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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 2196-2200 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T2 4813-4816 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T3 4850-4857 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T4 4868-4871 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T5 5127-5132 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T6 5178-5185 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T7 5295-5301 Body_part denotes serine http://purl.org/sig/ont/fma/fma82764
T8 5364-5368 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T9 5462-5468 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T10 5498-5507 Body_part denotes cytoplasm http://purl.org/sig/ont/fma/fma66835
T11 5524-5528 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T12 5566-5570 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T13 5605-5626 Body_part denotes endoplasmic reticulum http://purl.org/sig/ont/fma/fma63842
T14 5731-5737 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T15 5886-5892 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T16 5959-5963 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T17 5964-5971 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T18 6058-6066 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T19 6183-6204 Body_part denotes endoplasmic reticulum http://purl.org/sig/ont/fma/fma63842
T20 6211-6222 Body_part denotes compartment http://purl.org/sig/ont/fma/fma76577
T21 6275-6287 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T22 6275-6279 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T23 6311-6316 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T24 6365-6370 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T25 6441-6457 Body_part denotes epithelial cells http://purl.org/sig/ont/fma/fma66768
T26 6452-6457 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T27 6465-6477 Body_part denotes nasal cavity http://purl.org/sig/ont/fma/fma54378
T28 6791-6797 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T29 7037-7060 Body_part denotes lower respiratory tract http://purl.org/sig/ont/fma/fma45662
T30 7095-7099 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T31 7320-7324 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T32 7350-7356 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T33 7379-7383 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T34 7546-7554 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T35 7582-7590 Body_part denotes cytokine http://purl.org/sig/ont/fma/fma84050
T36 7633-7646 Body_part denotes interleukin-6 http://purl.org/sig/ont/fma/fma264829
T37 7756-7761 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T38 7839-7846 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T39 7897-7905 Body_part denotes troponin http://purl.org/sig/ont/fma/fma62338
T40 7950-7956 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T41 7967-7972 Body_part denotes Chest http://purl.org/sig/ont/fma/fma9576
T42 8236-8240 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T43 8241-8246 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T44 8289-8294 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T45 8347-8352 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T46 8354-8360 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T47 8379-8383 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T48 8400-8405 Body_part denotes organ http://purl.org/sig/ont/fma/fma67498
T49 8411-8415 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T50 8648-8652 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T51 8653-8659 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T52 9170-9188 Body_part denotes respiratory system http://purl.org/sig/ont/fma/fma7158
T53 9473-9480 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T54 9564-9569 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877
T55 9571-9578 Body_part denotes kidneys http://purl.org/sig/ont/fma/fma7203
T56 9584-9592 Body_part denotes prostate http://purl.org/sig/ont/fma/fma9600
T57 9593-9599 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T58 9601-9605 Body_part denotes Gene http://purl.org/sig/ont/fma/fma74402
T59 9668-9673 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T60 9681-9700 Body_part denotes prostate epithelium http://purl.org/sig/ont/fma/fma66812
T61 9681-9689 Body_part denotes prostate http://purl.org/sig/ont/fma/fma9600
T62 9690-9700 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T63 9750-9759 Body_part denotes androgens http://purl.org/sig/ont/fma/fma83375
T64 9788-9797 Body_part denotes estrogens http://purl.org/sig/ont/fma/fma83376
T65 10328-10331 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T66 10348-10356 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T67 10447-10455 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T68 10532-10542 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T69 10559-10566 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T70 10650-10660 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T71 10663-10670 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T72 10739-10746 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T73 10769-10779 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T74 10782-10789 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T75 10850-10860 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T76 10874-10881 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T77 10901-10908 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T78 10969-10974 Body_part denotes lipid http://purl.org/sig/ont/fma/fma67264
T79 11014-11018 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T80 11027-11034 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T81 11077-11084 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T82 11118-11126 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T83 11223-11226 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T84 11237-11240 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T85 11393-11397 Body_part denotes ExoN http://purl.org/sig/ont/fma/fma84120
T86 11460-11463 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T87 11513-11516 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T88 11533-11539 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T89 11846-11854 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T90 12198-12202 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T91 12230-12237 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T92 12653-12658 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T93 12743-12751 Body_part denotes Antibody http://purl.org/sig/ont/fma/fma62871
T94 12803-12810 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T95 13028-13031 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T96 13061-13069 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T97 13243-13251 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871
T98 13381-13385 Body_part denotes back http://purl.org/sig/ont/fma/fma25056
T99 13841-13844 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T100 14006-14015 Body_part denotes lysosomes http://purl.org/sig/ont/fma/fma63836
T101 14515-14518 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T102 14607-14614 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T103 15362-15375 Body_part denotes interleukin-6 http://purl.org/sig/ont/fma/fma264829
T104 15642-15653 Body_part denotes interleukin http://purl.org/sig/ont/fma/fma86578
T105 16316-16324 Body_part denotes cysteine http://purl.org/sig/ont/fma/fma82751
T106 16402-16410 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T107 16459-16464 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T108 18075-18084 Body_part denotes glutamine http://purl.org/sig/ont/fma/fma82752
T109 18400-18406 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T110 18464-18470 Body_part denotes plasma http://purl.org/sig/ont/fma/fma62970
T111 18885-18895 Body_part denotes microsomes http://purl.org/sig/ont/fma/fma67438
T112 19019-19023 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T113 19448-19450 Body_part denotes AG http://purl.org/sig/ont/fma/fma61898
T114 20494-20497 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T115 20800-20804 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T116 20805-20812 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 6465-6477 Body_part denotes nasal cavity http://purl.obolibrary.org/obo/UBERON_0001707
T2 6791-6797 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T3 7037-7060 Body_part denotes lower respiratory tract http://purl.obolibrary.org/obo/UBERON_0001558
T4 7043-7060 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T5 7095-7099 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T6 7320-7324 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T7 7350-7356 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T8 7756-7761 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T9 7950-7956 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T10 7967-7972 Body_part denotes Chest http://purl.obolibrary.org/obo/UBERON_0001443
T11 8236-8240 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 8347-8352 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T13 8354-8360 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T14 8400-8405 Body_part denotes organ http://purl.obolibrary.org/obo/UBERON_0000062
T15 8648-8652 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T16 8653-8659 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T17 8739-8763 Body_part denotes renin-angiotensin system http://purl.obolibrary.org/obo/UBERON_0018229
T18 8765-8768 Body_part denotes RAS http://purl.obolibrary.org/obo/UBERON_0018229
T19 9170-9188 Body_part denotes respiratory system http://purl.obolibrary.org/obo/UBERON_0001004
T20 9593-9599 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T21 9681-9700 Body_part denotes prostate epithelium http://purl.obolibrary.org/obo/UBERON_0000428
T22 9690-9700 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T23 10909-10914 Body_part denotes shell http://purl.obolibrary.org/obo/UBERON_0006612
T24 12653-12658 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T25 13055-13060 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T26 19019-19023 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T27 20800-20804 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 0-8 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 75-83 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T3 126-150 Disease denotes coronavirus disease-2019 http://purl.obolibrary.org/obo/MONDO_0100096
T4 152-160 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 183-201 Disease denotes infectious disease http://purl.obolibrary.org/obo/MONDO_0005550
T6 287-295 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T7 455-465 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T8 858-866 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 1065-1073 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1133-1180 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T11 1133-1166 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T12 1182-1190 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T13 1226-1235 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T14 1338-1362 Disease denotes coronavirus disease-2019 http://purl.obolibrary.org/obo/MONDO_0100096
T15 1364-1372 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 1706-1710 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T17 1763-1771 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T18 1856-1867 Disease denotes common cold http://purl.obolibrary.org/obo/MONDO_0005709
T19 2145-2149 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T20 2161-2169 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T21 2439-2443 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 2477-2485 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T23 2847-2855 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T24 2980-2989 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T25 3153-3162 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T26 3189-3198 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T27 3200-3203 Disease denotes flu http://purl.obolibrary.org/obo/MONDO_0005812
T28 3316-3324 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T29 3952-3961 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T30 4095-4105 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T31 4398-4408 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T32 4554-4562 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T33 4628-4636 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T34 4696-4704 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T35 4740-4748 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T36 4939-4947 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T37 4952-4960 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T38 5109-5117 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T39 6405-6413 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T40 6414-6422 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T41 6544-6553 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T42 6684-6693 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T43 6747-6756 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T44 7043-7070 Disease denotes respiratory tract infection http://purl.obolibrary.org/obo/MONDO_0024355
T45 7061-7070 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T46 7148-7183 Disease denotes acute respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0006502
T47 7154-7183 Disease denotes respiratory distress syndrome http://purl.obolibrary.org/obo/MONDO_0009971
T48 7185-7189 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T49 7255-7277 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T50 7279-7296 Disease denotes diabetes mellitus http://purl.obolibrary.org/obo/MONDO_0005015
T51 7298-7310 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T52 7320-7332 Disease denotes lung disease http://purl.obolibrary.org/obo/MONDO_0005275
T53 7334-7340 Disease denotes cancer http://purl.obolibrary.org/obo/MONDO_0004992
T54 7342-7364 Disease denotes chronic kidney disease http://purl.obolibrary.org/obo/MONDO_0005300
T55 7350-7364 Disease denotes kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T57 7370-7377 Disease denotes obesity http://purl.obolibrary.org/obo/MONDO_0011122
T58 7404-7408 Disease denotes ARDS http://purl.obolibrary.org/obo/MONDO_0006502
T59 7480-7495 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T60 7486-7495 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T61 7573-7576 Disease denotes CRS http://purl.obolibrary.org/obo/MONDO_0007399|http://purl.obolibrary.org/obo/MONDO_0017361
T63 7725-7736 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T64 7944-7963 Disease denotes acute kidney injury http://purl.obolibrary.org/obo/MONDO_0002492
T65 7957-7963 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T66 7999-8007 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T67 8066-8081 Disease denotes viral pneumonia http://purl.obolibrary.org/obo/MONDO_0006012
T68 8072-8081 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T69 8195-8203 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T70 8577-8595 Disease denotes SARS-CoV infection http://purl.obolibrary.org/obo/MONDO_0005091
T71 8586-8595 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T72 9026-9029 Disease denotes AT1 http://purl.obolibrary.org/obo/MONDO_0008840
T73 9233-9245 Disease denotes hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T74 9401-9409 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T75 10130-10138 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T76 10311-10319 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T77 11522-11530 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T78 11827-11835 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T79 11866-11881 Disease denotes Viral Infection http://purl.obolibrary.org/obo/MONDO_0005108
T80 11872-11881 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T81 11904-11912 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T82 12155-12163 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T83 12320-12328 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T84 12404-12412 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T85 12622-12630 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T86 12978-12986 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T87 13201-13209 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T88 13448-13456 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T89 13632-13640 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T90 13715-13723 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T91 13912-13920 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T92 14177-14186 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T93 14253-14272 Disease denotes Ebola virus disease http://purl.obolibrary.org/obo/MONDO_0005737
T94 14311-14319 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T95 14381-14389 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T96 14788-14800 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T97 15120-15128 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T98 15445-15453 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T99 15784-15792 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T100 17471-17479 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T101 18240-18248 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T102 18594-18602 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T103 18611-18619 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T104 18786-18794 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T105 19392-19400 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T106 19896-19904 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T107 19977-19985 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T108 20188-20192 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T109 20204-20212 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T110 20995-21003 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T111 21503-21511 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T112 21740-21748 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T113 21847-21855 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T114 21952-21960 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T115 22025-22033 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 163-164 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 298-301 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T3 396-401 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T4 546-549 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T5 786-791 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T6 895-901 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T7 956-963 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T8 1112-1113 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1258-1261 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T10 1317-1322 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T11 1323-1326 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T12 1387-1389 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T13 1409-1410 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 1447-1459 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T15 1501-1506 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T16 1745-1750 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T17 1897-1902 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T18 1907-1913 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T19 1953-1960 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T20 1976-1977 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 2008-2013 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T22 2102-2107 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T23 2196-2200 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T24 2244-2248 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bats
T25 2292-2299 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T26 2369-2370 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T27 2378-2379 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 2446-2447 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 2448-2453 http://purl.obolibrary.org/obo/NCBITaxon_9837 denotes camel
T30 2465-2466 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T31 2528-2532 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes Bats
T32 2779-2782 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T33 2942-2943 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 3311-3313 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T35 3768-3769 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 3800-3801 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 3897-3902 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T38 4349-4354 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T39 4709-4714 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T40 4817-4822 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T41 4827-4830 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T42 4872-4879 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T43 4920-4922 http://purl.obolibrary.org/obo/CLO_0007074 denotes kb
T44 4920-4922 http://purl.obolibrary.org/obo/CLO_0051988 denotes kb
T45 5072-5077 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T46 5127-5132 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T47 5364-5368 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T48 5397-5405 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T49 5524-5528 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T50 5566-5570 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T51 5576-5581 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T52 5651-5659 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T53 5798-5799 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 5959-5963 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T55 6106-6108 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T56 6275-6279 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T57 6311-6316 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T58 6365-6370 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T59 6441-6451 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T60 6452-6457 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T61 6471-6477 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavity
T62 6606-6611 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T63 6621-6622 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T64 6714-6720 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T65 6959-6966 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airways
T66 7035-7036 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T67 7037-7060 http://purl.obolibrary.org/obo/UBERON_0001558 denotes lower respiratory tract
T68 7095-7099 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T69 7095-7099 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T70 7320-7324 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T71 7320-7324 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T72 7350-7356 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T73 7350-7356 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T74 7350-7356 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T75 7633-7646 http://purl.obolibrary.org/obo/PR_000001393 denotes interleukin-6
T76 7756-7761 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T77 7756-7761 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T78 7874-7885 http://purl.obolibrary.org/obo/PR_000007299 denotes prothrombin
T79 7950-7956 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T80 7950-7956 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T81 7950-7956 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T82 7967-7972 http://www.ebi.ac.uk/efo/EFO_0000965 denotes Chest
T83 8134-8135 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T84 8236-8240 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T85 8236-8240 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T86 8241-8246 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T87 8289-8294 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T88 8347-8352 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T89 8347-8352 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T90 8347-8352 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T91 8347-8352 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T92 8354-8360 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T93 8354-8360 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T94 8354-8360 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T95 8371-8377 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testes
T96 8379-8383 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T97 8400-8405 http://purl.obolibrary.org/obo/UBERON_0003103 denotes organ
T98 8411-8415 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T99 8470-8471 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T100 8648-8652 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T101 8648-8652 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T102 8720-8721 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T103 9073-9074 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T104 9170-9188 http://purl.obolibrary.org/obo/UBERON_0001004 denotes respiratory system
T105 9189-9191 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T106 9443-9445 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T107 9564-9569 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T108 9571-9578 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidneys
T109 9571-9578 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidneys
T110 9571-9578 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidneys
T111 9601-9605 http://purl.obolibrary.org/obo/OGG_0000000002 denotes Gene
T112 9668-9673 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T113 9690-9700 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T114 9834-9837 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T115 10011-10017 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T116 10152-10160 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively
T117 10266-10267 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T118 10416-10418 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T119 10416-10418 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T120 10486-10494 http://purl.obolibrary.org/obo/UBERON_0000158 denotes Membrane
T121 10600-10601 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T122 10671-10674 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T123 10835-10840 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T124 10888-10889 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T125 10926-10931 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T126 10967-10968 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T127 11014-11018 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T128 11048-11056 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T129 11267-11268 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T130 11554-11555 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T131 11812-11814 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T132 11812-11814 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T133 11934-11935 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T134 11992-11994 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T135 12076-12080 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test
T136 12244-12249 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T137 12273-12274 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T138 12358-12361 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T139 12456-12457 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T140 12647-12658 http://purl.obolibrary.org/obo/UBERON_0000178 denotes whole blood
T141 12647-12658 http://www.ebi.ac.uk/efo/EFO_0000296 denotes whole blood
T142 13042-13047 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T143 13070-13077 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T144 13151-13156 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T145 13348-13353 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T146 13567-13568 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T147 13670-13672 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T148 13674-13676 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T149 14006-14015 http://purl.obolibrary.org/obo/GO_0005764 denotes lysosomes
T150 14110-14116 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T151 14231-14237 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T152 14241-14247 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes humans
T153 14259-14264 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T154 14285-14291 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T155 14320-14322 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T156 14519-14524 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T157 14802-14805 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T158 14834-14842 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T159 14843-14845 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T160 14944-14945 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T161 15205-15212 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T162 15302-15308 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T163 15362-15375 http://purl.obolibrary.org/obo/PR_000001393 denotes interleukin-6
T164 15493-15495 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T165 15654-15663 http://purl.obolibrary.org/obo/SO_0000418 denotes signaling
T166 15718-15728 http://purl.obolibrary.org/obo/UBERON_0000473 denotes is testing
T167 15829-15835 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T168 15955-15965 http://purl.obolibrary.org/obo/CLO_0001658 denotes activities
T169 15990-15991 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T170 16415-16420 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T171 16459-16464 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T172 16570-16575 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T173 16708-16711 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T174 16805-16806 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T175 16951-16959 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity
T176 16998-16999 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T177 17018-17019 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T178 17132-17134 http://purl.obolibrary.org/obo/CLO_0008285 denotes P1
T179 17227-17229 http://purl.obolibrary.org/obo/CLO_0008285 denotes P1
T180 17250-17255 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T181 17271-17272 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T182 17511-17512 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T183 17676-17678 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T184 17676-17678 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T185 17973-17974 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T186 18017-18018 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T187 18048-18049 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T188 18063-18065 http://purl.obolibrary.org/obo/CLO_0008285 denotes P1
T189 18320-18322 http://purl.obolibrary.org/obo/CLO_0008307 denotes P2
T190 18339-18340 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T191 18400-18406 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T192 18464-18470 http://purl.obolibrary.org/obo/UBERON_0001969 denotes plasma
T193 18494-18495 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T194 18542-18543 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T195 18694-18696 http://purl.obolibrary.org/obo/CLO_0008285 denotes P1
T196 18869-18874 http://purl.obolibrary.org/obo/CLO_0007836 denotes mouse
T197 18879-18884 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T198 19019-19023 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T199 19019-19023 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T200 19342-19352 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing is
T201 19465-19467 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T202 19465-19467 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T203 19666-19668 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T204 19666-19668 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T205 19670-19672 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T206 19673-19674 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T207 20249-20250 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T208 20261-20264 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T209 20442-20445 http://purl.obolibrary.org/obo/NCBITaxon_9397 denotes bat
T210 20498-20505 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T211 20511-20512 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T212 20612-20613 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T213 20656-20661 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T214 20684-20693 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T215 20731-20732 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T216 20800-20804 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T217 20800-20804 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T218 20850-20855 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T219 21006-21009 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T220 21033-21034 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T221 21083-21086 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T222 21173-21178 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T223 21274-21281 http://purl.obolibrary.org/obo/CLO_0009985 denotes focused
T224 21490-21491 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T225 21916-21922 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 58-62 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T2 677-691 Chemical denotes pharmaceutical http://purl.obolibrary.org/obo/CHEBI_52217
T3 939-943 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T4 1557-1562 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T5 1568-1572 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T6 1592-1597 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T7 1656-1660 Chemical denotes beta http://purl.obolibrary.org/obo/CHEBI_10545
T8 1780-1785 Chemical denotes alpha http://purl.obolibrary.org/obo/CHEBI_30216
T9 4661-4671 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T10 5178-5185 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T11 5210-5221 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T12 5295-5301 Chemical denotes serine http://purl.obolibrary.org/obo/CHEBI_17822
T13 5800-5813 Chemical denotes macromolecule http://purl.obolibrary.org/obo/CHEBI_33839
T14 5964-5971 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T15 6058-6066 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T16 7648-7650 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T18 7771-7778 Chemical denotes lactate http://purl.obolibrary.org/obo/CHEBI_24996
T19 7839-7846 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T20 7892-7894 Chemical denotes PT http://purl.obolibrary.org/obo/CHEBI_141395
T21 7910-7918 Chemical denotes creatine http://purl.obolibrary.org/obo/CHEBI_16919|http://purl.obolibrary.org/obo/CHEBI_57947
T23 8384-8386 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T24 8745-8756 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T25 8765-8768 Chemical denotes RAS http://purl.obolibrary.org/obo/CHEBI_63620
T26 8797-8808 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T27 8816-8827 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T28 8836-8850 Chemical denotes angiotensin II http://purl.obolibrary.org/obo/CHEBI_2719|http://purl.obolibrary.org/obo/CHEBI_48432|http://purl.obolibrary.org/obo/CHEBI_58506
T31 8836-8847 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T32 8848-8850 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T33 8860-8871 Chemical denotes vasodilator http://purl.obolibrary.org/obo/CHEBI_35620
T34 8872-8883 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T35 8911-8925 Chemical denotes angiotensin II http://purl.obolibrary.org/obo/CHEBI_2719|http://purl.obolibrary.org/obo/CHEBI_48432|http://purl.obolibrary.org/obo/CHEBI_58506
T38 8911-8922 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T39 8923-8925 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T40 8930-8941 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T41 8966-8980 Chemical denotes angiotensin II http://purl.obolibrary.org/obo/CHEBI_2719|http://purl.obolibrary.org/obo/CHEBI_48432|http://purl.obolibrary.org/obo/CHEBI_58506
T44 8966-8977 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T45 8978-8980 Chemical denotes II http://purl.obolibrary.org/obo/CHEBI_74067
T46 9014-9025 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T47 9048-9059 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T48 9330-9344 Chemical denotes ACE inhibitors http://purl.obolibrary.org/obo/CHEBI_35457
T49 9334-9344 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T50 9346-9350 Chemical denotes ACEI http://purl.obolibrary.org/obo/CHEBI_35457
T51 9355-9366 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T52 9473-9480 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T53 9606-9608 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T54 9750-9759 Chemical denotes androgens http://purl.obolibrary.org/obo/CHEBI_50113
T55 9788-9797 Chemical denotes estrogens http://purl.obolibrary.org/obo/CHEBI_50114
T56 10097-10101 Chemical denotes ACEI http://purl.obolibrary.org/obo/CHEBI_35457
T57 10348-10356 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T58 10416-10418 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T59 10447-10455 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T60 10532-10542 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T61 10532-10537 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T62 10538-10542 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T63 10559-10566 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T64 10650-10660 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T65 10650-10655 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T66 10656-10660 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T67 10663-10670 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T68 10739-10746 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T69 10769-10779 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T70 10769-10774 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T71 10775-10779 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T72 10782-10789 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T73 10850-10860 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T74 10850-10855 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T75 10856-10860 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T76 10874-10881 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T77 10901-10908 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T78 10969-10974 Chemical denotes lipid http://purl.obolibrary.org/obo/CHEBI_18059
T79 11027-11034 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T80 11077-11084 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T81 11118-11126 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T82 11812-11814 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T83 11846-11854 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T84 12183-12185 Chemical denotes S3 http://purl.obolibrary.org/obo/CHEBI_29388
T85 12190-12192 Chemical denotes S4 http://purl.obolibrary.org/obo/CHEBI_29401
T86 12230-12237 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T87 12803-12810 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T88 13472-13477 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T89 13549-13554 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T90 13604-13609 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T91 13649-13651 Chemical denotes S3 http://purl.obolibrary.org/obo/CHEBI_29388
T92 13656-13658 Chemical denotes S4 http://purl.obolibrary.org/obo/CHEBI_29401
T93 13692-13697 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T94 13841-13864 Chemical denotes HIV protease inhibitors http://purl.obolibrary.org/obo/CHEBI_35660
T95 13845-13864 Chemical denotes protease inhibitors http://purl.obolibrary.org/obo/CHEBI_37670|http://purl.obolibrary.org/obo/CHEBI_60258
T97 13854-13864 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T98 13865-13874 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T99 14083-14099 Chemical denotes antiviral agents http://purl.obolibrary.org/obo/CHEBI_22587
T100 14134-14143 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T101 14144-14154 Chemical denotes remdesivir http://purl.obolibrary.org/obo/CHEBI_145994
T102 14187-14191 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T103 14367-14377 Chemical denotes remdesivir http://purl.obolibrary.org/obo/CHEBI_145994
T104 14408-14413 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T105 14465-14479 Chemical denotes antiviral drug http://purl.obolibrary.org/obo/CHEBI_36044
T106 14465-14474 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587
T107 14475-14479 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T108 14480-14489 Chemical denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T109 14607-14614 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T110 14697-14701 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T111 15006-15014 Chemical denotes thiazide http://purl.obolibrary.org/obo/CHEBI_50264
T112 15016-15024 Chemical denotes thiazide http://purl.obolibrary.org/obo/CHEBI_50264
T113 15030-15039 Chemical denotes diuretics http://purl.obolibrary.org/obo/CHEBI_35498
T114 15041-15065 Chemical denotes calcium channel blockers http://purl.obolibrary.org/obo/CHEBI_38215
T115 15041-15048 Chemical denotes calcium http://purl.obolibrary.org/obo/CHEBI_22984|http://purl.obolibrary.org/obo/CHEBI_29320
T117 15067-15081 Chemical denotes ACE inhibitors http://purl.obolibrary.org/obo/CHEBI_35457
T118 15071-15081 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T119 15087-15098 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T120 15377-15379 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T122 15538-15548 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T123 15573-15584 Chemical denotes ruxolitinib http://purl.obolibrary.org/obo/CHEBI_66919
T124 15729-15738 Chemical denotes quinolone http://purl.obolibrary.org/obo/CHEBI_23765
T125 15740-15749 Chemical denotes macrolide http://purl.obolibrary.org/obo/CHEBI_25106
T126 15757-15763 Chemical denotes lactam http://purl.obolibrary.org/obo/CHEBI_24995
T127 15764-15775 Chemical denotes antibiotics http://purl.obolibrary.org/obo/CHEBI_33281
T128 15849-15854 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T129 15933-15938 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T130 16208-16213 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T131 16316-16324 Chemical denotes cysteine http://purl.obolibrary.org/obo/CHEBI_15356
T132 16373-16385 Chemical denotes polypeptides http://purl.obolibrary.org/obo/CHEBI_15841
T133 16402-16410 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T134 16515-16519 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T135 16638-16646 Chemical denotes molecule http://purl.obolibrary.org/obo/CHEBI_25367
T136 16807-16810 Chemical denotes Cys http://purl.obolibrary.org/obo/CHEBI_15356|http://purl.obolibrary.org/obo/CHEBI_17561|http://purl.obolibrary.org/obo/CHEBI_29950
T139 17030-17033 Chemical denotes Cys http://purl.obolibrary.org/obo/CHEBI_15356|http://purl.obolibrary.org/obo/CHEBI_17561|http://purl.obolibrary.org/obo/CHEBI_29950
T142 17042-17045 Chemical denotes Glu http://purl.obolibrary.org/obo/CHEBI_16015|http://purl.obolibrary.org/obo/CHEBI_18237|http://purl.obolibrary.org/obo/CHEBI_29972
T145 17046-17049 Chemical denotes Asp http://purl.obolibrary.org/obo/CHEBI_17053|http://purl.obolibrary.org/obo/CHEBI_22660|http://purl.obolibrary.org/obo/CHEBI_29958
T148 17121-17124 Chemical denotes Gln http://purl.obolibrary.org/obo/CHEBI_30011
T149 17132-17134 Chemical denotes P1 http://purl.obolibrary.org/obo/CHEBI_60949
T150 17203-17206 Chemical denotes Gly http://purl.obolibrary.org/obo/CHEBI_15428
T151 17208-17211 Chemical denotes Ala http://purl.obolibrary.org/obo/CHEBI_16977|http://purl.obolibrary.org/obo/CHEBI_46217
T153 17216-17219 Chemical denotes Ser http://purl.obolibrary.org/obo/CHEBI_17115|http://purl.obolibrary.org/obo/CHEBI_29999
T155 17227-17229 Chemical denotes P1 http://purl.obolibrary.org/obo/CHEBI_60949
T156 17372-17382 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T157 17513-17527 Chemical denotes peptidomimetic http://purl.obolibrary.org/obo/CHEBI_63175
T158 17540-17549 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T159 17676-17678 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T160 17753-17761 Chemical denotes hydrogen http://purl.obolibrary.org/obo/CHEBI_49637
T161 17835-17844 Chemical denotes aldehydes http://purl.obolibrary.org/obo/CHEBI_17478
T162 17903-17908 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T163 17926-17929 Chemical denotes Cys http://purl.obolibrary.org/obo/CHEBI_15356|http://purl.obolibrary.org/obo/CHEBI_17561|http://purl.obolibrary.org/obo/CHEBI_29950
T166 18038-18044 Chemical denotes lactam http://purl.obolibrary.org/obo/CHEBI_24995
T167 18063-18065 Chemical denotes P1 http://purl.obolibrary.org/obo/CHEBI_60949
T168 18075-18084 Chemical denotes glutamine http://purl.obolibrary.org/obo/CHEBI_28300
T169 18320-18322 Chemical denotes P2 http://purl.obolibrary.org/obo/CHEBI_33472
T170 18323-18328 Chemical denotes amide http://purl.obolibrary.org/obo/CHEBI_29337|http://purl.obolibrary.org/obo/CHEBI_32988
T172 18341-18349 Chemical denotes pyridone http://purl.obolibrary.org/obo/CHEBI_38183
T173 18694-18696 Chemical denotes P1 http://purl.obolibrary.org/obo/CHEBI_60949
T174 18986-18988 Chemical denotes CD http://purl.obolibrary.org/obo/CHEBI_8673
T175 19293-19308 Chemical denotes Mpro inhibitors http://purl.obolibrary.org/obo/CHEBI_147285
T176 19298-19308 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T177 19392-19415 Chemical denotes SARS-CoV Mpro inhibitor http://purl.obolibrary.org/obo/CHEBI_147285
T178 19406-19415 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T179 19448-19450 Chemical denotes AG http://purl.obolibrary.org/obo/CHEBI_27569|http://purl.obolibrary.org/obo/CHEBI_40618|http://purl.obolibrary.org/obo/CHEBI_73757
T182 19465-19467 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T183 19543-19553 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T184 19566-19580 Chemical denotes peptidomimetic http://purl.obolibrary.org/obo/CHEBI_63175
T185 19589-19597 Chemical denotes acceptor http://purl.obolibrary.org/obo/CHEBI_15339
T186 19632-19641 Chemical denotes inhibitor http://purl.obolibrary.org/obo/CHEBI_35222
T187 19666-19668 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T188 19880-19882 Chemical denotes EM http://purl.obolibrary.org/obo/CHEBI_73507
T189 20088-20098 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222
T190 20107-20117 Chemical denotes remdesivir http://purl.obolibrary.org/obo/CHEBI_145994
T191 20733-20737 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T192 21910-21915 Chemical denotes drugs http://purl.obolibrary.org/obo/CHEBI_23888
T193 21927-21931 Chemical denotes drug http://purl.obolibrary.org/obo/CHEBI_23888
T194 21988-21998 Chemical denotes inhibitors http://purl.obolibrary.org/obo/CHEBI_35222

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 1226-1235 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T2 7037-7070 Phenotype denotes lower respiratory tract infection http://purl.obolibrary.org/obo/HP_0002783
T3 7082-7089 Phenotype denotes hypoxia http://purl.obolibrary.org/obo/HP_0012418
T4 7154-7174 Phenotype denotes respiratory distress http://purl.obolibrary.org/obo/HP_0002098
T5 7255-7277 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T6 7279-7296 Phenotype denotes diabetes mellitus http://purl.obolibrary.org/obo/HP_0000819
T7 7298-7310 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T8 7312-7332 Phenotype denotes chronic lung disease http://purl.obolibrary.org/obo/HP_0006528
T9 7334-7340 Phenotype denotes cancer http://purl.obolibrary.org/obo/HP_0002664
T10 7342-7364 Phenotype denotes chronic kidney disease http://purl.obolibrary.org/obo/HP_0012622
T11 7370-7377 Phenotype denotes obesity http://purl.obolibrary.org/obo/HP_0001513
T12 7546-7571 Phenotype denotes cytokine release syndrome http://purl.obolibrary.org/obo/HP_0033041
T13 7582-7596 Phenotype denotes cytokine storm http://purl.obolibrary.org/obo/HP_0033041
T14 7725-7736 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888
T15 7742-7769 Phenotype denotes elevations in liver enzymes http://purl.obolibrary.org/obo/HP_0002910
T16 7944-7963 Phenotype denotes acute kidney injury http://purl.obolibrary.org/obo/HP_0001919
T17 8072-8081 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T18 9233-9245 Phenotype denotes hypertension http://purl.obolibrary.org/obo/HP_0000822
T19 14777-14800 Phenotype denotes pancreatic inflammation http://purl.obolibrary.org/obo/HP_0001733

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 219-228 http://purl.obolibrary.org/obo/GO_0016032 denotes virulence
T2 219-228 http://purl.obolibrary.org/obo/GO_0009405 denotes virulence
T3 3415-3424 http://purl.obolibrary.org/obo/GO_0016032 denotes virulence
T4 3415-3424 http://purl.obolibrary.org/obo/GO_0009405 denotes virulence
T5 5378-5389 http://purl.obolibrary.org/obo/GO_0006897 denotes endocytosis
T6 5397-5412 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion
T7 5417-5428 http://purl.obolibrary.org/obo/GO_0006897 denotes endocytosis
T8 5845-5858 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T9 5964-5983 http://purl.obolibrary.org/obo/GO_0006412 denotes protein translation
T10 6256-6267 http://purl.obolibrary.org/obo/GO_0006810 denotes transported
T11 6325-6335 http://purl.obolibrary.org/obo/GO_0006887 denotes exocytosis
T12 6631-6653 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T13 6638-6653 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T14 6830-6852 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T15 6837-6852 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T16 7480-7495 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T17 8484-8494 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T18 8701-8710 http://purl.obolibrary.org/obo/GO_0016032 denotes virulence
T19 8701-8710 http://purl.obolibrary.org/obo/GO_0009405 denotes virulence
T20 8989-9005 http://purl.obolibrary.org/obo/GO_0042310 denotes vasoconstriction
T21 9812-9822 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T22 10624-10640 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses
T23 11415-11424 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T24 11702-11719 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T25 11702-11719 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication
T26 11866-11881 http://purl.obolibrary.org/obo/GO_0016032 denotes Viral Infection
T27 14788-14800 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation
T28 15654-15672 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T29 15654-15663 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T30 17960-17969 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T31 19024-19031 http://purl.obolibrary.org/obo/GO_0009606 denotes tropism

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-9 Sentence denotes COVID-19:
T2 10-41 Sentence denotes Living through Another Pandemic
T3 43-51 Sentence denotes Abstract
T4 52-202 Sentence denotes Novel beta-coronavirus SARS-CoV-2 is the pathogenic agent responsible for coronavirus disease-2019 (COVID-19), a globally pandemic infectious disease.
T5 203-334 Sentence denotes Due to its high virulence and the absence of immunity among the general population, SARS-CoV-2 has quickly spread to all countries.
T6 335-523 Sentence denotes This pandemic highlights the urgent unmet need to expand and focus our research tools on what are considered “neglected infectious diseases” and to prepare for future inevitable pandemics.
T7 524-756 Sentence denotes This global emergency has generated unprecedented momentum and scientific efforts around the globe unifying scientists from academia, government and the pharmaceutical industry to accelerate the discovery of vaccines and treatments.
T8 757-1074 Sentence denotes Herein, we shed light on the virus structure and life cycle and the potential therapeutic targets in SARS-CoV-2 and briefly refer to both active and passive immunization modalities, drug repurposing focused on speed to market, and novel agents against specific viral targets as therapeutic interventions for COVID-19.
T9 1076-1587 Sentence denotes As first reported in December 2019, a novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), caused an outbreak of atypical pneumonia in Wuhan, China, that has since spread globally.1 The disease caused by this new virus has been named coronavirus disease-2019 (COVID-19) and on March 11, 2020 was declared a global pandemic by the World Health Organization (WHO).1 Currently, there are seven known human coronaviruses classified into two broad genera of alpha- and beta-coronaviruses.
T10 1588-2794 Sentence denotes The alpha-coronaviruses comprise HCoV-NL63 and HCoV-229E, while the beta-coronaviruses comprise HCoV-OC43, HCoV-HKU1, SARS, Middle East Respiratory Syndrome virus (MERS), and SARS-CoV-2.2 The alpha-coronaviruses and HCoV-OC43 and HCoV-HKU1 are among the causes of the common cold and have been circulating in human and animal populations for many years.2 All these viruses originate from a common ancestor and enter the human population through zoonotic transfer or species jumping.3 Although the first four known human coronaviruses originated from birds, SARS, MERS, and SARS-CoV-2 appear, on the basis of gene sequence analysis, to have originated from bats.4 However, in each case, these more recent viruses appear to have been transmitted through an intermediate host such as a civet, a small nocturnal mammal native to tropical Asia and Africa (SARS), a camel (MERS), or a pangolin (SARS-CoV-2) after acquiring additional mutations.2 Bats harbor more strains of coronavirus than other mammals, estimated to range from 5000 to 10,000 distinct subtypes.5 Therefore, additional epidemics are highly likely to occur in the future due to the abundant number of coronaviruses present in the bat population.
T11 2795-2969 Sentence denotes As of May 6th, 2020, more than 3.7 million cases of SARS-CoV-2 positive patients have been reported worldwide with over 260,000 deaths, reflecting a ∼6.8% case fatality rate.
T12 2970-3484 Sentence denotes While the infection fatality rate is currently unknown, and likely to be lower than the current case fatality rate, estimates suggest it is close to 1%, or approximately 10 times the infection fatality rate of seasonal influenza (flu), which is fatal in only ∼0.1% of infected patients.6 In contrast to previous coronavirus epidemics (Table S1), COVID-19 is indiscriminately wreaking havoc globally with no apparent end in sight due to its high virulence and the absence of resistance among the general population.
T13 3485-3563 Sentence denotes In general, all pandemics pass through three phases until they become endemic.
T14 3564-3733 Sentence denotes The first phase of “seeding” or slow spread is often not noticed early enough, leading to dissemination of the disease before effective countermeasures can be initiated.
T15 3734-3927 Sentence denotes During the second phase, there is a rapid increase in cases until a peak occurs in the number of infected individuals; parallel efforts to control and contain the virus can mitigate this phase.
T16 3928-4041 Sentence denotes In the third phase, the infection rate curve will start to decrease until the disease becomes extinct or endemic.
T17 4042-4238 Sentence denotes The kinetics of increase and decrease in the rate of infections can vary significantly between populations depending on the use of preventive measures and the availability of effective treatments.
T18 4239-4465 Sentence denotes Previous coronavirus outbreaks and the current pandemic highlight the urgent unmet medical need to expand and focus our research tools on these long neglected infectious diseases and to prepare for future inevitable pandemics.
T19 4466-4707 Sentence denotes Herein, we briefly recap the current and potential future therapeutic interventions for SARS-CoV-2 and highlight the recently published crystal structures of the SARS-CoV-2 main protease and its inhibitors as novel agents against SARS-CoV-2.
T20 4709-4739 Sentence denotes Virus Structure and Life Cycle
T21 4740-4823 Sentence denotes SARS-CoV-2 is an enveloped, nonsegmented single stranded, positive sense RNA virus.
T22 4824-4938 Sentence denotes It has one of the largest genomes among all RNA viruses, comprising approximately 30 kilobases (kb) (NC_045512.2).
T23 4939-5529 Sentence denotes SARS-CoV and SARS-CoV-2 belong to the same Coronaviridae family that also includes the highly fatal Middle East Respiratory Syndrome virus (MERS) that appeared in 2012.7 SARS-CoV-2 enters cells through the interaction of its surface Spike protein with the host receptor, angiotensin-converting enzyme 2 (ACE2).8 Subsequent proteolytic cleavage by the host serine protease TMPRSS2 or perhaps other proteases allows subsequent cell entry by endocytosis.8 Upon membrane fusion and endocytosis, the viral nucleocapsid with its genome payload is released into the cytoplasm of the infected cell.
T24 5530-6371 Sentence denotes Following its release into the host cell, the virus usurps portions of the endoplasmic reticulum to form numerous double membrane vesicles.9 These vesicles are perfect sanctuaries to protect the viral genome and allow an efficient replication process to occur through a macromolecule complex called the replication–transcription complex (RTC).10 The viral genome is subsequently translated into viral polyproteins using the host cell protein translation machinery, which are then cleaved into structural and nonstructural viral proteins by two viral proteases, Mpro and PLpro.11 This step is followed by the assembly of viral particles (virions) in the endoplasmic reticulum/golgi compartment.12 The packaged virions are then transported to the cell surface, are released from the cells through exocytosis, and proceed to infect other cells.
T25 6373-6413 Sentence denotes Clinical Course and Outcomes of COVID-19
T26 6414-6654 Sentence denotes SARS-CoV-2 likely binds to epithelial cells in the nasal cavity during the asymptomatic state of the disease (initial 1–2 days of infection) where there might be some local propagation of the virus but with a limited innate immune response.
T27 6655-6853 Sentence denotes Within the next few days the infection starts in the upper airway and during this stage the infection can be detected by nasal swabs or sputum as well as early markers of the innate immune response.
T28 6854-7107 Sentence denotes About 80% of infected patients show mild symptoms that are mostly restricted to the upper and conducting airways.13 However, about 20% of infected patients will progress to develop a lower respiratory tract infection leading to hypoxia, and lung damage.
T29 7108-7218 Sentence denotes These patients are liable to succumb to acute respiratory distress syndrome (ARDS), which is frequently fatal.
T30 7219-8387 Sentence denotes Patients with comorbidities such as cardiovascular disease, diabetes mellitus, hypertension, chronic lung disease, cancer, chronic kidney disease, and obesity (body mass index ≥30) and ARDS are at increased risk of death.14 The available data indicate that the viral infection can produce an excessive immune reaction known as cytokine release syndrome (CRS) or “cytokine storm” associated with elevated levels of interleukin-6 (IL-6).15 Laboratory findings associated with worse clinical outcomes include lymphopenia, and elevations in liver enzymes, lactate dehydrogenase (LDH), inflammatory markers (e.g., C-reactive protein [CRP], ferritin), d-dimer, prothrombin time (PT), troponin and creatine phosphokinase (CPK), and acute kidney injury.15 Chest CT scans in patients with COVID-19 commonly show ground-glass opacification, consistent with viral pneumonia with abnormalities more likely to be bilateral with a peripheral distribution involving the lower lobes.16 While SARS-CoV-2 entry is dependent on ACE2 in lung cells,8 ACE2 expression is not exclusive to the lungs, and higher relative ACE2 expression is observed in heart, kidney, GIT, and testes (Gene ID:
T31 8388-8395 Sentence denotes 59272).
T32 8396-8553 Sentence denotes The organ- and cell-specific expression of ACE2 suggests that it may play a role in the regulation of cardiovascular and renal function as well as fertility.
T33 8554-9609 Sentence denotes Surprisingly, the 2003 SARS-CoV infection was shown to downregulate the expression of ACE2 in lung tissue reducing transmissibility but increasing virulence.17 ACE2, a component of the renin-angiotensin system (RAS), catalyzes the cleavage of angiotensin I into angiotensin 1–9 and angiotensin II into the vasodilator angiotensin 1–7.18 The balance between angiotensin II and angiotensin (1–7) is critical since angiotensin II elicits vasoconstriction via the angiotensin AT1 receptor, whereas angiotensin (1–7) exerts a vasodilatory effect mediated by AT2 with multiple beneficial effects on the cardiovascular and respiratory system.18 While ACE2 appears to be involved in the hypertension and respiratory manifestations of severely ill patients, the benefits and merits of ACE inhibitors (ACEI) or angiotensin receptor 1 blockers (ARBs) in the SARS-CoV-2 patient is still controversial.18 The priming of the S viral protein by TMPRSS2 is crucial for viral entry where TMPRSS2 expression is very high in the lungs, kidneys, and prostate tissue (Gene ID:
T34 9610-9798 Sentence denotes 7113).8 TMPRSS2 is predominantly expressed in the luminal cells of the prostate epithelium, where its expression is regulated positively by androgens and negatively regulated by estrogens.
T35 9799-9997 Sentence denotes The hormonal regulation of TMPRSS2 has been suggested to be linked to the fact that men are at higher risk than women to become seriously ill with COVID-19.19 TMPRSS2 knockout in mice is not lethal.
T36 9998-10286 Sentence denotes In contrast, humans are intolerant to the loss of function of ACE2.19 Concerns about the effect of ACEI and AT receptor blockers in COVID-19 patients are actively being investigated in the clinic, with the most recent reports offering encouragement that they may have a beneficial effect.
T37 10288-10310 Sentence denotes Potential Drug Targets
T38 10311-10641 Sentence denotes SARS-CoV-2 viral RNA encodes several proteins that are potentially druggable targets (Figure 1 and Table S2), including four structural proteins: the Spike (S), Envelope (E), Membrane (M), and Nucleocapsid (N).1 The 1273 amino acid, 141 kDa, Spike protein is heavily N-glycosylated and is a major inducer of host immune responses.
T39 10642-10761 Sentence denotes The 222 amino acid M protein has three transmembrane domains and is the most abundant structural protein in the virion.
T40 10762-10841 Sentence denotes The 75 amino acid E protein is important for assembly and release of the virus.
T41 10842-11019 Sentence denotes The 419 amino acid nucleocapsid protein forms a protective protein shell around the virus genetic material and is encased in a lipid envelope that is usurped from the host cell.
T42 11020-11085 Sentence denotes Matrix protein connects the membrane to the nucleocapsid protein.
T43 11086-11399 Sentence denotes There are also 16 nonstructural proteins (nsp1–16)1 including several for which there are X-ray crystallography-derived structural data: RNA dependent RNA polymerase (nsp12, RdRp), a papain-like protease (nsp3, PLpro), the main protease (nsp5, 3CLpro, or Mpro), and exonuclease/N7-methyltransferase (nsp14, ExoN).
T44 11400-11517 Sentence denotes RdRp catalyzes synthesis of the full length negative-strand RNA template used by RdRp to make more viral genomic RNA.
T45 11518-11816 Sentence denotes The SARS-CoV-2 genome also contains a number of open reading frames (ORFs): namely, ORF 1a proposed to encode nsp1 to nsp11; ORF1b, is proposed to encode nsp12 to nsp16, essential for viral replication, and ORFs 3a, 3b, 6, 7a, 7b, 8, 9a, 9b, and 10, which encode for accessory proteins1 (Table S2).
T46 11817-11855 Sentence denotes Figure 1 SARS-CoV-2 encoded proteins.
T47 11857-11881 Sentence denotes Treating Viral Infection
T48 11883-11914 Sentence denotes Immunization against SARS-CoV-2
T49 11915-12002 Sentence denotes The development of a manufacturable, safe, and effective vaccine may take 12–18 months.
T50 12003-12194 Sentence denotes Several phase I clinical trials are currently recruiting participants to test the safety, reactogenicity, and immunogenicity of several investigational SARS-CoV-2 vaccines (Tables S3 and S4).
T51 12195-12354 Sentence denotes An mRNA vaccine based on the Spike protein began human clinical trials within a record 63 days from first publication of the SARS-CoV-2 sequence (NCT04283461).
T52 12355-12742 Sentence denotes It has been suggested that the mutation rate for SARS-CoV-2 is expected to be low, raising hope that a successful vaccine will provide life-long immunity.20 Hyperimmune globulin isolated from the sera of convalescent patients having high titers of antibodies against SARS-CoV-2 or even their whole blood may provide instant “passive” short-lived immunity mainly via viral neutralization.
T53 12743-12937 Sentence denotes Antibody dependent therapy, for example targeting the Spike protein might represent the most efficient, near-term therapeutic intervention if regulatory and safety requirements can be addressed.
T54 12938-13210 Sentence denotes With over 1.3 million positive cases of COVID-19 in the US based solely on the results of RNA molecular tests, large-scale antibody testing should be expedited to identify individuals who have been exposed to the virus but were never officially confirmed to have COVID-19.
T55 13211-13401 Sentence denotes An understanding what levels of antibody confer immunity postinfection could be used to determine who may be less likely to transmit the virus and thus may be able to go back safely to work.
T56 13403-13419 Sentence denotes Drug Repurposing
T57 13420-13499 Sentence denotes Developing highly selective SARS-CoV-2 specific new drugs will take many years.
T58 13500-13821 Sentence denotes Alternatively, repurposing of existing, approved drugs can present a more rapid strategy to identifying drugs effective in treating COVID-19 (Tables S3 and S4 and Figure S1).11 Repurposing of drugs that would block SARS-CoV-2 entry and/or replication are urgently needed to mitigate the symptomatic burden of the disease.
T59 13822-14074 Sentence denotes Unfortunately, the HIV protease inhibitors ritonavir/liponavir failed to show efficacy in SARS-CoV-2 infected patients.21 Hydroxychloroquine, which may act by increasing the pH within lysosomes, was granted FDA authorization for use in emergency cases.
T60 14075-14401 Sentence denotes Several antiviral agents are being tested such as the RdRp inhibitor remdesivir and the approved anti-influenza drug faviprivir.8 Remdesivir was previously tested in humans with Ebola virus disease and also in animal models of MERS and SARS-CoV.11 At least six clinical trials are evaluating remdesivir in SARS-CoV-2 patients.
T61 14402-14490 Sentence denotes Other drugs that might inhibit RdRp include the broad-spectrum antiviral drug ribavirin.
T62 14491-14596 Sentence denotes RdRp conservation among RNA virus families makes it an exciting target for the discovery of newer agents.
T63 14597-14722 Sentence denotes The Spike protein, ACE2, and TMPRSS2 may also represent interesting therapeutic targets for current drug repurposing efforts.
T64 14723-15143 Sentence denotes Camostat mesylate, approved in Japan for treatment of pancreatic inflammation, has been shown to block TMPRSS2 activity.22 Arbidol, which is hypothesized to block Spike/ACE2 binding, is being investigated clinically, and a clinical trial was recently launched to study the effect of thiazide, thiazide-like diuretics, calcium channel blockers, ACE inhibitors, and angiotensin receptor blockers in COVID-19 (NCT04330300).
T65 15144-15323 Sentence denotes The availability of soluble recombinant hACE2 encouraged its testing in two clinical trials; although one was terminated (NCT04287686) the other is currently active (NCT04335136).
T66 15324-15673 Sentence denotes Monoclonal antibodies, especially for interleukin-6 (IL-6) or its receptor, are also being considered for the control of SARS-CoV-2 associated respiratory exacerbations.11 Interestingly, several Janus Kinase (JAK) inhibitors such as baricitinib and ruxolitinib are currently being evaluated given their involvement in interleukin signaling pathways.
T67 15674-15807 Sentence denotes Another currently recruiting clinical trial is testing quinolone, macrolide, and β-lactam antibiotics against COVID-19 (NCT02735707).
T68 15808-15918 Sentence denotes Multiple groups have tested FDA approved drugs in various in vitro assays as well as in computational screens.
T69 15919-16282 Sentence denotes Many of these drugs show inhibitory activities, although not always at a concentration that may be safely achieved in patients.23 Controlled clinical trials of these agents are mandatory to assess their efficacy and safety without creating false positive hope or depleting the supplies of drugs needed to treat the diseases for which they were initially approved.
T70 16284-16296 Sentence denotes Novel Agents
T71 16297-17240 Sentence denotes Mpro and PLpro are cysteine proteases responsible for the cleavage of viral polypeptides into functional proteins for virus replication and packaging within host cells.24 These enzymes represent the best characterized drug targets among coronaviruses and are currently the focus of attention among scientists seeking novel coronavirus small molecule therapeutics.25 Mpro is shared by all coronavirus genera and has similarity to the 3Cpro of the Enterovirus genus in the picornavirus family.24 Mpro contains a Cys···His catalytic dyad with an additional α-helical domain involved in the dimerization of the protease, which is essential for its catalytic activity.25 The enteroviral 3Cpro functions as a monomer featuring a classical Cys···His···Glu/Asp catalytic triad.24 Yet, they share the almost absolute requirement for Gln in the P1 position of the substrate and space for only small residues such as Gly, Ala, or Ser in the P1′ position.
T72 17241-17989 Sentence denotes Since no human proteases with a similar cleavage specificity are known, it may be possible to identify highly selective Mpro/3Cpro inhibitors, which display minimal inhibition of host proteases.26 The 3-D structures of unliganded SARS-CoV-2 Mpro and of its complex with a peptidomimetic α-ketoamide inhibitor (11r) have been solved26 and were used to support the design of an optimized derivative (13b) through docking studies (Figure S2). α-Ketoamides can interact with the catalytic center of Mpro through two hydrogen bonding interactions rather than only one as with other warheads such as aldehydes or Michael acceptors.24 Nucleophilic attack of the α-keto group by the catalytic Cys residue results in reversible formation of a thiohemiketal.
T73 17990-18365 Sentence denotes These α-ketoamides feature a 5-membered rigid γ-lactam as a mimic of the P1 residue, glutamine, required for Mpro specificity, with the advantage of reducing the loss of entropy upon binding.24 Follow up optimization efforts guided by docking to the SARS-CoV-2 Mpro co-crystal structure with 11r, included incorporation of the P3-P2 amide bond into a pyridone ring as in 13a.
T74 18366-18558 Sentence denotes The resulting half-life of 13a in plasma was enhanced by 3 fold relative to 11r, in vitro kinetic plasma solubility improved by a factor of ∼19 and thermodynamic solubility by a factor of ∼13.
T75 18559-18807 Sentence denotes 13a inhibited purified recombinant SARS-CoV-2 Mpro, SARS-CoV Mpro, and MERS-CoV Mpro in the submicromolar range.26 Modification of the P1′ and P3 moieties of 13a afforded an optimized derivative 13b which was crystallized with SARS-CoV-2 Mpro (PDB:
T76 18808-18823 Sentence denotes 6Y2G and 6Y2F).
T77 18824-18896 Sentence denotes Both 13a and 13b displayed good stability in mouse and human microsomes.
T78 18897-18996 Sentence denotes 13b (3 mg/kg) showed longer t1/2, tmax, and residence time compared to 13a (20 mg/kg) in CD-1 mice.
T79 18997-19066 Sentence denotes Both compounds showed lung tropism which is thought to be beneficial.
T80 19067-19309 Sentence denotes While the development of these ketoamides into clinical candidates requires additional safety studies, the availability of their crystal structures is of great importance in facilitating the discovery and development of other Mpro inhibitors.
T81 19310-19469 Sentence denotes One of the suggested agents for testing is the previously reported Rhinovirus and SARS-CoV Mpro inhibitor clinical candidate rupintrivir (AG-7088) (Figure S2).
T82 19470-19606 Sentence denotes In addition, other groups recently reported Mpro crystal structures with inhibitors such as the peptidomimetic Michael acceptor N3 (PDB:
T83 19607-19651 Sentence denotes 6LU7) and the reversible inhibitor X77 (PDB:
T84 19652-19870 Sentence denotes 6W63) (Figure S2).27 A large array of Mpro crystal structures with multiple covalent and noncovalent fragments were solved through an exceptionally large screen with vast opportunities for fragment growing and merging.
T85 19871-20132 Sentence denotes The cryo EM structure of SARS-CoV-2 RdRp was recently solved, showing nearly an identical sequence to its SARS-CoV homologue.28 RdRp should be another high priority target for therapeutic intervention given that lead inhibitors such as remdesivir already exist.
T86 20134-20145 Sentence denotes Conclusions
T87 20146-20308 Sentence denotes Since 2003, the three pandemics caused by SARS, MERS, and SARS-CoV-2 are believed to have initiated as a result of bat coronaviruses crossing the species barrier.
T88 20309-20457 Sentence denotes Therefore, other epidemics are likely to occur in the future due to the effectively unlimited supply of coronaviruses present in the bat population.
T89 20458-20717 Sentence denotes Equally concerning is the fact that RNA viruses lack a genomic proof-reading mechanism and therefore are prone to mutation, raising the specter that once a new coronavirus begins circulating in the human population it will be extremely difficult to eliminate.
T90 20718-20856 Sentence denotes Finally, for a drug to be most effective, it must reach its site of action (e.g., lung tissues) in sufficient quantity to clear the virus.
T91 20857-21060 Sentence denotes With nearly three million reported cases, >260,000 deaths, millions out of work, and billions of dollars in lost revenue, it appears that SARS-CoV-2 has altered daily life for a sustained period of time.
T92 21061-21179 Sentence denotes This cascading effect has generated unprecedented momentum and scientific effort around the globe to fight this virus.
T93 21180-21420 Sentence denotes Success will require creative thinking, new technologies, innovative approaches, particularly focused on speed to market, and combinations of different modalities to effectively combat not just the current foe but also future coronaviruses.
T94 21421-21515 Sentence denotes We remain hopeful that we will be more prepared for the emergence of a potential “SARS-CoV-3”.
T95 21517-21549 Sentence denotes Supporting Information Available
T96 21550-22046 Sentence denotes The Supporting Information is available free of charge at https://pubs.acs.org/doi/10.1021/acsinfecdis.0c00224.Tables showing viral outbreaks since year 2000, different targets expressed in SARS-CoV-2 proteome, unique therapeutic interventions in recruiting and nonrecruiting clinical studies for COVID-19, and structures of select approved or investigational drugs tested for drug repurposing against SARS-CoV-2; structures of the novel inhibitors obtained from the PDB for SARS-CoV-2 Mpro (PDF)
T97 22048-22070 Sentence denotes Supplementary Material
T98 22071-22091 Sentence denotes id0c00224_si_001.pdf
T99 22093-22145 Sentence denotes The authors declare no competing financial interest.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 0-8 Disease denotes COVID-19 MESH:C000657245
11 58-74 Species denotes beta-coronavirus Tax:694002
12 75-85 Species denotes SARS-CoV-2 Tax:2697049
13 287-297 Species denotes SARS-CoV-2 Tax:2697049
14 858-868 Species denotes SARS-CoV-2 Tax:2697049
15 126-150 Disease denotes coronavirus disease-2019 MESH:C000657245
16 152-160 Disease denotes COVID-19 MESH:C000657245
17 183-201 Disease denotes infectious disease MESH:D003141
18 455-474 Disease denotes infectious diseases MESH:D003141
19 1065-1073 Disease denotes COVID-19 MESH:C000657245
54 1114-1131 Species denotes novel coronavirus Tax:2697049
55 1133-1180 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
56 1182-1192 Species denotes SARS-CoV-2 Tax:2697049
57 1501-1506 Species denotes human Tax:9606
58 1507-1520 Species denotes coronaviruses Tax:11118
59 1568-1586 Species denotes beta-coronaviruses Tax:694002
60 1598-1611 Species denotes coronaviruses Tax:11118
61 1621-1630 Species denotes HCoV-NL63 Tax:277944
62 1635-1644 Species denotes HCoV-229E Tax:11137
63 1656-1674 Species denotes beta-coronaviruses Tax:694002
64 1684-1693 Species denotes HCoV-OC43 Tax:31631
65 1695-1704 Species denotes HCoV-HKU1 Tax:290028
66 1763-1773 Species denotes SARS-CoV-2 Tax:2697049
67 1786-1799 Species denotes coronaviruses Tax:11118
68 1804-1813 Species denotes HCoV-OC43 Tax:31631
69 1818-1827 Species denotes HCoV-HKU1 Tax:290028
70 1897-1902 Species denotes human Tax:9606
71 2008-2013 Species denotes human Tax:9606
72 2102-2107 Species denotes human Tax:9606
73 2108-2121 Species denotes coronaviruses Tax:11118
74 2161-2171 Species denotes SARS-CoV-2 Tax:2697049
75 2396-2402 Species denotes mammal Tax:9606
76 2448-2453 Species denotes camel Tax:9837
77 2477-2487 Species denotes SARS-CoV-2 Tax:2697049
78 2556-2567 Species denotes coronavirus Tax:11118
79 2750-2763 Species denotes coronaviruses Tax:11118
80 1226-1235 Disease denotes pneumonia MESH:D011014
81 1338-1362 Disease denotes coronavirus disease-2019 MESH:C000657245
82 1364-1372 Disease denotes COVID-19 MESH:C000657245
83 1752-1756 Disease denotes MERS MESH:D018352
84 1863-1867 Disease denotes cold MESH:D000067390
85 2033-2050 Disease denotes zoonotic transfer MESH:D015047
86 2151-2155 Disease denotes MERS MESH:D018352
87 2455-2459 Disease denotes MERS MESH:D018352
97 2847-2857 Species denotes SARS-CoV-2 Tax:2697049
98 2867-2875 Species denotes patients Tax:9606
99 3247-3255 Species denotes patients Tax:9606
100 3282-3293 Species denotes coronavirus Tax:11118
101 2923-2929 Disease denotes deaths MESH:D003643
102 2980-2989 Disease denotes infection MESH:D007239
103 3153-3162 Disease denotes infection MESH:D007239
104 3238-3246 Disease denotes infected MESH:D007239
105 3316-3324 Disease denotes COVID-19 MESH:C000657245
114 4248-4259 Species denotes coronavirus Tax:11118
115 4554-4564 Species denotes SARS-CoV-2 Tax:2697049
116 4628-4638 Species denotes SARS-CoV-2 Tax:2697049
117 4696-4706 Species denotes SARS-CoV-2 Tax:2697049
118 3831-3839 Disease denotes infected MESH:D007239
119 3952-3961 Disease denotes infection MESH:D007239
120 4095-4105 Disease denotes infections MESH:D007239
121 4398-4417 Disease denotes infectious diseases MESH:D003141
138 5210-5241 Gene denotes angiotensin-converting enzyme 2 Gene:59272
139 5243-5247 Gene denotes ACE2 Gene:59272
140 5311-5318 Gene denotes TMPRSS2 Gene:7113
141 6091-6095 Gene denotes Mpro Gene:8673700
142 5651-5659 Gene denotes membrane Gene:43740571
143 5397-5405 Gene denotes membrane Gene:43740571
144 5172-5177 Gene denotes Spike Gene:43740568
145 5440-5452 Gene denotes nucleocapsid Gene:43740575
146 4740-4750 Species denotes SARS-CoV-2 Tax:2697049
147 4939-4947 Species denotes SARS-CoV Tax:694009
148 4952-4962 Species denotes SARS-CoV-2 Tax:2697049
149 4982-4995 Species denotes Coronaviridae Tax:11118
150 5109-5119 Species denotes SARS-CoV-2 Tax:2697049
151 5295-5301 Chemical denotes serine MESH:D012694
152 5079-5083 Disease denotes MERS MESH:D018352
153 5515-5523 Disease denotes infected MESH:D007239
155 6405-6413 Disease denotes COVID-19 MESH:C000657245
227 7633-7646 Gene denotes interleukin-6 Gene:3569
228 7648-7652 Gene denotes IL-6 Gene:3569
229 7828-7846 Gene denotes C-reactive protein Gene:1401
230 7848-7851 Gene denotes CRP Gene:1401
231 8228-8232 Gene denotes ACE2 Gene:59272
232 8249-8253 Gene denotes ACE2 Gene:59272
233 8316-8320 Gene denotes ACE2 Gene:59272
234 8439-8443 Gene denotes ACE2 Gene:59272
235 8640-8644 Gene denotes ACE2 Gene:59272
236 8714-8718 Gene denotes ACE2 Gene:59272
237 8797-8831 Gene denotes angiotensin I into angiotensin 1–9
238 8836-8850 Gene denotes angiotensin II Gene:183
239 8872-8887 Gene denotes angiotensin 1–7
240 8911-8925 Gene denotes angiotensin II Gene:183
241 9198-9202 Gene denotes ACE2 Gene:59272
242 9330-9333 Gene denotes ACE Gene:1636
243 9484-9491 Gene denotes TMPRSS2 Gene:7113
244 9525-9532 Gene denotes TMPRSS2 Gene:7113
245 9618-9625 Gene denotes TMPRSS2 Gene:7113
246 9826-9833 Gene denotes TMPRSS2 Gene:7113
247 9958-9965 Gene denotes TMPRSS2 Gene:50528
248 10060-10064 Gene denotes ACE2 Gene:59272
249 8966-8980 Gene denotes angiotensin II Gene:183
250 9465-9466 Gene denotes S Gene:43740568
251 6414-6424 Species denotes SARS-CoV-2 Tax:2697049
252 6876-6884 Species denotes patients Tax:9606
253 7001-7009 Species denotes patients Tax:9606
254 7114-7122 Species denotes patients Tax:9606
255 7219-7227 Species denotes Patients Tax:9606
256 7985-7993 Species denotes patients Tax:9606
257 8195-8205 Species denotes SARS-CoV-2 Tax:2697049
258 9293-9301 Species denotes patients Tax:9606
259 9401-9411 Species denotes SARS-CoV-2 Tax:2697049
260 9412-9419 Species denotes patient Tax:9606
261 9883-9886 Species denotes men Tax:9606
262 9911-9916 Species denotes women Tax:9606
263 9978-9982 Species denotes mice Tax:10090
264 10011-10017 Species denotes humans Tax:9606
265 10139-10147 Species denotes patients Tax:9606
266 7910-7918 Chemical denotes creatine MESH:D003401
267 9355-9386 Chemical denotes angiotensin receptor 1 blockers
268 9388-9392 Chemical denotes ARBs
269 9660-9667 Chemical denotes luminal MESH:D010634
270 6544-6553 Disease denotes infection MESH:D007239
271 6684-6693 Disease denotes infection MESH:D007239
272 6747-6756 Disease denotes infection MESH:D007239
273 6867-6875 Disease denotes infected MESH:D007239
274 6992-7000 Disease denotes infected MESH:D007239
275 7043-7070 Disease denotes respiratory tract infection MESH:D012141
276 7082-7089 Disease denotes hypoxia MESH:D000860
277 7095-7106 Disease denotes lung damage MESH:D008171
278 7148-7183 Disease denotes acute respiratory distress syndrome MESH:D012128
279 7185-7189 Disease denotes ARDS MESH:D012128
280 7255-7277 Disease denotes cardiovascular disease MESH:D002318
281 7279-7296 Disease denotes diabetes mellitus MESH:D003920
282 7298-7310 Disease denotes hypertension MESH:D006973
283 7320-7332 Disease denotes lung disease MESH:D008171
284 7334-7340 Disease denotes cancer MESH:D009369
285 7342-7364 Disease denotes chronic kidney disease MESH:D051436
286 7370-7377 Disease denotes obesity MESH:D009765
287 7404-7408 Disease denotes ARDS MESH:D012128
288 7434-7439 Disease denotes death MESH:D003643
289 7480-7495 Disease denotes viral infection MESH:D001102
290 7725-7736 Disease denotes lymphopenia MESH:D008231
291 7944-7963 Disease denotes acute kidney injury MESH:D058186
292 7999-8007 Disease denotes COVID-19 MESH:C000657245
293 8066-8081 Disease denotes viral pneumonia
294 8577-8595 Disease denotes SARS-CoV infection MESH:C000657245
295 9233-9245 Disease denotes hypertension MESH:D006973
296 9946-9954 Disease denotes COVID-19 MESH:C000657245
297 10130-10138 Disease denotes COVID-19 MESH:C000657245
325 10468-10469 Gene denotes S Gene:43740568
326 10472-10480 Gene denotes Envelope Gene:43740570
327 10482-10483 Gene denotes E Gene:43740570
328 10486-10494 Gene denotes Membrane Gene:43740571
329 10496-10497 Gene denotes M Gene:43740571
330 10504-10516 Gene denotes Nucleocapsid Gene:43740575
331 10518-10519 Gene denotes N Gene:43740575
332 11128-11132 Gene denotes nsp1 Gene:10045
333 11260-11264 Gene denotes RdRp Gene:43740578
334 11291-11295 Gene denotes nsp3 Gene:10044
335 11324-11328 Gene denotes nsp5 Gene:92521
336 11341-11345 Gene denotes Mpro Gene:8673700
337 11400-11404 Gene denotes RdRp Gene:43740578
338 11628-11632 Gene denotes nsp1 Gene:10045
339 11048-11056 Gene denotes membrane Gene:43740571
340 10553-10558 Gene denotes Spike Gene:43740568
341 10461-10466 Gene denotes Spike Gene:43740568
342 11064-11076 Gene denotes nucleocapsid Gene:43740575
343 10861-10873 Gene denotes nucleocapsid Gene:43740575
344 10975-10983 Gene denotes envelope Gene:43740570
345 11481-11485 Gene denotes RdRp Gene:43740578
346 10780-10781 Gene denotes E Gene:43740570
347 10661-10662 Gene denotes M Gene:43740571
348 10578-10579 Gene denotes N Gene:43740575
349 10311-10321 Species denotes SARS-CoV-2 Tax:2697049
350 11522-11532 Species denotes SARS-CoV-2 Tax:2697049
351 10969-10974 Chemical denotes lipid MESH:D008055
353 11827-11837 Species denotes SARS-CoV-2 Tax:2697049
355 11866-11881 Disease denotes Viral Infection MESH:D001102
367 12224-12229 Gene denotes Spike Gene:43740568
368 12797-12802 Gene denotes Spike Gene:43740568
369 12060-12072 Species denotes participants Tax:9606
370 12155-12165 Species denotes SARS-CoV-2 Tax:2697049
371 12244-12249 Species denotes human Tax:9606
372 12320-12330 Species denotes SARS-CoV-2 Tax:2697049
373 12404-12414 Species denotes SARS-CoV-2 Tax:2697049
374 12572-12580 Species denotes patients Tax:9606
375 12622-12632 Species denotes SARS-CoV-2 Tax:2697049
376 12978-12986 Disease denotes COVID-19 MESH:C000657245
377 13201-13209 Disease denotes COVID-19 MESH:C000657245
425 14129-14133 Gene denotes RdRp Gene:43740578
426 14433-14437 Gene denotes RdRp Gene:43740578
427 14616-14620 Gene denotes ACE2 Gene:59272
428 14626-14633 Gene denotes TMPRSS2 Gene:7113
429 14826-14833 Gene denotes TMPRSS2 Gene:7113
430 14892-14896 Gene denotes ACE2 Gene:59272
431 15067-15070 Gene denotes ACE Gene:1636
432 15184-15189 Gene denotes hACE2 Gene:59272
433 15362-15375 Gene denotes interleukin-6 Gene:3569
434 15377-15381 Gene denotes IL-6 Gene:3569
435 14491-14495 Gene denotes RdRp Gene:43740578
436 14886-14891 Gene denotes Spike Gene:43740568
437 14601-14606 Gene denotes Spike Gene:43740568
438 13448-13458 Species denotes SARS-CoV-2 Tax:2697049
439 13715-13725 Species denotes SARS-CoV-2 Tax:2697049
440 13932-13940 Species denotes patients Tax:9606
441 14241-14247 Species denotes humans Tax:9606
442 14311-14319 Species denotes SARS-CoV Tax:694009
443 14381-14391 Species denotes SARS-CoV-2 Tax:2697049
444 14392-14400 Species denotes patients Tax:9606
445 15445-15455 Species denotes SARS-CoV-2 Tax:2697049
446 16037-16045 Species denotes patients Tax:9606
447 13865-13874 Chemical denotes ritonavir MESH:D019438
448 13875-13884 Chemical denotes liponavir
449 13944-13962 Chemical denotes Hydroxychloroquine MESH:D006886
450 14144-14154 Chemical denotes remdesivir MESH:C000606551
451 14192-14202 Chemical denotes faviprivir
452 14205-14215 Chemical denotes Remdesivir MESH:C000606551
453 14367-14377 Chemical denotes remdesivir MESH:C000606551
454 14480-14489 Chemical denotes ribavirin MESH:D012254
455 14723-14740 Chemical denotes Camostat mesylate MESH:C034532
456 14846-14853 Chemical denotes Arbidol MESH:C086979
457 15006-15014 Chemical denotes thiazide MESH:D049971
458 15016-15024 Chemical denotes thiazide MESH:D049971
459 15041-15048 Chemical denotes calcium MESH:D002118
460 15557-15568 Chemical denotes baricitinib MESH:C000596027
461 15573-15584 Chemical denotes ruxolitinib MESH:C540383
462 15729-15738 Chemical denotes quinolone MESH:D015363
463 15740-15749 Chemical denotes macrolide MESH:D018942
464 15755-15763 Chemical denotes β-lactam MESH:D047090
465 13632-13640 Disease denotes COVID-19 MESH:C000657245
466 13912-13931 Disease denotes SARS-CoV-2 infected MESH:C000657245
467 14259-14272 Disease denotes virus disease MESH:D001102
468 14302-14306 Disease denotes MERS MESH:D018352
469 14777-14800 Disease denotes pancreatic inflammation MESH:D007249
470 15120-15128 Disease denotes COVID-19 MESH:C000657245
471 15784-15792 Disease denotes COVID-19 MESH:C000657245
541 18797-18801 Gene denotes Mpro Gene:8673700
542 19293-19297 Gene denotes Mpro Gene:8673700
543 19514-19518 Gene denotes Mpro Gene:8673700
544 19907-19911 Gene denotes RdRp Gene:43740578
545 19999-20003 Gene denotes RdRp Gene:43740578
546 19690-19694 Gene denotes Mpro Gene:8673700
547 19401-19405 Gene denotes Mpro Gene:8673700
548 18639-18643 Gene denotes Mpro Gene:8673700
549 18620-18624 Gene denotes Mpro Gene:8673700
550 18605-18609 Gene denotes Mpro Gene:8673700
551 18251-18255 Gene denotes Mpro Gene:8673700
552 18099-18103 Gene denotes Mpro Gene:8673700
553 17736-17740 Gene denotes Mpro Gene:8673700
554 17482-17486 Gene denotes Mpro Gene:8673700
555 16791-16795 Gene denotes Mpro Gene:8673700
556 16663-16667 Gene denotes Mpro Gene:8673700
557 16297-16301 Gene denotes Mpro Gene:8673700
558 16534-16547 Species denotes coronaviruses Tax:11118
559 16614-16631 Species denotes novel coronavirus Tax:2697049
560 16685-16696 Species denotes coronavirus Tax:11118
561 17250-17255 Species denotes human Tax:9606
562 17471-17481 Species denotes SARS-CoV-2 Tax:2697049
563 18240-18250 Species denotes SARS-CoV-2 Tax:2697049
564 18594-18604 Species denotes SARS-CoV-2 Tax:2697049
565 18611-18619 Species denotes SARS-CoV Tax:694009
566 18630-18638 Species denotes MERS-CoV Tax:1335626
567 18786-18796 Species denotes SARS-CoV-2 Tax:2697049
568 18869-18874 Species denotes mouse Tax:10090
569 18879-18884 Species denotes human Tax:9606
570 18991-18995 Species denotes mice Tax:10090
571 19377-19387 Species denotes Rhinovirus Tax:12059
572 19392-19400 Species denotes SARS-CoV Tax:694009
573 19896-19906 Species denotes SARS-CoV-2 Tax:2697049
574 19977-19985 Species denotes SARS-CoV Tax:694009
575 17361-17365 Gene denotes Mpro Gene:8673700
576 16807-16810 Chemical denotes Cys MESH:D003545
577 17030-17033 Chemical denotes Cys MESH:D003545
578 17036-17039 Chemical denotes His MESH:D006639
579 17042-17045 Chemical denotes Glu MESH:D018698
580 17046-17049 Chemical denotes Asp MESH:D001224
581 17121-17124 Chemical denotes Gln MESH:D005973
582 17203-17206 Chemical denotes Gly MESH:D005998
583 17208-17211 Chemical denotes Ala MESH:D000409
584 17216-17219 Chemical denotes Ser MESH:D012694
585 17528-17539 Chemical denotes α-ketoamide
586 17681-17693 Chemical denotes α-Ketoamides
587 17753-17761 Chemical denotes hydrogen MESH:D006859
588 17835-17844 Chemical denotes aldehydes MESH:D000447
589 17926-17929 Chemical denotes Cys MESH:D003545
590 17975-17988 Chemical denotes thiohemiketal
591 17996-18008 Chemical denotes α-ketoamides
592 18036-18044 Chemical denotes γ-lactam
593 18075-18084 Chemical denotes glutamine MESH:D005973
594 18282-18285 Chemical denotes 11r
595 18317-18319 Chemical denotes P3
596 18320-18322 Chemical denotes P2 MESH:C020845
597 18323-18328 Chemical denotes amide MESH:D000577
598 18341-18349 Chemical denotes pyridone MESH:D011728
599 18393-18396 Chemical denotes 13a
600 18717-18720 Chemical denotes 13a
601 18754-18757 Chemical denotes 13b
602 18829-18832 Chemical denotes 13a
603 18837-18840 Chemical denotes 13b
604 18897-18900 Chemical denotes 13b
605 18968-18971 Chemical denotes 13a
606 19098-19108 Chemical denotes ketoamides
607 19435-19446 Chemical denotes rupintrivir MESH:C118874
608 19448-19455 Chemical denotes AG-7088 MESH:C118874
609 20107-20117 Chemical denotes remdesivir MESH:C000606551
620 20204-20214 Species denotes SARS-CoV-2 Tax:2697049
621 20265-20278 Species denotes coronaviruses Tax:11118
622 20413-20426 Species denotes coronaviruses Tax:11118
623 20614-20629 Species denotes new coronavirus Tax:2697049
624 20656-20661 Species denotes human Tax:9606
625 20995-21005 Species denotes SARS-CoV-2 Tax:2697049
626 21406-21419 Species denotes coronaviruses Tax:11118
627 21503-21511 Species denotes SARS-CoV Tax:694009
628 20194-20198 Disease denotes MERS MESH:D018352
629 20908-20914 Disease denotes deaths MESH:D003643
635 22036-22040 Gene denotes Mpro Gene:8673700
636 21740-21750 Species denotes SARS-CoV-2 Tax:2697049
637 21952-21962 Species denotes SARS-CoV-2 Tax:2697049
638 22025-22035 Species denotes SARS-CoV-2 Tax:2697049
639 21847-21855 Disease denotes COVID-19 MESH:C000657245

2_test

Id Subject Object Predicate Lexical cue
32388976-32123347-144031 5107-5108 32123347 denotes 7
32388976-32142651-144032 5249-5250 32142651 denotes 8
32388976-32142651-144033 5390-5391 32142651 denotes 8
32388976-18798692-144034 5669-5670 18798692 denotes 9
32388976-20007278-144035 5873-5875 20007278 denotes 10
32388976-32226821-144036 6106-6108 32226821 denotes 11
32388976-9658133-144037 6223-6225 9658133 denotes 12
32388976-32171076-144038 7654-7656 32171076 denotes 15
32388976-32171076-144039 7964-7966 32171076 denotes 15
32388976-32133578-144040 8186-8188 32133578 denotes 16
32388976-32142651-144041 8247-8248 32142651 denotes 8
32388976-16007097-144042 8711-8713 16007097 denotes 17
32388976-32125455-144043 8888-8890 32125455 denotes 18
32388976-32125455-144044 9189-9191 32125455 denotes 18
32388976-32125455-144045 9443-9445 32125455 denotes 18
32388976-32142651-144046 9616-9617 32142651 denotes 8
32388976-32015508-144047 10521-10522 32015508 denotes 1
32388976-32015508-144048 11136-11137 32015508 denotes 1
32388976-32015508-144049 11803-11804 32015508 denotes 1
32388976-32284615-144050 12509-12511 32284615 denotes 20
32388976-32226821-144051 13674-13676 32226821 denotes 11
32388976-32142651-144052 14203-14204 32142651 denotes 8
32388976-32226821-144053 14320-14322 32226821 denotes 11
32388976-22496216-144054 14843-14845 22496216 denotes 22
32388976-32226821-144055 15493-15495 32226821 denotes 11
32388976-25039866-144056 16660-16662 25039866 denotes 25
32388976-25039866-144057 16960-16962 25039866 denotes 25
32388976-32277040-144058 19996-19998 32277040 denotes 28