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プロジェクト

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221-240 / 381 すべて表示
SPECIES800_autotagged This project comprises the SPECIES800 corpus documents automatically annotated by the Jensenlab tagger. Annotated entity types are: Genes/proteins from the mentioned organisms (and any human ones) PubChem Compound identifiers NCBI Taxonomy entries Gene Ontology cellular component terms BRENDA Tissue Ontology terms Disease Ontology terms Environment Ontology terms The SPECIES 800 (S800) comprises 800 PubMed abstracts. In its original form species mentions were manually identified and mapped to the corresponding NCBI Taxonomy identifiers. Described in: The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text. Pafilis E, Frankild SP, Fanini L, Faulwetter S, Pavloudi C, et al. (2013). PLoS ONE, 2013, 8(6): e65390. doi:10.1371/journal.pone.0065390. The manually annotated corpus is also available as a PubAnnotation project (see here). 0Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensenevangelos2015-11-20テスト中
bionlp-st-gro-2013-training The training data set of the BioNLP-ST 2013 GRO task, including 150 MEDLINE abstracts that are annotated with concepts and relations of the Gene Regulation Ontology (GRO; http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html)8.02 KJung-jae KimJung-jae Kim2016-01-08テスト中
bionlp-st-gro-2013-development The development data set of the BioNLP-ST 2013 GRO task, including 50 MEDLINE abstracts that are annotated with concepts and relations of the Gene Regulation Ontology (GRO; http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html)2.66 KJung-jae KimJung-jae Kim2016-01-08テスト中
pubtator-sample Sample annotation of PubTator produced by Zhiyong Lu et al.28Zhiyong LuJin-Dong Kim2016-01-19テスト中
GlycoBiology-PACDB cGGDB-based annotation to GlycoBiology abstracts3.03 KToshihide Shikanaishikanai2016-02-01テスト中
GlycoBiology-GDGDB GDGDB-based annotation to GlycoBiology abstracts 2.46 KToshihide Shikanaishikanai2016-02-01テスト中
GlycoBiology-cGGDB cGGDB-based annotation to GlycoBiology abstracts36Toshihide Shikanaishikanai2016-02-01テスト中
Glycobiology-GlycanName 946Toshihide Shikanaishikanai2016-04-06テスト中
Test_PubTator 62Chih-Hsuan Wei2016-04-20テスト中
GlycoBiology-NCBITAXON NCBITAXON-based annotation to GlycoBiology abstracts32.7 Kshuo502016-05-10テスト中
namedentityrecognition 0white2016-05-13テスト中
GlycoBiology-GO GO-based annotation to GlycoBiology abstracts0Jin-Dong Kim2016-06-11テスト中
test-create-project 0yucca2016-06-22テスト中
EDAM-DFO annotation for EDAM terms for data, formats, and operations12.5 KJin-Dong Kim2016-09-21テスト中
EDAM-topics annotation for EDAM topics11.6 KJin-Dong Kim2016-09-21テスト中
tagtog-test Test project only for tagtog submissions0tagtogtagtog2016-09-28テスト中
Testing Testing241Hyun-Seok Parkhsp202016-10-27テスト中
parkinson parkinson's disease 1.55 KKyungeunKyungeun2016-10-27テスト中
metamap-sample Sample annotation of MetaMep, produced by Aronson, et al. An overview of MetaMap: historical perspective and recent advances, JAMIA 201010.9 KAlan R AronsonJin-Dong Kim2016-12-19テスト中
tutorial1 5Jin-Dong Kim2017-01-17テスト中
NameT# Ann.AuthorMaintainerUpdated_atStatus

221-240 / 381 すべて表示
SPECIES800_autotagged 0Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensenevangelos2015-11-20テスト中
bionlp-st-gro-2013-training 8.02 KJung-jae KimJung-jae Kim2016-01-08テスト中
bionlp-st-gro-2013-development 2.66 KJung-jae KimJung-jae Kim2016-01-08テスト中
pubtator-sample 28Zhiyong LuJin-Dong Kim2016-01-19テスト中
GlycoBiology-PACDB 3.03 KToshihide Shikanaishikanai2016-02-01テスト中
GlycoBiology-GDGDB 2.46 KToshihide Shikanaishikanai2016-02-01テスト中
GlycoBiology-cGGDB 36Toshihide Shikanaishikanai2016-02-01テスト中
Glycobiology-GlycanName 946Toshihide Shikanaishikanai2016-04-06テスト中
Test_PubTator 62Chih-Hsuan Wei2016-04-20テスト中
GlycoBiology-NCBITAXON 32.7 Kshuo502016-05-10テスト中
namedentityrecognition 0white2016-05-13テスト中
GlycoBiology-GO 0Jin-Dong Kim2016-06-11テスト中
test-create-project 0yucca2016-06-22テスト中
EDAM-DFO 12.5 KJin-Dong Kim2016-09-21テスト中
EDAM-topics 11.6 KJin-Dong Kim2016-09-21テスト中
tagtog-test 0tagtogtagtog2016-09-28テスト中
Testing 241Hyun-Seok Parkhsp202016-10-27テスト中
parkinson 1.55 KKyungeunKyungeun2016-10-27テスト中
metamap-sample 10.9 KAlan R AronsonJin-Dong Kim2016-12-19テスト中
tutorial1 5Jin-Dong Kim2017-01-17テスト中