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PMC:PMC3633829 JSONTXT

Divisions (16) JSON TSV

div. section text # proj. length # Ann.
0 TIAB Comparative Analysis of the Peanut Witches'-Broom Phytoplasma Genome Reveals Horizontal Transfer of 1 1940 0 show
1 Introduction Phytoplasmas are a group of phytopathogenic bacteria that are transmitted by sap-feeding insect vect 1 1542 0 show
2 Results and Discussion Phylogenetic placement of the PnWB phytoplasma According to the molecular phylogeny inferred from th 1 2113 0 show
3 Results and Discussion PnWB phytoplasma genome assembly The draft genome assembly of the PnWB phytoplasma strain NTU2011 co 1 4539 0 show
4 Results and Discussion Comparative analysis of gene content The comparative analysis of the five phytoplasma genomes (Table 1 4757 0 show
5 Results and Discussion Molecular evolution of potential mobile units One interesting feature of the phytoplasma genomes is 1 3627 0 show
6 Materials and Methods Strain source and DNA preparation The PnWB phytoplasma was initially collected from naturally infect 1 749 0 show
7 Materials and Methods Molecular phylogenetic inference To determine the phylogenetic placement of the PnWB phytoplasma, th 1 1820 0 show
8 Materials and Methods Shotgun sequencing and genome assembly To obtain the genome sequence of PnWB NTU2011, we used a comm 1 2718 0 show
9 Materials and Methods Genome annotation and homologous gene identification To annotate the PnWB NTU2011 genome, we utilize 1 3770 0 show
10 Caption-Figure 1 Molecular phylogeny of phytoplasmas. The maximum likelihood tree is inferred based on the 16S riboso 1 870 0 show
11 Caption-Figure 2 Functional classification of annotated protein-coding genes according to COG assignments. Genes with 1 412 0 show
12 Caption-Figure 3 Distribution patterns of homologous gene clusters. Panels (A) and (B) are based on all protein-codin 1 989 0 show
13 Caption-Figure 4 Highlights of selected metabolic pathways and transporters in phytoplasmas. The color-coded circles 1 290 0 show
14 Caption-Figure 5 Molecular phylogeny of conserved and PMU-associated genes. The numbers on the internal branches indi 1 893 0 show
15 Caption-Table 1 Genome assembly statistics. 1 27 0 show