> top > users > Jin-Dong Kim

User 'Jin-Dong Kim'

Projects

NameTDescription# Ann.Updated at Status
1-10 / 46 show all
CHEMDNER-training-testThe training subset of the CHEMDNER corpus29.4 K2015-03-23Testing
BioASQ-samplecollection of PubMed articles which appear in the BioASQ sample data set.02015-10-13Testing
CRAFT-treebankPenn Treebank markup for each sentence of the Colorado Richly Annotated Full Text Corpus (CRAFT).844 K2015-11-19Beta
pubtator-sampleSample annotation of PubTator produced by Zhiyong Lu et al.282016-01-19Testing
DisGeNETDisease-Gene association annotation.3.12 M2016-01-28Beta
GlycoBiology-FMAFMA ontology-based annotation to GlycoBiology abstracts96.3 K2016-01-31Testing
uniprot-humanUniprot proteins for human21.9 K2016-04-25Testing
uniprot-mouseProtein annotation based on UniProt11.5 K2016-04-27Developing
GO-CCAnnotation for cellular components as defined in the "Cellular Component" subtree of Gene Ontology17.6 K2016-05-03Developing
GO-MFAnnotation for molecular functions as defined in the "Molecular Function" subtree of Gene Ontology19.7 K2016-05-03Testing

Automatic annotators

NameDescription
1-7 / 7
TextSentencersentence segmentation
EnjuParserEnju HPSG Parser developed by University of Tokyo.
PD-UBERON-AE-BIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. It used the default threshold, 0.85. It uses the batch mode annotation, and may be used for annotation to a large amount of documents.
PD-GlycoGenes-B
PD-Preeclampsia-B
PD-UBERON-AEIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. Threshold is set to 0.85.
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'

Editors

NameDescription
1-2 / 2
TextAE-DevIt is a development version of TextAE. While this version has richer features, there is a chance of some bugs.
TextAEIt is a "Text Annotation Editor" developed by DBCLS. It is developed as a model implementation of PubAnnotation-interoperable viewer/editor.