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NameTDescription# Ann.AuthorMaintainerUpdated_atStatus

81-100 / 511 show all
LitCovid-sample-PD-IDO 1.27 KJin-Dong Kim2021-01-14Beta
LitCovid-sample-PD-UBERON PubDictionaries annotation for UBERON terms - updated at 2020-04-30 It is annotation for anatomical entities based on Uberon. The terms in Uberon are uploaded in PubDictionaries (Uberon), with which the annotations in this project are produced. The parameter configuration used for this project is here. Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. 310Jin-Dong Kim2021-01-14Beta
LitCovid-sample-PD-NCBITaxon 1.35 KJin-Dong Kim2021-01-14Beta
LitCovid-sample-PD-GO-BP-0 708Jin-Dong Kim2021-01-16Beta
consensus_PMA_Age_Indications 1.7 Klaurenc2021-02-07Beta
NEUROSES This corpus is composed of PubMed articles containing cognitive enhancers and anti-depressants drug mentions. The selected sentences are automatically annotated using the NCBO Annotator with the Chemical Entities of Biological Interest (CHEBI) and Phenotypic Quality Ontology (PATO) ontologies, we also produced annotations using PhenoMiner ontology via a dictionary-based tagger.2.14 Mnestoralvaro2021-03-10Beta
Ab3P-abbreviations This corpus was developed during the creation of the Ab3P abbreviation definition identification tool. It includes 1250 manually annotated MEDLINE records. This gold standard includes 1221 abbreviation-definition pairs. Abbreviation definition identification based on automatic precision estimates Sunghwan Sohn, Donald C Comeau, Won Kim and W John Wilbur BMC Bioinformatics20089:402 DOI: 10.1186/1471-2105-9-4022.33 KSunghwan Sohn, Donald C Comeau, Won Kim and W John Wilburcomeau2021-03-10Beta
QFMC_MEDLINE Quaero French Medical Corpus: Annotation of MEDLINE titles5.9 KAurélie NévéolPierre Zweigenbaum2021-03-10Beta
LitCovid_Glycan-Motif-Structure PubDictionaries annotation for glycan-Motif terms.6.51 KISSAKU YAMADA2021-03-10Beta
PubCasesORDO ORDO annotation in PubCases865 KToyofumi Fujiwara2021-03-11Beta
PubCasesHPO HPO annotation in PubCases3.18 MToyofumi Fujiwara2021-03-11Beta
PubmedHPO Human phenotype annotation to PubMed abstracts, based on the HPO ontology12.4 MTudor Grozatudor2021-03-11Beta
DisGeNET Disease-Gene association annotation.3.12 MNuria Queralt Jin-Dong Kim2021-03-11Beta
LitCovid-PubTator 5.88 MJin-Dong Kim2021-06-06Beta
LitCovid-PD-HP 922 KJin-Dong Kim2021-06-19Beta
sonoma2 sonoma29.09 KStandigmchanung2021-10-03Beta
IMDB-NLP Annotations for chunking and semantic role labeling based on in-memory databases.02016-05-06Uploading
CoGe_Citation_Annotations Annotated PMC abstracts+full articles, that cite the "CoGe" papers (PMID: 18952863, 18269575). Total Num Citations: 165 Total Num Unique Citations: 141 Total Num Abstracts: 165 Total Num Whole Articles: 165 0Heather Lenthclent2016-10-11Uploading
OryzaGP1 A dataset for Named Entity Recognition for rice gene0Huy Do. Pierre Larmande2019-01-31Uploading
FA_Top100Plus-GeneProtein Top100+本来Top100に入るべきだった7レビューの計、107レビュー中101レビュー。 5414, 6076, 6930, 8403, 9643, 18544は、0denotationでドキュメント自体登録していない。 attributesの詳細はconfig参照。 ドキュメントのソースDBが@AikoHIRAKIとなっているものはTypo修正がPubAnnotationの公式FirstAuthorsドキュメントに反映された段階で置き換えます。 10.4 Kyucca2020-09-14Uploading
NameT# Ann.AuthorMaintainerUpdated_atStatus

81-100 / 511 show all
LitCovid-sample-PD-IDO 1.27 KJin-Dong Kim2021-01-14Beta
LitCovid-sample-PD-UBERON 310Jin-Dong Kim2021-01-14Beta
LitCovid-sample-PD-NCBITaxon 1.35 KJin-Dong Kim2021-01-14Beta
LitCovid-sample-PD-GO-BP-0 708Jin-Dong Kim2021-01-16Beta
consensus_PMA_Age_Indications 1.7 Klaurenc2021-02-07Beta
NEUROSES 2.14 Mnestoralvaro2021-03-10Beta
Ab3P-abbreviations 2.33 KSunghwan Sohn, Donald C Comeau, Won Kim and W John Wilburcomeau2021-03-10Beta
QFMC_MEDLINE 5.9 KAurélie NévéolPierre Zweigenbaum2021-03-10Beta
LitCovid_Glycan-Motif-Structure 6.51 KISSAKU YAMADA2021-03-10Beta
PubCasesORDO 865 KToyofumi Fujiwara2021-03-11Beta
PubCasesHPO 3.18 MToyofumi Fujiwara2021-03-11Beta
PubmedHPO 12.4 MTudor Grozatudor2021-03-11Beta
DisGeNET 3.12 MNuria Queralt Jin-Dong Kim2021-03-11Beta
LitCovid-PubTator 5.88 MJin-Dong Kim2021-06-06Beta
LitCovid-PD-HP 922 KJin-Dong Kim2021-06-19Beta
sonoma2 9.09 KStandigmchanung2021-10-03Beta
IMDB-NLP 02016-05-06Uploading
CoGe_Citation_Annotations 0Heather Lenthclent2016-10-11Uploading
OryzaGP1 0Huy Do. Pierre Larmande2019-01-31Uploading
FA_Top100Plus-GeneProtein 10.4 Kyucca2020-09-14Uploading