Projects

Name	Description	# Ann.	Author	Maintainer	Updated_at	Status

« 1 2 3 4 5 6 7 ... 27 28 » 41-60 / 556 show all
zhou_test		0			2019-07-13	Testing
SPECIES800_autotagged	This project comprises the SPECIES800 corpus documents automatically annotated by the Jensenlab tagger. Annotated entity types are: Genes/proteins from the mentioned organisms (and any human ones) PubChem Compound identifiers NCBI Taxonomy entries Gene Ontology cellular component terms BRENDA Tissue Ontology terms Disease Ontology terms Environment Ontology terms The SPECIES 800 (S800) comprises 800 PubMed abstracts. In its original form species mentions were manually identified and mapped to the corresponding NCBI Taxonomy identifiers. Described in: The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text. Pafilis E, Frankild SP, Fanini L, Faulwetter S, Pavloudi C, et al. (2013). PLoS ONE, 2013, 8(6): e65390. doi:10.1371/journal.pone.0065390. The manually annotated corpus is also available as a PubAnnotation project (see here).	0	Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensen	evangelos	2015-11-20	Testing
ichiharatest_150825_2	test	0	ichihara_hisako	Hisako Ichihara	2015-09-11	Testing
test-integbio		0		yucca	2016-08-03
NAKLEE		0		Nakyolee	2017-07-13
Training_Data_French_fr_en		0		wmtbio	2023-11-27	Developing
Training_Data_English_ja_en		0		wmtbio	2023-11-26	Developing
bc2gn_test	test	0			2021-07-13	Testing
Trait_curation150825	Trait curation	0	Sachiko_Shirasawa	Sachiko Shirasawa	2023-11-29	Testing
Find2ER	Find the Findings of Enzymatic Reaction	0	Akihiro Kameda	Akihiro Kameda	2023-11-26	Testing
BioASQ-sample	collection of PubMed articles which appear in the BioASQ sample data set.	0	BioASQ	Jin-Dong Kim	2023-11-28	Testing
BLAH2021-glytoucan-iupac		0		kiyoko	2021-01-19
tf-test		0		Takatomo Fujisawa	2015-11-20	Testing
AGCA_Sue	Active Gene Annotation Corpus for the Application in Drug Repurposing Discovery	0	Jingbo Xia, Xuan Qin, Kaiyin Zhou		2023-11-29	Developing
zhou-1124		0		zhoukaiyin	2023-11-29
PathNERGold	Gold standard used for training PathNER	0	Chengkin Wu	nikolamilosevic	2023-11-29	Developing
test01		0		Erika Asamizu	2015-09-11	Testing
IMDB-NLP	Annotations for chunking and semantic role labeling based on in-memory databases.	0			2016-05-06	Uploading
ichiharatest_150825	test	0	ichihara_hisako	Hisako Ichihara	2023-11-29	Testing
pubmed-2016	abstracts published in 2016	0		Jin-Dong Kim	2023-11-28

Name	# Ann.	Author	Maintainer	Updated_at	Status

« 1 2 3 4 5 6 7 ... 27 28 » 41-60 / 556 show all
zhou_test	0			2019-07-13	Testing
SPECIES800_autotagged	0	Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensen	evangelos	2015-11-20	Testing
ichiharatest_150825_2	0	ichihara_hisako	Hisako Ichihara	2015-09-11	Testing
test-integbio	0		yucca	2016-08-03
NAKLEE	0		Nakyolee	2017-07-13
Training_Data_French_fr_en	0		wmtbio	2023-11-27	Developing
Training_Data_English_ja_en	0		wmtbio	2023-11-26	Developing
bc2gn_test	0			2021-07-13	Testing
Trait_curation150825	0	Sachiko_Shirasawa	Sachiko Shirasawa	2023-11-29	Testing
Find2ER	0	Akihiro Kameda	Akihiro Kameda	2023-11-26	Testing
BioASQ-sample	0	BioASQ	Jin-Dong Kim	2023-11-28	Testing
BLAH2021-glytoucan-iupac	0		kiyoko	2021-01-19
tf-test	0		Takatomo Fujisawa	2015-11-20	Testing
AGCA_Sue	0	Jingbo Xia, Xuan Qin, Kaiyin Zhou		2023-11-29	Developing
zhou-1124	0		zhoukaiyin	2023-11-29
PathNERGold	0	Chengkin Wu	nikolamilosevic	2023-11-29	Developing
test01	0		Erika Asamizu	2015-09-11	Testing
IMDB-NLP	0			2016-05-06	Uploading
ichiharatest_150825	0	ichihara_hisako	Hisako Ichihara	2023-11-29	Testing
pubmed-2016	0		Jin-Dong Kim	2023-11-28