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Name TDescription# Ann.AuthorMaintainerUpdated_atStatus

1-20 / 119 show all
AGCA_Sue Active Gene Annotation Corpus for the Application in Drug Repurposing Discovery0Jingbo Xia, Xuan Qin, Kaiyin Zhou2017-11-13Developing
Allie An annotation set of abbreviations and expanded forms extracted from PubMed/MEDLINE by machines.8.7 MDatabase Center for Life ScienceYasunori Yamamoto2019-06-06Developing
AlvisNLP-Async-Test Test for the asynchronous AlvisNLP/ML annotator family.0Robert Bossyrbossy2017-04-07Testing
BioASQ-sample collection of PubMed articles which appear in the BioASQ sample data set.0BioASQJin-Dong Kim2015-10-13Testing
BioNLP16_DUT 6.5 KMessiy2017-06-01Testing
BioNLP16_Messiy 6.5 KMessiy2017-06-02Testing
bionlp-st-ge-2016-reference-eval 426Jin-Dong Kim2019-05-01Testing
bionlp-st-ge-2016-reference-tees NER and event extraction produced by TEES (with the default GE11 model) for the 20 full papers used in the BioNLP 2016 GE task reference corpus.14.6 KNico Colic Nico Colic2016-05-25Released
bionlp-st-ge-2016-spacy-parsed Dependency parses produced by spaCy parser, and part-of-speech tags produced by Stanford tagger (with the wsj-0-18-left3words-nodistsim model). The exact procedure is described here. Data set contains the 34 full paper articles used in the BioNLP 2016 GE task. 226 KNico ColicNico Colic2016-05-25Released
bionlp-st-ge-2016-test-ihmc 14.4 KLucian Galescu2016-05-15Testing
bionlp-st-ge-2016-test-tees NER and event extraction produced by TEES (with the default GE11 model) for the 14 full papers used in the BioNLP 2016 GE task test corpus.9.17 KNico ColicNico Colic2016-05-25Released
bionlp-st-ge-2016-uniprot UniProt protein annotation to the benchmark data set of BioNLP-ST 2016 GE task: reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test). The annotations are produced based on a dictionary which is semi-automatically compiled for the 34 full paper articles included in the benchmark data set (20 in the reference data set + 14 in the test data set). For detailed information about BioNLP-ST GE 2016 task data sets, please refer to the benchmark reference data set (bionlp-st-ge-2016-reference) and benchmark test data set (bionlp-st-ge-2016-test). 16.2 KDBCLSJin-Dong Kim2016-05-22Beta
biosemtest test submitting Peregrine annotations35.6 KMark Thompsonmarkthompson2015-12-17Testing
Biotea NCBO annotation on full text for PMC articles. Currently including only a small set of 2811 articles corresponding to those supporting curated diesease-protein annotation from UniProt and with machine-processable full text.895 KL. Garcia2019-03-12Developing
BLAH2015_Annotations_Adderall 0nestoralvaronestoralvaro2015-03-15Testing
CORD-19_All_docs All the documents in the whole CORD-19 dataset. The documents in this project will be updated as the CORD-19 dataset grows. See the COVID DATASET LICENSE AGREEMENT.0Jin-Dong Kim2020-03-23Released
CORD-19_bioRxiv_medRxiv_subset The bioRxiv/medRxiv subset of the CORD-19 dataset: pre-prints that are not peer reviewed. The documents in this project will be updated as the CORD-19 dataset grows. See the COVID DATASET LICENSE AGREEMENT. 0Jin-Dong Kim2020-03-23Released
CORD-19_Commercial_use_subset The Commercial use subset of the CORD-19 dataset. The documents in this project will be updated as the CORD-19 dataset grows. See the COVID DATASET LICENSE AGREEMENT.0Jin-Dong Kim2020-03-23Released
CORD-19_Custom_license_subset The Custom license subset of the CORD-19 dataset. The documents in this project will be updated as the CORD-19 dataset grows. See the COVID DATASET LICENSE AGREEMENT.5.08 MJin-Dong Kim2020-04-10Released
CORD-19_Non-commercial_use_subset The Non commercial use subset of the CORD-19 dataset. The documents in this project will be updated as the CORD-19 dataset grows. See the COVID DATASET LICENSE AGREEMENT.0Jin-Dong Kim2020-03-23Released
Name T# Ann.AuthorMaintainerUpdated_atStatus

1-20 / 119 show all
AGCA_Sue 0Jingbo Xia, Xuan Qin, Kaiyin Zhou2017-11-13Developing
Allie 8.7 MDatabase Center for Life ScienceYasunori Yamamoto2019-06-06Developing
AlvisNLP-Async-Test 0Robert Bossyrbossy2017-04-07Testing
BioASQ-sample 0BioASQJin-Dong Kim2015-10-13Testing
BioNLP16_DUT 6.5 KMessiy2017-06-01Testing
BioNLP16_Messiy 6.5 KMessiy2017-06-02Testing
bionlp-st-ge-2016-reference-eval 426Jin-Dong Kim2019-05-01Testing
bionlp-st-ge-2016-reference-tees 14.6 KNico Colic Nico Colic2016-05-25Released
bionlp-st-ge-2016-spacy-parsed 226 KNico ColicNico Colic2016-05-25Released
bionlp-st-ge-2016-test-ihmc 14.4 KLucian Galescu2016-05-15Testing
bionlp-st-ge-2016-test-tees 9.17 KNico ColicNico Colic2016-05-25Released
bionlp-st-ge-2016-uniprot 16.2 KDBCLSJin-Dong Kim2016-05-22Beta
biosemtest 35.6 KMark Thompsonmarkthompson2015-12-17Testing
Biotea 895 KL. Garcia2019-03-12Developing
BLAH2015_Annotations_Adderall 0nestoralvaronestoralvaro2015-03-15Testing
CORD-19_All_docs 0Jin-Dong Kim2020-03-23Released
CORD-19_bioRxiv_medRxiv_subset 0Jin-Dong Kim2020-03-23Released
CORD-19_Commercial_use_subset 0Jin-Dong Kim2020-03-23Released
CORD-19_Custom_license_subset 5.08 MJin-Dong Kim2020-04-10Released
CORD-19_Non-commercial_use_subset 0Jin-Dong Kim2020-03-23Released