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Projects

Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

1-20 / 238 show all
0mytest 144Yue Wang2023-11-29
2_test 145 MYue Wang2023-11-24
AGAC-COVID-19 14xiajingbo2023-11-29
AGCA_Sue Active Gene Annotation Corpus for the Application in Drug Repurposing Discovery0Jingbo Xia, Xuan Qin, Kaiyin Zhou2023-11-29Developing
Allie An annotation set of abbreviations and expanded forms extracted from PubMed/MEDLINE by machines.8.7 MDatabase Center for Life ScienceYasunori Yamamoto2023-11-24Developing
AlvisNLP-Async-Test Test for the asynchronous AlvisNLP/ML annotator family.0Robert Bossyrbossy2023-11-26Testing
AxD_symptoms Symptoms of AxD from available case report and case series401Eisuke Dohi2023-11-29Developing
bc2gn_test test02021-07-13Testing
BioASQ-sample collection of PubMed articles which appear in the BioASQ sample data set.0BioASQJin-Dong Kim2023-11-28Testing
biomarkers IL/TNF biomarkers857 Kalo332023-11-24
BioNLP16_DUT 6.5 KMessiy2023-11-29Testing
BioNLP16_Messiy 6.5 KMessiy2023-11-29Testing
bionlp-st-ge-2016-reference-eval 426Jin-Dong Kim2023-11-29Testing
bionlp-st-ge-2016-reference-tees NER and event extraction produced by TEES (with the default GE11 model) for the 20 full papers used in the BioNLP 2016 GE task reference corpus.14.6 KNico Colic Nico Colic2023-11-29Released
bionlp-st-ge-2016-spacy-parsed Dependency parses produced by spaCy parser, and part-of-speech tags produced by Stanford tagger (with the wsj-0-18-left3words-nodistsim model). The exact procedure is described here. Data set contains the 34 full paper articles used in the BioNLP 2016 GE task. 225 KNico ColicNico Colic2023-11-29Released
bionlp-st-ge-2016-test-ihmc 14.4 KLucian Galescu2023-11-29Testing
bionlp-st-ge-2016-test-tees NER and event extraction produced by TEES (with the default GE11 model) for the 14 full papers used in the BioNLP 2016 GE task test corpus.9.17 KNico ColicNico Colic2023-11-29Released
bionlp-st-ge-2016-uniprot UniProt protein annotation to the benchmark data set of BioNLP-ST 2016 GE task: reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test). The annotations are produced based on a dictionary which is semi-automatically compiled for the 34 full paper articles included in the benchmark data set (20 in the reference data set + 14 in the test data set). For detailed information about BioNLP-ST GE 2016 task data sets, please refer to the benchmark reference data set (bionlp-st-ge-2016-reference) and benchmark test data set (bionlp-st-ge-2016-test). 16.2 KDBCLSJin-Dong Kim2023-11-29Beta
biosemtest test submitting Peregrine annotations35.6 KMark Thompsonmarkthompson2023-11-29Testing
Biotea NCBO annotation on full text for PMC articles. Currently including only a small set of 2811 articles corresponding to those supporting curated diesease-protein annotation from UniProt and with machine-processable full text.894 KL. Garcia2023-11-24Developing
Name T# Ann.AuthorMaintainerUpdated_atStatus

1-20 / 238 show all
0mytest 144Yue Wang2023-11-29
2_test 145 MYue Wang2023-11-24
AGAC-COVID-19 14xiajingbo2023-11-29
AGCA_Sue 0Jingbo Xia, Xuan Qin, Kaiyin Zhou2023-11-29Developing
Allie 8.7 MDatabase Center for Life ScienceYasunori Yamamoto2023-11-24Developing
AlvisNLP-Async-Test 0Robert Bossyrbossy2023-11-26Testing
AxD_symptoms 401Eisuke Dohi2023-11-29Developing
bc2gn_test 02021-07-13Testing
BioASQ-sample 0BioASQJin-Dong Kim2023-11-28Testing
biomarkers 857 Kalo332023-11-24
BioNLP16_DUT 6.5 KMessiy2023-11-29Testing
BioNLP16_Messiy 6.5 KMessiy2023-11-29Testing
bionlp-st-ge-2016-reference-eval 426Jin-Dong Kim2023-11-29Testing
bionlp-st-ge-2016-reference-tees 14.6 KNico Colic Nico Colic2023-11-29Released
bionlp-st-ge-2016-spacy-parsed 225 KNico ColicNico Colic2023-11-29Released
bionlp-st-ge-2016-test-ihmc 14.4 KLucian Galescu2023-11-29Testing
bionlp-st-ge-2016-test-tees 9.17 KNico ColicNico Colic2023-11-29Released
bionlp-st-ge-2016-uniprot 16.2 KDBCLSJin-Dong Kim2023-11-29Beta
biosemtest 35.6 KMark Thompsonmarkthompson2023-11-29Testing
Biotea 894 KL. Garcia2023-11-24Developing