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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 152-160 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T2 583-593 Body_part denotes troponin-I http://purl.org/sig/ont/fma/fma62340
T3 876-891 Body_part denotes coronary artery http://purl.org/sig/ont/fma/fma49893
T4 926-931 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T5 984-992 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T6 1145-1153 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T7 1284-1294 Body_part denotes troponin I http://purl.org/sig/ont/fma/fma62340
T8 1284-1292 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T9 1441-1451 Body_part denotes troponin I http://purl.org/sig/ont/fma/fma62340
T10 1441-1449 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T11 1665-1673 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T12 1814-1822 Body_part denotes Troponin http://purl.org/sig/ont/fma/fma62338

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 876-891 Body_part denotes coronary artery http://purl.obolibrary.org/obo/UBERON_0001621
T2 885-891 Body_part denotes artery http://purl.obolibrary.org/obo/UBERON_0001637
T3 926-931 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
4 46-54 Species denotes Patients Tax:9606
5 25-42 Disease denotes Myocardial Injury MESH:D009202
6 73-81 Disease denotes COVID-19 MESH:C000657245
7 82-91 Disease denotes Infection MESH:D007239
12 218-226 Species denotes patients Tax:9606
13 117-134 Disease denotes myocardial injury MESH:D009202
14 232-256 Disease denotes Coronavirus Disease 2019 MESH:C000657245
15 258-266 Disease denotes COVID-19 MESH:C000657245
18 318-335 Disease denotes myocardial injury MESH:D009202
19 417-425 Disease denotes COVID-19 MESH:C000657245
22 435-443 Species denotes Patients Tax:9606
23 449-457 Disease denotes COVID-19 MESH:C000657245
37 832-835 Species denotes men Tax:9606
38 963-971 Species denotes patients Tax:9606
39 1067-1075 Species denotes patients Tax:9606
40 1123-1131 Species denotes patients Tax:9606
41 837-859 Disease denotes Cardiovascular disease MESH:D002318
42 861-864 Disease denotes CVD MESH:D002318
43 876-899 Disease denotes coronary artery disease MESH:D003324
44 901-920 Disease denotes atrial fibrillation MESH:D001281
45 926-939 Disease denotes heart failure MESH:D006333
46 1017-1029 Disease denotes hypertension MESH:D006973
47 1034-1042 Disease denotes diabetes MESH:D003920
48 1260-1277 Disease denotes myocardial injury MESH:D009202
49 1360-1365 Disease denotes death MESH:D003643
61 1621-1629 Species denotes patients Tax:9606
62 1727-1735 Species denotes Patients Tax:9606
63 1792-1800 Species denotes patients Tax:9606
64 1839-1847 Species denotes patients Tax:9606
65 1584-1601 Disease denotes Myocardial injury MESH:D009202
66 1648-1656 Disease denotes COVID-19 MESH:C000657245
67 1741-1744 Disease denotes CVD MESH:D002318
68 1769-1786 Disease denotes myocardial injury MESH:D009202
69 1809-1812 Disease denotes CVD MESH:D002318
70 1866-1874 Disease denotes COVID-19 MESH:C000657245
71 1909-1918 Disease denotes mortality MESH:D003643

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 36-42 Disease denotes Injury http://purl.obolibrary.org/obo/MONDO_0021178
T2 73-81 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 82-91 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T4 128-134 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T5 232-256 Disease denotes Coronavirus Disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T6 258-266 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 329-335 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T8 417-425 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 449-457 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 837-865 Disease denotes Cardiovascular disease (CVD) http://purl.obolibrary.org/obo/MONDO_0004995
T11 876-899 Disease denotes coronary artery disease http://purl.obolibrary.org/obo/MONDO_0005010
T12 885-899 Disease denotes artery disease http://purl.obolibrary.org/obo/MONDO_0000473
T13 901-920 Disease denotes atrial fibrillation http://purl.obolibrary.org/obo/MONDO_0004981
T14 926-939 Disease denotes heart failure http://purl.obolibrary.org/obo/MONDO_0005252
T15 1017-1029 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T16 1034-1042 Disease denotes diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T17 1271-1277 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T18 1595-1601 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T19 1648-1656 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T20 1780-1786 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T21 1866-1874 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 281-291 http://purl.obolibrary.org/obo/BFO_0000030 denotes Objectives
T2 363-364 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 885-891 http://purl.obolibrary.org/obo/UBERON_0001637 denotes artery
T4 885-891 http://www.ebi.ac.uk/efo/EFO_0000814 denotes artery
T5 926-931 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T6 926-931 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T7 926-931 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T8 926-931 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T9 1044-1045 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T10 1055-1058 http://purl.obolibrary.org/obo/CLO_0001404 denotes 506
T11 1118-1120 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T12 1313-1316 http://purl.obolibrary.org/obo/CLO_0001375 denotes 455

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-91 Sentence denotes Prevalence and Impact of Myocardial Injury in Patients Hospitalized with COVID-19 Infection
T2 92-102 Sentence denotes Background
T3 103-280 Sentence denotes The degree of myocardial injury, as reflected by troponin elevation, and associated outcomes among US hospitalized patients with Coronavirus Disease 2019 (COVID-19) are unknown.
T4 281-291 Sentence denotes Objectives
T5 292-426 Sentence denotes To describe the degree of myocardial injury and associated outcomes in a large hospitalized cohort with laboratory-confirmed COVID-19.
T6 427-434 Sentence denotes Methods
T7 435-682 Sentence denotes Patients with COVID-19 admitted to one of five Mount Sinai Health System hospitals in New York City between February 27th and April 12th, 2020 with troponin-I (normal value <0.03ng/mL) measured within 24 hours of admission were included (n=2,736).
T8 683-781 Sentence denotes Demographics, medical history, admission labs, and outcomes were captured from the hospitals’ EHR.
T9 782-789 Sentence denotes Results
T10 790-836 Sentence denotes The median age was 66.4 years, with 59.6% men.
T11 837-1043 Sentence denotes Cardiovascular disease (CVD) including coronary artery disease, atrial fibrillation, and heart failure, was more prevalent in patients with higher troponin concentrations, as were hypertension and diabetes.
T12 1044-1104 Sentence denotes A total of 506 (18.5%) patients died during hospitalization.
T13 1105-1169 Sentence denotes In all, 985 (36%) patients had elevated troponin concentrations.
T14 1170-1379 Sentence denotes After adjusting for disease severity and relevant clinical factors, even small amounts of myocardial injury (e.g. troponin I 0.03-0.09ng/mL, n=455, 16.6%) were significantly associated with death (adjusted HR:
T15 1380-1571 Sentence denotes 1.75, 95% CI 1.37-2.24; P<0.001) while greater amounts (e.g. troponin I>0.09 ng/dL, n=530, 19.4%) were significantly associated with higher risk (adjusted HR 3.03, 95% CI 2.42-3.80; P<0.001).
T16 1572-1583 Sentence denotes Conclusions
T17 1584-1726 Sentence denotes Myocardial injury is prevalent among patients hospitalized with COVID-19 however troponin concentrations were generally present at low levels.
T18 1727-1813 Sentence denotes Patients with CVD are more likely to have myocardial injury than patients without CVD.
T19 1814-1919 Sentence denotes Troponin elevation among patients hospitalized with COVID-19 is associated with higher risk of mortality.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 837-859 Phenotype denotes Cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T2 901-920 Phenotype denotes atrial fibrillation http://purl.obolibrary.org/obo/HP_0005110
T3 926-939 Phenotype denotes heart failure http://purl.obolibrary.org/obo/HP_0001635
T4 1017-1029 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822