitat | denotes | study population | OBT:003188 | |
T9 | 307-329 | Habitat | denotes | children with diarrhea | OBT:003188|OBT:003156 | |
T10 | 338-366 | Habitat | denotes | age-matched healthy controls | OBT:003188|OBT:002712 | |
T11 | 390-399 | Phenotype | denotes | pathogens | OBT:002806 | |
T12 | 502-527 | Phenotype | denotes | antibiotic susceptibility | OBT:002675 | |
T4 | 587-2024 | Paragraph | denotes | Of those with diarrhea, 40.9% were less than one year old and 71.0% were less than two years old. A potential pathogen was identified in 67.3% of children with diarrhea. They were group A rotavirus, diarrheagenic Escherichia coli, Shigella spp, and enterotoxigenic Bacteroides fragilis, with prevalences of 46.7%, 22.5%, 4.7%, and 7.3%, respectively. No Salmonella spp or Vibrio cholerae were isolated. Rotavirus and diarrheagenic E. coli were predominant in children less than two years of age, while Shigella spp, and enterotoxigenic B. fragilis were mostly seen in the older children. Diarrheagenic E. coli and Shigella spp showed high prevalence of resistance to ampicillin, chloramphenicol, and to trimethoprim/sulfamethoxazole. Children attending the hospitals had fever (43.6%), vomiting (53.8%), and dehydration (82.6%). Watery stool was predominant with a prevalence of 66.4%, followed by mucous stool (21.0%). The mean episodes of stools per day was seven, ranging from two to 23 episodes. Before attending hospitals, 162/587 (27.6%) children had been given antibiotics. Overall, more children got diarrhea in (i) poor families; (ii) families where piped water and a latrine were lacking; (iii) families where mothers washed their hands less often before feeding the children; (iv) families where mothers had a low level of education; (v) families where information on health and sanitation less often reached their households. | ||
T13 | 697-705 | Phenotype | denotes | pathogen | OBT:002806 | |
T14 | 733-755 | Habitat | denotes | children with diarrhea | OBT:003188|OBT:003156 | |
T15 | 767-784 | Microorganism | denotes | group A rotavirus | 28875 | |
T16 | 786-799 | Phenotype | denotes | diarrheagenic | OBT:002806 | |
T17 | 800-816 | Microorganism | denotes | Escherichia coli | 562 | |
T18 | 818-830 | Microorganism | denotes | Shigella spp | 620 | |
T19 | 836-851 | Phenotype | denotes | enterotoxigenic | OBT:002806 | |
T20 | 852-872 | Microorganism | denotes | Bacteroides fragilis | 817 | |
T21 | 941-955 | Microorganism | denotes | Salmonella spp | 590 | |
T22 | 959-974 | Microorganism | denotes | Vibrio cholerae | 666 | |
T23 | 990-999 | Microorganism | denotes | Rotavirus | 10912 | |
T24 | 1004-1017 | Phenotype | denotes | diarrheagenic | OBT:002806 | |
T25 | 1018-1025 | Microorganism | denotes | E. coli | 562 | |
T26 | 1046-1081 | Habitat | denotes | children less than two years of age | OBT:003156|OBT:003184 | |
T27 | 1089-1101 | Microorganism | denotes | Shigella spp | 620 | |
T28 | 1107-1122 | Phenotype | denotes | enterotoxigenic | OBT:002806 | |
T29 | 1123-1134 | Microorganism | denotes | B. fragilis | 817 | |
T30 | 1159-1173 | Habitat | denotes | older children | OBT:003156|OBT:003188 | |
T31 | 1175-1188 | Phenotype | denotes | Diarrheagenic | OBT:002806 | |
T32 | 1189-1196 | Microorganism | denotes | E. coli | 562 | |
T33 | 1201-1213 | Microorganism | denotes | Shigella spp | 620 | |
T35 | 1240-1264 | Phenotype | denotes | resistance to ampicillin | OBT:002762 | |
T36-0 | 1240-1253 | _FRAGMENT | denotes | resistance to | OBT:002772 | |
T36-1 | 1266-1281 | Phenotype | denotes | chloramphenicol | ||
T34-0 | 1240-1253 | _FRAGMENT | denotes | resistance to | OBT:002844 | |
T34-1 | 1290-1319 | Phenotype | denotes | trimethoprim/sulfamethoxazole | ||
T37 | 1321-1353 | Habitat | denotes | Children attending the hospitals | OBT:003269|OBT:003188 | |
T38 | 1344-1353 | Habitat | denotes | hospitals | OBT:002714 | |
T39 | 1416-1428 | Habitat | denotes | Watery stool | OBT:001102 | |
T40 | 1485-1497 | Habitat | denotes | mucous stool | OBT:001102 | |
T41 | 1485-1491 | Habitat | denotes | mucous | OBT:001220 | |
T42 | 1528-1534 | Habitat | denotes | stools | OBT:001102 | |
T43 | 1604-1613 | Habitat | denotes | hospitals | OBT:002714 | |
T44 | 1631-1639 | Habitat | denotes | children | OBT:003188|OBT:003269 | |
T45 | 1682-1690 | Habitat | denotes | children | OBT:003188|OBT:003269 | |
T46 | 1746-1757 | Habitat | denotes | piped water | OBT:001530 | |
T47 | 1764-1771 | Habitat | denotes | latrine | OBT:000702 | |
T48 | 1807-1814 | Habitat | denotes | mothers | OBT:003491 | |
T49 | 1864-1872 | Habitat | denotes | children | OBT:003188|OBT:003269 | |
T50 | 1894-1901 | Habitat | denotes | mothers | OBT:003491 | |
T5 | 2025-2431 | Paragraph | denotes | Group A rotavirus, diarrheagenic Escherichia coli, Shigella spp, and enterotoxigenic Bacteroides fragilis play an important role in causing diarrhea in children in Hanoi, Vietnam. Epidemiological factors such as lack of fresh water supply, unhygienic septic tank, low family income, lack of health information, and low educational level of parents could contribute to the morbidity of diarrhea in children. | ||
T51 | 2025-2042 | Microorganism | denotes | Group A rotavirus | 28875 | |
T52 | 2044-2057 | Phenotype | denotes | diarrheagenic | OBT:002806 | |
T53 | 2058-2074 | Microorganism | denotes | Escherichia coli | 562 | |
T54 | 2076-2088 | Microorganism | denotes | Shigella spp | 620 | |
T55 | 2094-2109 | Phenotype | denotes | enterotoxigenic | OBT:002806 | |
T56 | 2110-2130 | Microorganism | denotes | Bacteroides fragilis | 817 | |
T57 | 2177-2185 | Habitat | denotes | children | OBT:003188 | |
T59 | 2245-2263 | Habitat | denotes | fresh water supply | OBT:001082 | |
T58 | 2245-2256 | Habitat | denotes | fresh water | OBT:002455 | |
T60 | 2265-2287 | Habitat | denotes | unhygienic septic tank | OBT:003116 | |
T61 | 2422-2430 | Habitat | denotes | children | OBT:003188 | |
E1 | 767-784 | Lives_In | denotes | group A rotavirus | ||
E2 | 800-816 | Lives_In | denotes | Escherichia coli | ||
E3 | 800-816 | Exhibits | denotes | Escherichia coli | ||
E4 | 818-830 | Lives_In | denotes | Shigella spp | ||
E5 | 852-872 | Lives_In | denotes | Bacteroides fragilis | ||
E6 | 852-872 | Exhibits | denotes | Bacteroides fragilis | ||
E7 | 990-999 | Lives_In | denotes | Rotavirus | ||
E8 | 1018-1025 | Lives_In | denotes | E. coli | ||
E9 | 1018-1025 | Exhibits | denotes | E. coli | ||
E10 | 1089-1101 | Lives_In | denotes | Shigella spp | ||
E11 | 1123-1134 | Lives_In | denotes | B. fragilis | ||
E12 | 1123-1134 | Exhibits | denotes | B. fragilis | ||
E13 | 1189-1196 | Exhibits | denotes | E. coli | ||
E14 | 1189-1196 | Exhibits | denotes | E. coli | ||
E15 | 1189-1196 | Exhibits | denotes | E. coli | ||
E16 | 1189-1196 | Exhibits | denotes | E. coli | ||
E17 | 1201-1213 | Exhibits | denotes | Shigella spp | ||
E18 | 1201-1213 | Exhibits | denotes | Shigella spp | ||
E19 | 1201-1213 | Exhibits | denotes | Shigella spp | ||
E21 | 2025-2042 | Lives_In | denotes | Group A rotavirus | ||
E25 | 2058-2074 | Lives_In | denotes | Escherichia coli | ||
E26 | 2058-2074 | Exhibits | denotes | Escherichia coli | ||
E27 | 2076-2088 | Lives_In | denotes | Shigella spp | ||
E32 | 2110-2130 | Lives_In | denotes | Bacteroides fragilis | ||
E33 | 2110-2130 | Exhibits | denotes | Bacteroides fragilis | ||
R1 | E1 | T15 | Microorganism | group A rotavirus,group A rotavirus | ||
R2 | E1 | T14 | Location | group A rotavirus,children with diarrhea | ||
R3 | E2 | T17 | Microorganism | Escherichia coli,Escherichia coli | ||
R4 | E2 | T14 | Location | Escherichia coli,children with diarrhea | ||
R5 | E3 | T17 | Microorganism | Escherichia coli,Escherichia coli | ||
R6 | E3 | T16 | Property | Escherichia coli,diarrheagenic | ||
R7 | E4 | T18 | Microorganism | Shigella spp,Shigella spp | ||
R8 | E4 | T14 | Location | Shigella spp,children with diarrhea | ||
R9 | E5 | T20 | Microorganism | Bacteroides fragilis,Bacteroides fragilis | ||
R10 | E5 | T14 | Location | Bacteroides fragilis,children with diarrhea | ||
R11 | E6 | T20 | Microorganism | Bacteroides fragilis,Bacteroides fragilis | ||
R12 | E6 | T19 | Property | Bacteroides fragilis,enterotoxigenic | ||
R13 | E7 | T23 | Microorganism | Rotavirus,Rotavirus | ||
R14 | E7 | T26 | Location | Rotavirus,children less than two years of age | ||
R15 | E8 | T25 | Microorganism | E. coli,E. coli | ||
R16 | E8 | T26 | Location | E. coli,children less than two years of age | ||
R17 | E9 | T25 | Microorganism | E. coli,E. coli | ||
R18 | E9 | T24 | Property | E. coli,diarrheagenic | ||
R19 | E10 | T27 | Microorganism | Shigella spp,Shigella spp | ||
R20 | E10 | T30 | Location | Shigella spp,older children | ||
R21 | E11 | T29 | Microorganism | B. fragilis,B. fragilis | ||
R22 | E11 | T30 | Location | B. fragilis,older children | ||
R23 | E12 | T29 | Microorganism | B. fragilis,B. fragilis | ||
R24 | E12 | T28 | Property | B. fragilis,enterotoxigenic | ||
R25 | E13 | T32 | Microorganism | E. coli,E. coli | ||
R26 | E13 | T36-0 | Property | E. coli,resistance to | ||
R27 | E14 | T32 | Microorganism | E. coli,E. coli | ||
R28 | E14 | T35 | Property | E. coli,resistance to ampicillin | ||
R29 | E15 | T32 | Microorganism | E. coli,E. coli | ||
R30 | E15 | T31 | Property | E. coli,Diarrheagenic | ||
R31 | E16 | T32 | Microorganism | E. coli,E. coli | ||
R32 | E16 | T34-0 | Property | E. coli,resistance to | ||
R33 | E17 | T33 | Microorganism | Shigella spp,Shigella spp | ||
R34 | E17 | T34-0 | Property | Shigella spp,resistance to | ||
R35 | E18 | T33 | Microorganism | Shigella spp,Shigella spp | ||
R36 | E18 | T35 | Property | Shigella spp,resistance to ampicillin | ||
R37 | E19 | T33 | Microorganism | Shigella spp,Shigella spp | ||
R38 | E19 | T36-0 | Property | Shigella spp,resistance to | ||
R39 | E21 | T51 | Microorganism | Group A rotavirus,Group A rotavirus | ||
R40 | E21 | T57 | Location | Group A rotavirus,children | ||
R41 | E25 | T53 | Microorganism | Escherichia coli,Escherichia coli | ||
R42 | E25 | T57 | Location | Escherichia coli,children | ||
R43 | E26 | T53 | Microorganism | Escherichia coli,Escherichia coli | ||
R44 | E26 | T52 | Property | Escherichia coli,diarrheagenic | ||
R45 | E27 | T54 | Microorganism | Shigella spp,Shigella spp | ||
R46 | E27 | T57 | Location | Shigella spp,children | ||
R47 | E32 | T56 | Microorganism | Bacteroides fragilis,Bacteroides fragilis | ||
R48 | E32 | T57 | Location | Bacteroides fragilis,children | ||
R49 | E33 | T56 | Microorganism | Bacteroides fragilis,Bacteroides fragilis | ||
R50 | E33 | T55 | Property | Bacteroides fragilis,enterotoxigenic | ||
C-T36-0 | T36-1 | T36-0 | _lexicallyChainedTo | chloramphenicol,resistance to | ||
C-T34-0 | T34-1 | T34-0 | _lexicallyChainedTo | trimethoprim/sulfamethoxazole,resistance to |