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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 13-18 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T2 156-178 Body_part denotes central nervous system http://purl.org/sig/ont/fma/fma55675
T3 270-275 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T4 480-485 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T5 768-773 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T6 1083-1088 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T7 1093-1098 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T8 1129-1134 Body_part denotes Brain http://purl.org/sig/ont/fma/fma50801
T9 1354-1360 Body_part denotes cortex http://purl.org/sig/ont/fma/fma61109
T10 1378-1396 Body_part denotes subarachnoid space http://purl.org/sig/ont/fma/fma83716
T11 1796-1801 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T12 1999-2005 Body_part denotes cortex http://purl.org/sig/ont/fma/fma61109
T13 2023-2041 Body_part denotes subarachnoid space http://purl.org/sig/ont/fma/fma83716
T14 2338-2345 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T15 2522-2527 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T16 2710-2715 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T17 2783-2788 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T18 2850-2866 Body_part denotes white blood cell http://purl.org/sig/ont/fma/fma62852
T19 2862-2866 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T20 2874-2882 Body_part denotes platelet http://purl.org/sig/ont/fma/fma62851
T21 3245-3250 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T22 3348-3352 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T23 3365-3370 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T24 3394-3399 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T25 3534-3539 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T26 3861-3866 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T27 3917-3922 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T28 3993-3998 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T29 4305-4317 Body_part denotes white matter http://purl.org/sig/ont/fma/fma83929
T30 4358-4362 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T31 4829-4833 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723
T32 5128-5133 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T33 5292-5297 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T34 5956-5961 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 13-18 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T2 156-178 Body_part denotes central nervous system http://purl.obolibrary.org/obo/UBERON_0001017
T3 164-178 Body_part denotes nervous system http://purl.obolibrary.org/obo/UBERON_0001016
T4 270-275 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T5 480-485 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T6 768-773 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T7 1083-1088 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T8 1093-1098 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T9 1129-1134 Body_part denotes Brain http://purl.obolibrary.org/obo/UBERON_0000955
T10 1354-1360 Body_part denotes cortex http://purl.obolibrary.org/obo/UBERON_0001851
T11 1378-1396 Body_part denotes subarachnoid space http://purl.obolibrary.org/obo/UBERON_0000315
T12 1796-1801 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T13 1999-2005 Body_part denotes cortex http://purl.obolibrary.org/obo/UBERON_0001851
T14 2023-2041 Body_part denotes subarachnoid space http://purl.obolibrary.org/obo/UBERON_0000315
T15 2522-2527 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T16 2710-2715 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T17 2783-2788 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T18 2856-2861 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T19 3245-3250 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T20 3348-3352 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T21 3365-3370 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T22 3394-3399 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T23 3534-3539 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T24 3861-3866 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T25 3917-3922 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T26 3993-3998 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T27 4305-4317 Body_part denotes white matter http://purl.obolibrary.org/obo/UBERON_0002316
T28 4358-4362 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T29 4829-4833 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638
T30 5128-5133 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T31 5292-5297 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T32 5956-5961 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 38-46 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 114-122 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 230-239 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T4 523-531 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 611-630 Disease denotes respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T6 806-814 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 815-824 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T8 1685-1693 Disease denotes ischemia http://purl.obolibrary.org/obo/MONDO_0005053
T9 1854-1862 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1863-1872 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T11 3216-3239 Disease denotes intracranial hemorrhage http://purl.obolibrary.org/obo/MONDO_0005049
T12 3266-3284 Disease denotes pulmonary embolism http://purl.obolibrary.org/obo/MONDO_0005279
T13 4038-4046 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 4047-4056 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 4433-4441 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 4593-4619 Disease denotes thrombotic microangiopathy http://purl.obolibrary.org/obo/MONDO_0019737
T17 4889-4906 Disease denotes venous thrombosis http://purl.obolibrary.org/obo/MONDO_0008559
T18 4896-4906 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T19 4922-4930 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 13-18 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T2 13-18 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T3 123-126 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 156-178 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T5 156-178 http://www.ebi.ac.uk/efo/EFO_0000302 denotes central nervous system
T6 156-178 http://www.ebi.ac.uk/efo/EFO_0000908 denotes central nervous system
T7 270-275 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T8 270-275 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T9 357-358 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 369-371 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T11 409-410 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 480-485 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T13 480-485 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T14 680-683 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T15 726-727 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 768-773 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T17 768-773 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T18 1011-1019 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T19 1083-1088 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T20 1093-1098 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T21 1093-1098 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T22 1129-1134 http://purl.obolibrary.org/obo/UBERON_0000955 denotes Brain
T23 1129-1134 http://www.ebi.ac.uk/efo/EFO_0000302 denotes Brain
T24 1354-1360 http://purl.obolibrary.org/obo/UBERON_0001851 denotes cortex
T25 1796-1801 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T26 1796-1801 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T27 1874-1875 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 1879-1883 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T29 1879-1883 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T30 1999-2005 http://purl.obolibrary.org/obo/UBERON_0001851 denotes cortex
T31 2133-2137 http://purl.obolibrary.org/obo/UBERON_0003101 denotes Male
T32 2133-2137 http://www.ebi.ac.uk/efo/EFO_0000970 denotes Male
T33 2468-2469 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 2522-2527 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T35 2522-2527 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T36 2550-2553 http://purl.obolibrary.org/obo/CLO_0001046 denotes 116
T37 2710-2715 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T38 2710-2715 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T39 2783-2788 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T40 2783-2788 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T41 2856-2861 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T42 2862-2866 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T43 3245-3250 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T44 3348-3352 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T45 3348-3352 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T46 3365-3370 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T47 3394-3399 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T48 3394-3399 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T49 3534-3539 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T50 3534-3539 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T51 3861-3866 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T52 3861-3866 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T53 3917-3922 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T54 3917-3922 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T55 3963-3964 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T56 3993-3998 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T57 3993-3998 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T58 4358-4362 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T59 4358-4362 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T60 4410-4411 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 4696-4697 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 4829-4833 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T63 4829-4833 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein
T64 5053-5054 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 5128-5133 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T66 5128-5133 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T67 5292-5297 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T68 5292-5297 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T69 5356-5357 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T70 5511-5513 http://purl.obolibrary.org/obo/CLO_0007074 denotes kb
T71 5511-5513 http://purl.obolibrary.org/obo/CLO_0051988 denotes kb
T72 5956-5961 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 2338-2345 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T2 2890-2892 Chemical denotes PT http://purl.obolibrary.org/obo/CHEBI_141395
T3 3560-3573 Chemical denotes anticoagulant http://purl.obolibrary.org/obo/CHEBI_50249
T4 5078-5091 Chemical denotes anticoagulant http://purl.obolibrary.org/obo/CHEBI_50249

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-59 Sentence denotes Pathological brain CT scans in severe COVID-19 ICU patients
T2 61-73 Sentence denotes Dear Editor,
T3 74-244 Sentence denotes Neurologic involvement in patients with COVID-19 has been recently reported, with central nervous system symptoms being more common in patients with severe infection [1].
T4 245-436 Sentence denotes Accordingly, preliminary brain MRI findings in patients in the intensive care unit (ICU) have been described in a cohort of 27 patients with neurologic symptoms in a multi-center setting [2].
T5 437-710 Sentence denotes However, no data have yet been reported on brain computed tomography (CT) findings in COVID-19 patients in the ICU, and the relationship between acute imaging abnormalities, respiratory failure severity and alteration of laboratory parameters has not been investigated yet.
T6 711-912 Sentence denotes Here we report a single-center retrospective analysis on brain CT findings in 23 patients with COVID-19 infection (21 M, 2F, mean age 60.2 ± 7.9 years), admitted to the two mobile ICUs at our hospital.
T7 913-1042 Sentence denotes All patients received invasive mechanical ventilation, six of them had veno-venous extracorporeal membrane oxygenation (VV-ECMO).
T8 1043-1128 Sentence denotes As soon as clinical state allowed, both chest and brain CT in one run were performed.
T9 1129-1272 Sentence denotes Brain CT scans demonstrated acute lesions in 9 out of 23 cases (39%), with imaging findings being highly consistent throughout all the studies.
T10 1273-1545 Sentence denotes Multifocal, linear hyperdensities suggestive for hemorrhages, involving both the cortex and the adjacent subarachnoid space, were evident in seven out of nine cases (30% of all the patients), with very subtle superficial enhancement after contrast administration (Fig. 1).
T11 1546-1746 Sentence denotes The remaining two cases (8.6%) showed cortical–subcortical areas of hypoattenuation with sulcal effacement, consistent with acute–subacute ischemia, with hemorrhagic transformation in one case (4.3%).
T12 1747-1878 Sentence denotes Fig. 1 Plain (left column) and contrast-enhanced brain CT scans (right column) in two patients with severe COVID-19 infection. a–f:
T13 1879-2132 Sentence denotes Male, 62 years old, with multifocal, linear hyperdensities suggestive for hemorrhages (open arrows), involving both the cortex and the adjacent subarachnoid space, with very subtle superficial enhancement after contrast administration (arrowheads). g–l:
T14 2133-2280 Sentence denotes Male, 65 years old, with superficial areas of cortical hyperdensity (open arrows) with faint enhancement after contrast administration (arrowheads)
T15 2281-2457 Sentence denotes CT-positive patients had significantly higher C-reactive protein (173.4 vs. 64 mg/L, p = 0.002) and elevated D-dimer (2.96 vs. 1.54 µg/mL, p = 0.018) than CT-negative patients.
T16 2458-2638 Sentence denotes Moreover, a significantly lower PaO2/FIO2 ratio was observed in brain CT-positive patients (116 vs. 161, p = 0.033) (see Electronic Supplementary Material, e-Table 1 and e-Fig. 1).
T17 2639-3037 Sentence denotes Age and time intervals (from symptoms’ onset and from ICU admission to brain CT), as well as other laboratory parameters recorded on the day of brain CT (FiO2, minimum and maximum PaO2 and PaCO2, LDH, ferritin, white blood cell count, platelet count, PT, and aPTT), were not significantly different in the two groups of the patients (see Electronic Supplementary Material, e-Table 1 and e-Fig. 1 ).
T18 3038-3296 Sentence denotes No significant associations were observed between the presence of pathological neuroradiological findings and medical comorbidities, use of VV-ECMO, presence of risk factors for intracranial hemorrhage, and chest CT evidence of pulmonary embolism (e-Fig. 2).
T19 3297-3477 Sentence denotes The percentage and absolute volume of well-aerated lung obtained at chest CT tend to be lower in brain CT positive patients, without reaching significance (e-Fig. 1 and e-Table 1).
T20 3478-3768 Sentence denotes No significant associations were found between positive brain CT and the provided anticoagulant therapy (e-Fig. 2), even if the association with anticoagulation itself cannot be evaluated since all patients had therapeutic-intensity anticoagulation according to the local hospital protocol.
T21 3769-3938 Sentence denotes At the time of this analysis, 16 weeks after ICU admission, 66.7% of patients with positive brain CT have died versus 35.7% of patients with normal brain CT (p = 0.147).
T22 3939-4057 Sentence denotes In conclusion, we noted a high percentage of abnormal brain CT studies in ICU patients with severe COVID-19 infection.
T23 4058-4214 Sentence denotes Such abnormalities were hemorrhagic in most of the cases, highly consistent across patients, and related to worse P/F ratio and higher inflammatory indexes.
T24 4215-4375 Sentence denotes The superficial distribution of hemorrhagic lesions is unusual and clearly different from white matter microhemorrhages described after severe lung failure [3].
T25 4376-4747 Sentence denotes We speculate on the occurrence of a diverse mechanism in COVID-19 patients, possibly related to endothelial damage [4], resulting in impaired microcirculatory function and vascular fragility with microhemorrhages, or thrombotic microangiopathy [5], that may be supported by similar imaging findings recently reported in a small cohort of four critically ill patients [6].
T26 4748-4937 Sentence denotes The imaging picture could also be related to the occurrence of isolated cortical vein microthrombosis, considering the increased tendency to venous thrombosis in more severe COVID-19 cases.
T27 4938-5258 Sentence denotes Due to the therapeutic-intensity anticoagulation common to all cases, it is not possible to make any conclusion on a possible impact of the anticoagulant therapy itself on the prevalence of brain CT hemorrhages in the studied cohort, particularly in the absence of sufficient evidence-based data on the topic at present.
T28 5259-5384 Sentence denotes The association between abnormal brain CT and patients’ outcome deserves further confirmation in a larger cohort of patients.
T29 5386-5419 Sentence denotes Electronic supplementary material
T30 5421-5514 Sentence denotes Below is the link to the electronic supplementary material.Supplementary file1 (DOCX 1488 kb)
T31 5516-5532 Sentence denotes Publisher's Note
T32 5533-5651 Sentence denotes Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
T33 5653-5669 Sentence denotes Acknowledgements
T34 5670-5927 Sentence denotes We thank all the colleagues of the Intensive Care Unit of San Raffaele Hospital, especially Antonio Dell’Acqua for careful data collection and interpretation, and Alberto Zangrillo and Giovanni Landoni for their precious contribution to data interpretation.
T35 5928-5998 Sentence denotes We thank Riccardo Leone for chest CT data revision and interpretation.
T36 6000-6033 Sentence denotes Compliance with ethical standards
T37 6035-6056 Sentence denotes Conflicts of interest
T38 6057-6136 Sentence denotes The authors declare that they have no competing interests related to this work.
T39 6138-6154 Sentence denotes Ethical approval
T40 6155-6259 Sentence denotes The study was approved by the Ethics Committee of IRCCS San Raffaele Scientific Institute, Milan, Italy.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 223-239 Phenotype denotes severe infection http://purl.obolibrary.org/obo/HP_0032169
T2 611-630 Phenotype denotes respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T3 2381-2397 Phenotype denotes elevated D-dimer http://purl.obolibrary.org/obo/HP_0033106
T4 3216-3239 Phenotype denotes intracranial hemorrhage http://purl.obolibrary.org/obo/HP_0002170
T5 3266-3284 Phenotype denotes pulmonary embolism http://purl.obolibrary.org/obo/HP_0002204
T6 4889-4906 Phenotype denotes venous thrombosis http://purl.obolibrary.org/obo/HP_0004936

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1 13-18 UBERON:0000955 denotes brain
T2 38-46 SP_7 denotes COVID-19
T3 74-84 UBERON:0001016 denotes Neurologic
T4 114-122 SP_7 denotes COVID-19
T5 156-178 UBERON:0001017 denotes central nervous system
T6 270-275 UBERON:0000955 denotes brain
T7 308-327 UBERON:0007221 denotes intensive care unit
T8 386-396 UBERON:0001016 denotes neurologic
T9 480-485 UBERON:0000955 denotes brain
T10 523-531 SP_7 denotes COVID-19
T11 611-622 UBERON:0001004 denotes respiratory
T12 768-773 UBERON:0000955 denotes brain
T13 806-814 SP_7 denotes COVID-19
T14 984-988 UBERON:0001638 denotes veno
T15 989-995 UBERON:0001638 denotes venous
T16 1020-1031 GO:0015671 denotes oxygenation
T17 1083-1088 UBERON:0001443 denotes chest
T18 1093-1098 UBERON:0000955 denotes brain
T19 1129-1134 UBERON:0000955 denotes Brain
T20 1354-1360 UBERON:0001851 denotes cortex
T21 1378-1390 UBERON:0000315 denotes subarachnoid
T22 1584-1592 UBERON:0001851 denotes cortical
T23 1593-1604 UBERON:0003893 denotes subcortical
T24 1796-1801 UBERON:0000955 denotes brain
T25 1854-1862 SP_7 denotes COVID-19
T26 1999-2005 UBERON:0001851 denotes cortex
T27 2023-2035 UBERON:0003893 denotes subarachnoid
T28 2179-2187 UBERON:0001851 denotes cortical
T29 3161-3218 UBERON:0000955 denotes bidities, use of VV-ECMO, presence of risk factors for in
T30 4038-4046 SP_7 denotes COVID-19
T31 4135-4150 UBERON:0001851 denotes cross patients,
T32 4169-4181 UBERON:0003893 denotes se P/F ratio
T33 4282-4288 UBERON:0001851 denotes clearl
T34 4351-4357 PR:000005897 denotes severe
T35 4430-4432 UBERON:0000955 denotes in
T38 4540-4542 CHEBI:16526;CHEBI:16526 denotes io
T41 4567-4571 CL:0000738 denotes with
T45 4721-4732 UBERON:0000970 denotes itically il
T46 4736-4737 UBERON:0001443 denotes t
T49 4794-4796 UBERON:0001443 denotes he
T51 4891-4892 UBERON:0000955 denotes n
T52 4907-4909 GO:0050817 denotes in
T53 4931-4933 GO:0050817 denotes ca
T54 4971-4986 GO:0050817 denotes anticoagulation
T72 5128-5133 UBERON:0000955 denotes brain
T73 5292-5297 UBERON:0000955 denotes brain
T20920 13-18 UBERON:0000955 denotes brain
T45056 38-46 SP_7 denotes COVID-19
T15396 74-84 UBERON:0001016 denotes Neurologic
T77274 114-122 SP_7 denotes COVID-19
T21341 156-178 UBERON:0001017 denotes central nervous system
T64893 270-275 UBERON:0000955 denotes brain
T89195 308-327 UBERON:0007221 denotes intensive care unit
T58381 386-396 UBERON:0001016 denotes neurologic
T52439 480-485 UBERON:0000955 denotes brain
T12532 523-531 SP_7 denotes COVID-19
T80327 611-622 UBERON:0001004 denotes respiratory
T78331 768-773 UBERON:0000955 denotes brain
T81165 806-814 SP_7 denotes COVID-19
T95073 984-988 UBERON:0001638 denotes veno
T85160 989-995 UBERON:0001638 denotes venous
T28713 1020-1031 GO:0015671 denotes oxygenation
T48707 1083-1088 UBERON:0001443 denotes chest
T93128 1093-1098 UBERON:0000955 denotes brain
T11423 1129-1134 UBERON:0000955 denotes Brain
T7142 1354-1360 UBERON:0001851 denotes cortex
T79533 1378-1390 UBERON:0000315 denotes subarachnoid
T53896 1584-1592 UBERON:0001851 denotes cortical
T58678 1593-1604 UBERON:0003893 denotes subcortical
T1325 1796-1801 UBERON:0000955 denotes brain
T70127 1854-1862 SP_7 denotes COVID-19
T54385 1999-2005 UBERON:0001851 denotes cortex
T1625 2023-2035 UBERON:0003893 denotes subarachnoid
T38270 2179-2187 UBERON:0001851 denotes cortical
T68476 4038-4046 SP_7 denotes COVID-19
T36 2710-2715 UBERON:0000955 denotes brain
T37 2783-2788 UBERON:0000955 denotes brain
T69168 2793-2797 CHEBI:16526;CHEBI:16526 denotes FiO2
T39 2819-2823 CHEBI:16526;CHEBI:16526 denotes PaO2
T40 2828-2833 CHEBI:16526;CHEBI:16526 denotes PaCO2
T35826 2850-2855 CL:0000738 denotes white
T42 2856-2861 CL:0000738;UBERON:0000178 denotes blood
T43 2862-2866 CL:0000738 denotes cell
T44 2874-2882 CL:0000233 denotes platelet
T53881 3216-3228 UBERON:0000970 denotes intracranial
T98259 3245-3250 UBERON:0001443 denotes chest
T47 3266-3275 UBERON:0002048 denotes pulmonary
T48 3348-3352 UBERON:0002048 denotes lung
T9577 3365-3370 UBERON:0001443 denotes chest
T50 3394-3399 UBERON:0000955 denotes brain
T59708 3534-3539 UBERON:0000955 denotes brain
T4194 3560-3573 GO:0050817 denotes anticoagulant
T94098 3623-3638 GO:0050817 denotes anticoagulation
T12038 3711-3726 GO:0050817 denotes anticoagulation
T55 3861-3866 UBERON:0000955 denotes brain
T56 3875-3879 GO:0016265 denotes died
T57 3917-3922 UBERON:0000955 denotes brain
T58 3993-3998 UBERON:0000955 denotes brain
T59 4038-4046 SP_7 denotes COVID-19
T60 4305-4317 UBERON:0002316 denotes white matter
T61 4358-4362 UBERON:0002048 denotes lung
T62 4433-4441 SP_7 denotes COVID-19
T63 4472-4483 UBERON:0001986 denotes endothelial
T64 4593-4603 GO:0007596 denotes thrombotic
T65 4820-4828 UBERON:0001851 denotes cortical
T66 4829-4833 UBERON:0001638 denotes vein
T67 4834-4849 GO:0007596 denotes microthrombosis
T68 4889-4895 UBERON:0001638 denotes venous
T69 4896-4906 GO:0007596 denotes thrombosis
T70 4922-4930 SP_7 denotes COVID-19
T71 4971-4986 GO:0050817 denotes anticoagulation
T93069 5128-5133 UBERON:0000955 denotes brain
T54194 5292-5297 UBERON:0000955 denotes brain

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 38-46 Disease denotes COVID-19 MESH:C000657245
13 100-108 Species denotes patients Tax:9606
14 209-217 Species denotes patients Tax:9606
15 292-300 Species denotes patients Tax:9606
16 372-380 Species denotes patients Tax:9606
17 532-540 Species denotes patients Tax:9606
18 114-122 Disease denotes COVID-19 MESH:C000657245
19 164-187 Disease denotes nervous system symptoms MESH:D012818
20 230-239 Disease denotes infection MESH:D007239
21 386-405 Disease denotes neurologic symptoms MESH:D009422
22 523-531 Disease denotes COVID-19 MESH:C000657245
23 611-630 Disease denotes respiratory failure MESH:D012131
28 792-800 Species denotes patients Tax:9606
29 917-925 Species denotes patients Tax:9606
30 806-814 Disease denotes COVID-19 MESH:C000657245
31 815-824 Disease denotes infection MESH:D007239
36 1833-1841 Species denotes patients Tax:9606
37 1854-1862 Disease denotes COVID-19 MESH:C000657245
38 1863-1872 Disease denotes infection MESH:D007239
39 1953-1964 Disease denotes hemorrhages MESH:D006470
44 1454-1462 Species denotes patients Tax:9606
45 1322-1333 Disease denotes hemorrhages MESH:D006470
46 1685-1693 Disease denotes ischemia MESH:D007511
47 1700-1711 Disease denotes hemorrhagic MESH:D006470
52 2327-2345 Gene denotes C-reactive protein Gene:1401
53 2293-2301 Species denotes patients Tax:9606
54 2448-2456 Species denotes patients Tax:9606
55 2540-2548 Species denotes patients Tax:9606
57 2963-2971 Species denotes patients Tax:9606
62 3412-3420 Species denotes patients Tax:9606
63 3676-3684 Species denotes patients Tax:9606
64 3216-3239 Disease denotes intracranial hemorrhage MESH:D020300
65 3266-3284 Disease denotes pulmonary embolism MESH:D011655
68 3838-3846 Species denotes patients Tax:9606
69 3896-3904 Species denotes patients Tax:9606
90 4017-4025 Species denotes patients Tax:9606
91 4141-4149 Species denotes patients Tax:9606
92 4442-4450 Species denotes patients Tax:9606
93 4734-4742 Species denotes patients Tax:9606
94 5305-5313 Species denotes patients Tax:9606
95 5375-5383 Species denotes patients Tax:9606
96 4038-4046 Disease denotes COVID-19 MESH:C000657245
97 4047-4056 Disease denotes infection MESH:D007239
98 4082-4093 Disease denotes hemorrhagic MESH:D006470
99 4247-4266 Disease denotes hemorrhagic lesions MESH:D006470
100 4305-4334 Disease denotes white matter microhemorrhages MESH:D056784
101 4358-4370 Disease denotes lung failure MESH:D012131
102 4433-4441 Disease denotes COVID-19 MESH:C000657245
103 4572-4588 Disease denotes microhemorrhages
104 4593-4619 Disease denotes thrombotic microangiopathy MESH:D057049
105 4719-4733 Disease denotes critically ill MESH:D016638
106 4829-4849 Disease denotes vein microthrombosis MESH:D020246
107 4889-4906 Disease denotes venous thrombosis MESH:D020246
108 4922-4930 Disease denotes COVID-19 MESH:C000657245
109 5137-5148 Disease denotes hemorrhages MESH:D006470