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NameTDescription# Ann.AuthorMaintainerUpdated_atStatus

61-80 / 359 すべて表示
CORD-19_Non-commercial_use_subsetThe Non commercial use subset of the CORD-19 dataset. The documents in this project will be updated as the CORD-19 dataset grows. See the COVID DATASET LICENSE AGREEMENT.0Jin-Dong Kim2020-03-23公開中
LitCovid-ArguminSciDiscourse elements for the documents in the LitCovid dataset. Annotations were automatically predicted by the ArguminSci tool (https://github.com/anlausch/ArguminSci)4.9 Kzebet2020-03-25公開中
PubMed_Structured_AbstractsSections (zones) as retrieved from PubMed.1.64 Kzebet2020-03-31公開中
PubMed_ArguminSciPredictions for PubMed automatically extracted with the ArguminSci tool (https://github.com/anlausch/ArguminSci).15.3 Kzebet2020-03-31公開中
LitCovid-PubTatorCentralNamed-entities for the documents in the LitCovid dataset. Annotations were automatically predicted by the PubTatorCentral tool (https://www.ncbi.nlm.nih.gov/research/pubtator/)4.64 Kzebet2020-04-01公開中
LitCovid-OGERUsing OGER (http://www.ontogene.org/resources/oger) to detect entities from 10 different vocabularies9.31 KFabio RinaldiNico Colic2020-04-02公開中
LitCovid-OGER-BioBertUsing OGER (http://www.ontogene.org/resources/oger) in conjunction with BioBert as described here (https://arxiv.org/pdf/2003.07424.pdf)4.03 KFabio RinaldiNico Colic2020-04-02公開中
DisGeNETDisease-Gene association annotation.3.12 MNuria Queralt Jin-Dong Kim2016-01-28ベータ
NEUROSESThis corpus is composed of PubMed articles containing cognitive enhancers and anti-depressants drug mentions. The selected sentences are automatically annotated using the NCBO Annotator with the Chemical Entities of Biological Interest (CHEBI) and Phenotypic Quality Ontology (PATO) ontologies, we also produced annotations using PhenoMiner ontology via a dictionary-based tagger.2.15 Mnestoralvaro2016-02-24ベータ
bionlp-st-ge-2016-uniprotUniProt protein annotation to the benchmark data set of BioNLP-ST 2016 GE task: reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test). The annotations are produced based on a dictionary which is semi-automatically compiled for the 34 full paper articles included in the benchmark data set (20 in the reference data set + 14 in the test data set). For detailed information about BioNLP-ST GE 2016 task data sets, please refer to the benchmark reference data set (bionlp-st-ge-2016-reference) and benchmark test data set (bionlp-st-ge-2016-test). 16.2 KDBCLSJin-Dong Kim2016-05-22ベータ
Ab3P-abbreviationsThis corpus was developed during the creation of the Ab3P abbreviation definition identification tool. It includes 1250 manually annotated MEDLINE records. This gold standard includes 1221 abbreviation-definition pairs. Abbreviation definition identification based on automatic precision estimates Sunghwan Sohn, Donald C Comeau, Won Kim and W John Wilbur BMC Bioinformatics20089:402 DOI: 10.1186/1471-2105-9-4022.34 KSunghwan Sohn, Donald C Comeau, Won Kim and W John Wilburcomeau2016-07-29ベータ
PubCasesHPOHPO annotation in PubCases3.2 MToyofumi Fujiwara2017-09-06ベータ
PubCasesORDOORDO annotation in PubCases869 KToyofumi Fujiwara2017-09-14ベータ
QFMC_MEDLINEQuaero French Medical Corpus: Annotation of MEDLINE titles5.97 KAurélie NévéolPierre Zweigenbaum2018-01-24ベータ
Genomics_InformaticsGenomics & Informatics (NLM title abbreviation: Genomics Inform) is the official journal of the Korea Genome Organization. Text corpus for this journal annotated with various levels of linguistic information would be a valuable resource as the process of information extraction requires syntactic, semantic, and higher levels of natural language processing. In this study, we publish our new corpus called GNI Corpus version 1.0, extracted and annotated from full texts of Genomics & Informatics, with NLTK (Natural Language ToolKit)-based text mining script. The preliminary version of the corpus could be used as a training and testing set of a system that serves a variety of functions for future biomedical text mining.35.3 KHyun-Seok Parkewha-bio2018-11-27ベータ
blah6_medical_deviceBLAH6 hackathon project to annotate medical device indications in premarket approval statement summaries. The documents in this project serve as a corpus of premarket approval (PMA) statements that have undergone quality control. In particular, we have (1) removed non-ascii characters, (2) fixed some text segmentation errors, and (3) fixed some capitalization errors.0Stefano Rensitherightstef2020-02-13ベータ
LitCovid-PAS-EnjuPredicate-argument structure annotation produced by the Enju parser.125 KJin-Dong Kim2020-03-25ベータ
PubmedHPOHuman phenotype annotation to PubMed abstracts, based on the HPO ontology12.4 MTudor Grozatudor2020-04-01ベータ
IMDB-NLPAnnotations for chunking and semantic role labeling based on in-memory databases.02016-05-06アップロード中
AnEM_full-texts250 documents selected randomly from full-text papers Entity types: organism subdivision, anatomical system, organ, multi-tissue structure, tissue, cell, developing anatomical structure, cellular component, organism substance, immaterial anatomical entity and pathological formation Together with AnEM_abstracts, it is probably the largest manually annotated corpus on anatomical entities.689NaCTeMYue Wang2016-07-27アップロード中
NameT# Ann.AuthorMaintainerUpdated_atStatus

61-80 / 359 すべて表示
CORD-19_Non-commercial_use_subset0Jin-Dong Kim2020-03-23公開中
LitCovid-ArguminSci4.9 Kzebet2020-03-25公開中
PubMed_Structured_Abstracts1.64 Kzebet2020-03-31公開中
PubMed_ArguminSci15.3 Kzebet2020-03-31公開中
LitCovid-PubTatorCentral4.64 Kzebet2020-04-01公開中
LitCovid-OGER9.31 KFabio RinaldiNico Colic2020-04-02公開中
LitCovid-OGER-BioBert4.03 KFabio RinaldiNico Colic2020-04-02公開中
DisGeNET3.12 MNuria Queralt Jin-Dong Kim2016-01-28ベータ
NEUROSES2.15 Mnestoralvaro2016-02-24ベータ
bionlp-st-ge-2016-uniprot16.2 KDBCLSJin-Dong Kim2016-05-22ベータ
Ab3P-abbreviations2.34 KSunghwan Sohn, Donald C Comeau, Won Kim and W John Wilburcomeau2016-07-29ベータ
PubCasesHPO3.2 MToyofumi Fujiwara2017-09-06ベータ
PubCasesORDO869 KToyofumi Fujiwara2017-09-14ベータ
QFMC_MEDLINE5.97 KAurélie NévéolPierre Zweigenbaum2018-01-24ベータ
Genomics_Informatics35.3 KHyun-Seok Parkewha-bio2018-11-27ベータ
blah6_medical_device0Stefano Rensitherightstef2020-02-13ベータ
LitCovid-PAS-Enju125 KJin-Dong Kim2020-03-25ベータ
PubmedHPO12.4 MTudor Grozatudor2020-04-01ベータ
IMDB-NLP02016-05-06アップロード中
AnEM_full-texts689NaCTeMYue Wang2016-07-27アップロード中