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NameTDescription # Ann.AuthorMaintainerUpdated_atStatus

341-360 / 556 show all
PT_NER_NEL Annotations in Portuguese COVID-19 related abstracts from MeSH terminology245LASIGE-DeSTpruas_182023-11-29Developing
LitCoin-Disease-Tuning-1 Annotator=PD-MeSH2022_C_F03_plus_allFN-B6.98 Kyucca2023-11-29
performance-test a project for performance test480 KJin-Dong Kim2023-11-27Testing
GlyCosmos600-docs A random collection of 600 PubMed abstracts from 6 glycobiology-related journals: Glycobiology, Glycoconjugate journal, The Journal of biological chemistry, Journal of proteome research, Journal of proteomics, and Carbohydrate research. The whole PMIDs were collected on June 11, 2019. From each journal, 100 PMIDs were randomly sampled.0Jin-Dong Kim2023-11-29Released
LitCovid-GlycoBiology Articles from GlycoBiology, received by the keyword "Covid-19"0Jin-Dong Kim2023-11-29Testing
DocumentLevelAnnotationSample A sample project for document level annotation47Jin-Dong Kim2023-11-29Testing
ASCO_abstracts asco abstracts sample dataset28 Kalo332023-11-29Testing
LitCoin-PubTator-for-Tuning A set of randomly selected PubMed articles with PubTator annotation. The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows: 'Gene' -> 'GeneOrGeneProduct', 'Disease' -> 'DiseaseOrPhenotypicFeature', 'Chemical' -> 'ChemicalEntity' 'Species' -> 'OrganismTaxon' 'Mutation' -> 'SequenceVariant' 'CellLine' -> 'CellLine'14.2 KJin-Dong Kim2023-11-29
SCAI-Test A small corpus for the evaluation of dictionaries containing chemical entities. Publication: http://www.scai.fraunhofer.de/fileadmin/images/bio/data_mining/paper/kolarik2008.pdf Original source: https://www.scai.fraunhofer.de/en/business-research-areas/bioinformatics/downloads/corpora-for-chemical-entity-recognition.html1.21 KCALBC ProjectYue Wang2023-11-28Released
JF-test A test corpus for exploring this service9Johan Fridjohanf2023-12-03Testing
GlyCosmos6-Glycan-Motif-Structure Automatic annotation by Covid-19_Glycan-Motif.107 KJin-Dong Kim2023-11-24Developing
GlyCosmos6-CLO Automatic annotation by PC-CLO.1.18 MJin-Dong Kim2023-11-24Developing
Glycosmos6-GlycoEpitope Automatic annotation by PD-GlycoEpitope.19.9 KJin-Dong Kim2023-11-28Developing
Glycosmos6-MAT Automatic annotation by PD-MAT.263 KJin-Dong Kim2023-11-29Developing
CORD-PICO Automatic annotation of the CORD-19 dataset with PICO categories. The corpus was automatically labeled with an LSTM-CRF model trained on human-annotated PubMed abstracts from https://github.com/bepnye/EBM-NLP. Currently, titles and abstracts only are annotated using Population, Intervention and Outcome labels, as well as more fine-grained labels such as Age, Drug, Mortality and others.69.6 KSimon Susterssuster2023-11-27Developing
blah6_medical_device BLAH6 hackathon project to annotate medical device indications in premarket approval statement summaries. The documents in this project serve as a corpus of premarket approval (PMA) statements that have undergone quality control. In particular, we have (1) removed non-ascii characters, (2) fixed some text segmentation errors, and (3) fixed some capitalization errors.0Stefano Rensitherightstef2023-11-29Beta
CellFinder CellFinder corpus4.75 KMariana Neves, Alexander Damaschun, Andreas Kurtz, Ulf LeserMariana Neves2023-11-27Released
LitCoin_CellLine CellLine113Yasunori Yamamoto2023-11-29Developing
GlycoBiology-PACDB cGGDB-based annotation to GlycoBiology abstracts3.03 KToshihide Shikanaishikanai2023-11-27Testing
GlycoBiology-cGGDB cGGDB-based annotation to GlycoBiology abstracts36Toshihide Shikanaishikanai2023-11-28Testing
NameT# Ann.AuthorMaintainerUpdated_atStatus

341-360 / 556 show all
PT_NER_NEL 245LASIGE-DeSTpruas_182023-11-29Developing
LitCoin-Disease-Tuning-1 6.98 Kyucca2023-11-29
performance-test 480 KJin-Dong Kim2023-11-27Testing
GlyCosmos600-docs 0Jin-Dong Kim2023-11-29Released
LitCovid-GlycoBiology 0Jin-Dong Kim2023-11-29Testing
DocumentLevelAnnotationSample 47Jin-Dong Kim2023-11-29Testing
ASCO_abstracts 28 Kalo332023-11-29Testing
LitCoin-PubTator-for-Tuning 14.2 KJin-Dong Kim2023-11-29
SCAI-Test 1.21 KCALBC ProjectYue Wang2023-11-28Released
JF-test 9Johan Fridjohanf2023-12-03Testing
GlyCosmos6-Glycan-Motif-Structure 107 KJin-Dong Kim2023-11-24Developing
GlyCosmos6-CLO 1.18 MJin-Dong Kim2023-11-24Developing
Glycosmos6-GlycoEpitope 19.9 KJin-Dong Kim2023-11-28Developing
Glycosmos6-MAT 263 KJin-Dong Kim2023-11-29Developing
CORD-PICO 69.6 KSimon Susterssuster2023-11-27Developing
blah6_medical_device 0Stefano Rensitherightstef2023-11-29Beta
CellFinder 4.75 KMariana Neves, Alexander Damaschun, Andreas Kurtz, Ulf LeserMariana Neves2023-11-27Released
LitCoin_CellLine 113Yasunori Yamamoto2023-11-29Developing
GlycoBiology-PACDB 3.03 KToshihide Shikanaishikanai2023-11-27Testing
GlycoBiology-cGGDB 36Toshihide Shikanaishikanai2023-11-28Testing