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User 'Jin-Dong Kim'

Collections

NameDescriptionUpdated at
1-3 / 3
GlycoBiologyAnnotations made to the titles and abstracts of the journal 'GlycoBiology'2019-03-10
PreeclampsiaPreeclampsia-related annotations for text mining2019-03-10
bionlp-st-ge-2016The 2016 edition of the Genia event extraction (GE) task organized within BioNLP-ST 20162019-03-11

Projects

NameTDescription# Ann. Updated atStatus
1-10 / 48 show all
PubMed-2010abstracts published in 201002017-09-01
PubCasesCollectionabstracts in PubCases02017-09-08
PubMed-2000abstracts published in 2000.02017-09-01Developing
PubMed-2017abstracts published in 2017.02017-09-01Developing
GlycoBiology-GOGO-based annotation to GlycoBiology abstracts02016-06-11Testing
pubmed-2016abstracts published in 201602017-09-03
BioASQ-samplecollection of PubMed articles which appear in the BioASQ sample data set.02015-10-13Testing
GlycoConjugate-collectionThe PubMed entries (titles and abstracts) from the journal of GlycoConjugate02018-02-09Developing
tutorial152017-01-17Testing
example2122017-02-21Testing

Automatic annotators

NameDescription
1-10 / 15 show all
TextSentencersentence segmentation
EnjuParserEnju HPSG Parser developed by University of Tokyo.
PD-UBERON-AE-BIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. It used the default threshold, 0.85. It uses the batch mode annotation, and may be used for annotation to a large amount of documents.
PD-GlycoGenes-B
PD-Preeclampsia-B
PD-UBERON-AEIt annotates for anatomical entities, based on the UBERON-AE dictionary on PubDictionaries. Threshold is set to 0.85.
PD-GlycoEpitope-BA batch annotator using PubDictionaries with the dictionary 'GlycoEpitope'
PubTator-ChemicalTo pull the pre-computed chemical annotation from PubTator.
PubTator-GeneTo pull the pre-computed gene annotation from PubTator.
PubTator-SpeciesTo pull the pre-computed Species annotation from PubTator.

Editors

NameDescription
1-2 / 2
TextAE-DevIt is a development version of TextAE. While this version has richer features, there is a chance of some bugs.
TextAEIt is a "Text Annotation Editor" developed by DBCLS. It is developed as a model implementation of PubAnnotation-interoperable viewer/editor.