PMC:7205724 / 11673-12516 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"380","span":{"begin":41,"end":44},"obj":"Gene"},{"id":"381","span":{"begin":235,"end":238},"obj":"Gene"},{"id":"382","span":{"begin":247,"end":250},"obj":"Gene"},{"id":"383","span":{"begin":606,"end":607},"obj":"Gene"},{"id":"384","span":{"begin":531,"end":532},"obj":"Gene"},{"id":"385","span":{"begin":73,"end":86},"obj":"Species"},{"id":"386","span":{"begin":145,"end":153},"obj":"Species"},{"id":"387","span":{"begin":205,"end":226},"obj":"Species"},{"id":"388","span":{"begin":243,"end":246},"obj":"Species"},{"id":"389","span":{"begin":303,"end":310},"obj":"Species"},{"id":"390","span":{"begin":335,"end":344},"obj":"Species"},{"id":"391","span":{"begin":417,"end":434},"obj":"Species"},{"id":"392","span":{"begin":442,"end":463},"obj":"Species"},{"id":"393","span":{"begin":548,"end":557},"obj":"Species"},{"id":"394","span":{"begin":633,"end":637},"obj":"Species"},{"id":"395","span":{"begin":647,"end":656},"obj":"Species"},{"id":"396","span":{"begin":740,"end":749},"obj":"Species"},{"id":"397","span":{"begin":796,"end":804},"obj":"Species"}],"attributes":[{"id":"A380","pred":"tao:has_database_id","subj":"380","obj":"Gene:22924"},{"id":"A381","pred":"tao:has_database_id","subj":"381","obj":"Gene:22924"},{"id":"A382","pred":"tao:has_database_id","subj":"382","obj":"Gene:22924"},{"id":"A383","pred":"tao:has_database_id","subj":"383","obj":"Gene:43740568"},{"id":"A384","pred":"tao:has_database_id","subj":"384","obj":"Gene:43740568"},{"id":"A385","pred":"tao:has_database_id","subj":"385","obj":"Tax:11118"},{"id":"A386","pred":"tao:has_database_id","subj":"386","obj":"Tax:694009"},{"id":"A387","pred":"tao:has_database_id","subj":"387","obj":"Tax:694009"},{"id":"A388","pred":"tao:has_database_id","subj":"388","obj":"Tax:11118"},{"id":"A389","pred":"tao:has_database_id","subj":"389","obj":"Tax:9606"},{"id":"A390","pred":"tao:has_database_id","subj":"390","obj":"Tax:2697049"},{"id":"A391","pred":"tao:has_database_id","subj":"391","obj":"Tax:2697049"},{"id":"A392","pred":"tao:has_database_id","subj":"392","obj":"Tax:694009"},{"id":"A393","pred":"tao:has_database_id","subj":"393","obj":"Tax:2697049"},{"id":"A394","pred":"tao:has_database_id","subj":"394","obj":"Tax:11118"},{"id":"A395","pred":"tao:has_database_id","subj":"395","obj":"Tax:694009"},{"id":"A396","pred":"tao:has_database_id","subj":"396","obj":"Tax:2697049"},{"id":"A397","pred":"tao:has_database_id","subj":"397","obj":"Tax:694009"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T85","span":{"begin":0,"end":6},"obj":"Body_part"},{"id":"T86","span":{"begin":346,"end":349},"obj":"Body_part"},{"id":"T87","span":{"begin":398,"end":409},"obj":"Body_part"},{"id":"T88","span":{"begin":533,"end":540},"obj":"Body_part"},{"id":"T89","span":{"begin":608,"end":615},"obj":"Body_part"}],"attributes":[{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma67095"},{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma82740"},{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T71","span":{"begin":145,"end":153},"obj":"Disease"},{"id":"T72","span":{"begin":205,"end":209},"obj":"Disease"},{"id":"T73","span":{"begin":316,"end":320},"obj":"Disease"},{"id":"T74","span":{"begin":442,"end":446},"obj":"Disease"},{"id":"T75","span":{"begin":623,"end":627},"obj":"Disease"},{"id":"T76","span":{"begin":796,"end":804},"obj":"Disease"}],"attributes":[{"id":"A71","pred":"mondo_id","subj":"T71","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A72","pred":"mondo_id","subj":"T72","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A73","pred":"mondo_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A74","pred":"mondo_id","subj":"T74","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A75","pred":"mondo_id","subj":"T75","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A76","pred":"mondo_id","subj":"T76","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T128","span":{"begin":21,"end":22},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T129","span":{"begin":29,"end":32},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T130","span":{"begin":301,"end":302},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T131","span":{"begin":495,"end":499},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T132","span":{"begin":558,"end":561},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T133","span":{"begin":562,"end":563},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T134","span":{"begin":619,"end":622},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T135","span":{"begin":838,"end":842},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T122","span":{"begin":240,"end":242},"obj":"Chemical"},{"id":"T123","span":{"begin":398,"end":409},"obj":"Chemical"},{"id":"T124","span":{"begin":533,"end":540},"obj":"Chemical"},{"id":"T125","span":{"begin":608,"end":615},"obj":"Chemical"}],"attributes":[{"id":"A122","pred":"chebi_id","subj":"T122","obj":"http://purl.obolibrary.org/obo/CHEBI_74815"},{"id":"A123","pred":"chebi_id","subj":"T123","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"id":"A124","pred":"chebi_id","subj":"T124","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A125","pred":"chebi_id","subj":"T125","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-MedDRA","denotations":[{"id":"T8","span":{"begin":262,"end":284},"obj":"http://purl.bioontology.org/ontology/MEDDRA/10022891"}],"attributes":[{"id":"A8","pred":"meddra_id","subj":"T8","obj":"http://purl.bioontology.org/ontology/MEDDRA/10049413"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T83","span":{"begin":346,"end":349},"obj":"Chemical"},{"id":"T84","span":{"begin":398,"end":409},"obj":"Chemical"},{"id":"T85","span":{"begin":533,"end":540},"obj":"Chemical"},{"id":"T86","span":{"begin":608,"end":615},"obj":"Chemical"}],"attributes":[{"id":"A85","pred":"chebi_id","subj":"T85","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A84","pred":"chebi_id","subj":"T84","obj":"http://purl.obolibrary.org/obo/CHEBI_36976"},{"id":"A83","pred":"chebi_id","subj":"T83","obj":"http://purl.obolibrary.org/obo/CHEBI_33697"},{"id":"A86","pred":"chebi_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T88","span":{"begin":29,"end":32},"obj":"Species"},{"id":"T89","span":{"begin":145,"end":153},"obj":"Species"},{"id":"T90","span":{"begin":205,"end":226},"obj":"Species"},{"id":"T91","span":{"begin":316,"end":320},"obj":"Species"},{"id":"T92","span":{"begin":335,"end":344},"obj":"Species"},{"id":"T93","span":{"begin":442,"end":463},"obj":"Species"},{"id":"T94","span":{"begin":495,"end":499},"obj":"Species"},{"id":"T95","span":{"begin":548,"end":557},"obj":"Species"},{"id":"T96","span":{"begin":619,"end":637},"obj":"Species"},{"id":"T97","span":{"begin":647,"end":656},"obj":"Species"},{"id":"T98","span":{"begin":740,"end":749},"obj":"Species"},{"id":"T99","span":{"begin":796,"end":804},"obj":"Species"},{"id":"T100","span":{"begin":838,"end":842},"obj":"Species"}],"attributes":[{"id":"A93","pred":"ncbi_taxonomy_id","subj":"T93","obj":"NCBItxid:694009"},{"id":"A88","pred":"ncbi_taxonomy_id","subj":"T88","obj":"NCBItxid:9397"},{"id":"A92","pred":"ncbi_taxonomy_id","subj":"T92","obj":"NCBItxid:2697049"},{"id":"A94","pred":"ncbi_taxonomy_id","subj":"T94","obj":"NCBItxid:9397"},{"id":"A95","pred":"ncbi_taxonomy_id","subj":"T95","obj":"NCBItxid:2697049"},{"id":"A98","pred":"ncbi_taxonomy_id","subj":"T98","obj":"NCBItxid:2697049"},{"id":"A90","pred":"ncbi_taxonomy_id","subj":"T90","obj":"NCBItxid:694009"},{"id":"A91","pred":"ncbi_taxonomy_id","subj":"T91","obj":"NCBItxid:694009"},{"id":"A100","pred":"ncbi_taxonomy_id","subj":"T100","obj":"NCBItxid:9397"},{"id":"A97","pred":"ncbi_taxonomy_id","subj":"T97","obj":"NCBItxid:694009"},{"id":"A96","pred":"ncbi_taxonomy_id","subj":"T96","obj":"NCBItxid:1508227"},{"id":"A99","pred":"ncbi_taxonomy_id","subj":"T99","obj":"NCBItxid:694009"},{"id":"A89","pred":"ncbi_taxonomy_id","subj":"T89","obj":"NCBItxid:694009"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-sentences","denotations":[{"id":"T98","span":{"begin":0,"end":176},"obj":"Sentence"},{"id":"T99","span":{"begin":177,"end":257},"obj":"Sentence"},{"id":"T100","span":{"begin":258,"end":345},"obj":"Sentence"},{"id":"T101","span":{"begin":346,"end":511},"obj":"Sentence"},{"id":"T102","span":{"begin":512,"end":689},"obj":"Sentence"},{"id":"T103","span":{"begin":690,"end":843},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"380","span":{"begin":41,"end":44},"obj":"Gene"},{"id":"385","span":{"begin":73,"end":86},"obj":"Species"},{"id":"386","span":{"begin":145,"end":153},"obj":"Species"},{"id":"387","span":{"begin":205,"end":226},"obj":"Species"},{"id":"381","span":{"begin":235,"end":238},"obj":"Gene"},{"id":"388","span":{"begin":243,"end":246},"obj":"Species"},{"id":"382","span":{"begin":247,"end":250},"obj":"Gene"},{"id":"389","span":{"begin":303,"end":310},"obj":"Species"},{"id":"390","span":{"begin":335,"end":344},"obj":"Species"},{"id":"391","span":{"begin":417,"end":434},"obj":"Species"},{"id":"392","span":{"begin":442,"end":463},"obj":"Species"},{"id":"384","span":{"begin":531,"end":532},"obj":"Gene"},{"id":"393","span":{"begin":548,"end":557},"obj":"Species"},{"id":"383","span":{"begin":606,"end":607},"obj":"Gene"},{"id":"394","span":{"begin":633,"end":637},"obj":"Species"},{"id":"395","span":{"begin":647,"end":656},"obj":"Species"},{"id":"396","span":{"begin":740,"end":749},"obj":"Species"},{"id":"397","span":{"begin":796,"end":804},"obj":"Species"}],"attributes":[{"id":"A381","pred":"pubann:denotes","subj":"381","obj":"Gene:22924"},{"id":"A394","pred":"pubann:denotes","subj":"394","obj":"Tax:11118"},{"id":"A395","pred":"pubann:denotes","subj":"395","obj":"Tax:694009"},{"id":"A385","pred":"pubann:denotes","subj":"385","obj":"Tax:11118"},{"id":"A383","pred":"pubann:denotes","subj":"383","obj":"Gene:43740568"},{"id":"A386","pred":"pubann:denotes","subj":"386","obj":"Tax:694009"},{"id":"A388","pred":"pubann:denotes","subj":"388","obj":"Tax:11118"},{"id":"A397","pred":"pubann:denotes","subj":"397","obj":"Tax:694009"},{"id":"A391","pred":"pubann:denotes","subj":"391","obj":"Tax:2697049"},{"id":"A384","pred":"pubann:denotes","subj":"384","obj":"Gene:43740568"},{"id":"A396","pred":"pubann:denotes","subj":"396","obj":"Tax:2697049"},{"id":"A380","pred":"pubann:denotes","subj":"380","obj":"Gene:22924"},{"id":"A387","pred":"pubann:denotes","subj":"387","obj":"Tax:694009"},{"id":"A393","pred":"pubann:denotes","subj":"393","obj":"Tax:2697049"},{"id":"A389","pred":"pubann:denotes","subj":"389","obj":"Tax:9606"},{"id":"A390","pred":"pubann:denotes","subj":"390","obj":"Tax:2697049"},{"id":"A382","pred":"pubann:denotes","subj":"382","obj":"Gene:22924"},{"id":"A392","pred":"pubann:denotes","subj":"392","obj":"Tax:694009"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T1233","span":{"begin":531,"end":540},"obj":"Protein"},{"id":"T1266","span":{"begin":606,"end":615},"obj":"Protein"}],"attributes":[{"id":"A1233","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9UIP0"},{"id":"A1234","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9UIN9"},{"id":"A1235","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9UIN8"},{"id":"A1236","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9UIN7"},{"id":"A1237","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9UIN6"},{"id":"A1238","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9UBH8"},{"id":"A1239","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NRH8"},{"id":"A1240","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NRH7"},{"id":"A1241","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NRH6"},{"id":"A1242","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NRH5"},{"id":"A1243","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NRH4"},{"id":"A1244","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NPG5"},{"id":"A1245","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NPE0"},{"id":"A1246","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q9NP52"},{"id":"A1247","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q95IF9"},{"id":"A1248","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q8N5P3"},{"id":"A1249","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q8IZU6"},{"id":"A1250","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q8IZU5"},{"id":"A1251","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q8IZU4"},{"id":"A1252","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q86Z04"},{"id":"A1253","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q7YR44"},{"id":"A1254","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q7LA71"},{"id":"A1255","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q7LA70"},{"id":"A1256","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q5STD2"},{"id":"A1257","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q5SQ85"},{"id":"A1258","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q1XI16"},{"id":"A1259","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q1XI12"},{"id":"A1260","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/Q15517"},{"id":"A1261","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/O43509"},{"id":"A1262","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/O19084"},{"id":"A1263","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/B0UYZ7"},{"id":"A1264","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/B0S7V2"},{"id":"A1265","pred":"uniprot_id","subj":"T1233","obj":"https://www.uniprot.org/uniprot/A5A6L9"},{"id":"A1266","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9UIP0"},{"id":"A1267","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9UIN9"},{"id":"A1268","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9UIN8"},{"id":"A1269","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9UIN7"},{"id":"A1270","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9UIN6"},{"id":"A1271","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9UBH8"},{"id":"A1272","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NRH8"},{"id":"A1273","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NRH7"},{"id":"A1274","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NRH6"},{"id":"A1275","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NRH5"},{"id":"A1276","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NRH4"},{"id":"A1277","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NPG5"},{"id":"A1278","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NPE0"},{"id":"A1279","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q9NP52"},{"id":"A1280","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q95IF9"},{"id":"A1281","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q8N5P3"},{"id":"A1282","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q8IZU6"},{"id":"A1283","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q8IZU5"},{"id":"A1284","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q8IZU4"},{"id":"A1285","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q86Z04"},{"id":"A1286","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q7YR44"},{"id":"A1287","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q7LA71"},{"id":"A1288","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q7LA70"},{"id":"A1289","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q5STD2"},{"id":"A1290","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q5SQ85"},{"id":"A1291","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q1XI16"},{"id":"A1292","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q1XI12"},{"id":"A1293","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/Q15517"},{"id":"A1294","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/O43509"},{"id":"A1295","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/O19084"},{"id":"A1296","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/B0UYZ7"},{"id":"A1297","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/B0S7V2"},{"id":"A1298","pred":"uniprot_id","subj":"T1266","obj":"https://www.uniprot.org/uniprot/A5A6L9"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-Enju","denotations":[{"id":"T28843","span":{"begin":0,"end":6},"obj":"NN"},{"id":"T46450","span":{"begin":7,"end":17},"obj":"NN"},{"id":"T27748","span":{"begin":18,"end":20},"obj":"IN"},{"id":"T27295","span":{"begin":21,"end":22},"obj":"DT"},{"id":"T62671","span":{"begin":23,"end":28},"obj":"JJ"},{"id":"T93555","span":{"begin":29,"end":32},"obj":"NN"},{"id":"T52375","span":{"begin":33,"end":39},"obj":"NN"},{"id":"T30106","span":{"begin":39,"end":40},"obj":"-COMMA-"},{"id":"T79240","span":{"begin":41,"end":44},"obj":"NN"},{"id":"T51658","span":{"begin":44,"end":45},"obj":"-COMMA-"},{"id":"T48337","span":{"begin":46,"end":51},"obj":"MD"},{"id":"T23533","span":{"begin":52,"end":58},"obj":"VB"},{"id":"T45372","span":{"begin":59,"end":61},"obj":"DT"},{"id":"T48569","span":{"begin":62,"end":69},"obj":"NN"},{"id":"T20680","span":{"begin":70,"end":72},"obj":"IN"},{"id":"T19302","span":{"begin":73,"end":86},"obj":"NNS"},{"id":"T18234","span":{"begin":86,"end":87},"obj":"-COMMA-"},{"id":"T77212","span":{"begin":88,"end":93},"obj":"WDT"},{"id":"T37427","span":{"begin":94,"end":97},"obj":"VBD"},{"id":"T90838","span":{"begin":98,"end":104},"obj":"RB"},{"id":"T69281","span":{"begin":105,"end":114},"obj":"JJ"},{"id":"T30703","span":{"begin":115,"end":117},"obj":"TO"},{"id":"T45933","span":{"begin":118,"end":121},"obj":"DT"},{"id":"T53102","span":{"begin":122,"end":131},"obj":"JJ"},{"id":"T21161","span":{"begin":132,"end":137},"obj":"NN"},{"id":"T31651","span":{"begin":138,"end":140},"obj":"IN"},{"id":"T24092","span":{"begin":141,"end":144},"obj":"DT"},{"id":"T76932","span":{"begin":145,"end":153},"obj":"JJ"},{"id":"T42133","span":{"begin":154,"end":162},"obj":"NN"},{"id":"T26029","span":{"begin":163,"end":165},"obj":"IN"},{"id":"T7676","span":{"begin":166,"end":175},"obj":"CD"},{"id":"T55417","span":{"begin":177,"end":182},"obj":"RB"},{"id":"T40490","span":{"begin":182,"end":183},"obj":"-COMMA-"},{"id":"T99577","span":{"begin":184,"end":186},"obj":"PRP"},{"id":"T85900","span":{"begin":187,"end":195},"obj":"VBD"},{"id":"T84303","span":{"begin":196,"end":199},"obj":"DT"},{"id":"T99794","span":{"begin":200,"end":204},"obj":"NN"},{"id":"T28667","span":{"begin":205,"end":214},"obj":"JJ"},{"id":"T13194","span":{"begin":215,"end":226},"obj":"NN"},{"id":"T40481","span":{"begin":227,"end":234},"obj":"NN"},{"id":"T51053","span":{"begin":235,"end":238},"obj":"NN"},{"id":"T84085","span":{"begin":239,"end":240},"obj":"-LRB-"},{"id":"T37600","span":{"begin":240,"end":246},"obj":"NN"},{"id":"T96263","span":{"begin":247,"end":250},"obj":"NN"},{"id":"T15140","span":{"begin":250,"end":251},"obj":"-RRB-"},{"id":"T87895","span":{"begin":252,"end":253},"obj":"-LRB-"},{"id":"T40198","span":{"begin":253,"end":255},"obj":"CD"},{"id":"T79787","span":{"begin":255,"end":256},"obj":"-RRB-"},{"id":"T87849","span":{"begin":258,"end":261},"obj":"DT"},{"id":"T82417","span":{"begin":262,"end":277},"obj":"JJ"},{"id":"T31054","span":{"begin":278,"end":284},"obj":"NN"},{"id":"T37752","span":{"begin":285,"end":290},"obj":"NN"},{"id":"T74238","span":{"begin":291,"end":292},"obj":"-LRB-"},{"id":"T3228","span":{"begin":292,"end":296},"obj":"NN"},{"id":"T70930","span":{"begin":296,"end":297},"obj":"-RRB-"},{"id":"T9092","span":{"begin":298,"end":300},"obj":"IN"},{"id":"T49696","span":{"begin":301,"end":302},"obj":"DT"},{"id":"T42278","span":{"begin":303,"end":310},"obj":"NN"},{"id":"T77065","span":{"begin":311,"end":315},"obj":"IN"},{"id":"T56445","span":{"begin":316,"end":320},"obj":"NNS"},{"id":"T91231","span":{"begin":321,"end":330},"obj":"VBD"},{"id":"T55260","span":{"begin":331,"end":334},"obj":"DT"},{"id":"T14876","span":{"begin":335,"end":344},"obj":"NN"},{"id":"T41253","span":{"begin":346,"end":349},"obj":"NN"},{"id":"T76927","span":{"begin":350,"end":360},"obj":"NN"},{"id":"T21523","span":{"begin":361,"end":366},"obj":"MD"},{"id":"T61033","span":{"begin":367,"end":373},"obj":"VB"},{"id":"T57735","span":{"begin":374,"end":379},"obj":"RB"},{"id":"T17027","span":{"begin":380,"end":382},"obj":"CD"},{"id":"T88762","span":{"begin":382,"end":383},"obj":"NN"},{"id":"T56862","span":{"begin":384,"end":394},"obj":"NN"},{"id":"T58084","span":{"begin":395,"end":397},"obj":"IN"},{"id":"T42893","span":{"begin":398,"end":409},"obj":"NNS"},{"id":"T28737","span":{"begin":410,"end":412},"obj":"IN"},{"id":"T98581","span":{"begin":413,"end":416},"obj":"DT"},{"id":"T54378","span":{"begin":417,"end":422},"obj":"JJ"},{"id":"T41408","span":{"begin":423,"end":434},"obj":"NN"},{"id":"T8820","span":{"begin":435,"end":438},"obj":"CC"},{"id":"T82233","span":{"begin":439,"end":441},"obj":"IN"},{"id":"T87395","span":{"begin":442,"end":451},"obj":"JJ"},{"id":"T25315","span":{"begin":452,"end":463},"obj":"NN"},{"id":"T40001","span":{"begin":464,"end":468},"obj":"WDT"},{"id":"T50563","span":{"begin":469,"end":472},"obj":"VBD"},{"id":"T73327","span":{"begin":473,"end":483},"obj":"RB"},{"id":"T43308","span":{"begin":484,"end":491},"obj":"VBN"},{"id":"T87528","span":{"begin":492,"end":494},"obj":"TO"},{"id":"T18784","span":{"begin":495,"end":499},"obj":"NNS"},{"id":"T21998","span":{"begin":500,"end":501},"obj":"-LRB-"},{"id":"T45109","span":{"begin":501,"end":503},"obj":"CD"},{"id":"T62980","span":{"begin":503,"end":504},"obj":"-RRB-"},{"id":"T34259","span":{"begin":504,"end":505},"obj":"-COMMA-"},{"id":"T56176","span":{"begin":506,"end":507},"obj":"-LRB-"},{"id":"T43975","span":{"begin":507,"end":509},"obj":"CD"},{"id":"T89437","span":{"begin":509,"end":510},"obj":"-RRB-"},{"id":"T32040","span":{"begin":512,"end":514},"obj":"IN"},{"id":"T92103","span":{"begin":515,"end":525},"obj":"JJ"},{"id":"T46259","span":{"begin":525,"end":526},"obj":"-COMMA-"},{"id":"T37699","span":{"begin":527,"end":530},"obj":"DT"},{"id":"T72545","span":{"begin":531,"end":532},"obj":"NN"},{"id":"T24131","span":{"begin":533,"end":540},"obj":"NN"},{"id":"T44437","span":{"begin":541,"end":543},"obj":"IN"},{"id":"T20264","span":{"begin":544,"end":547},"obj":"DT"},{"id":"T45006","span":{"begin":548,"end":557},"obj":"NN"},{"id":"T85613","span":{"begin":558,"end":561},"obj":"VBZ"},{"id":"T77820","span":{"begin":562,"end":563},"obj":"DT"},{"id":"T51362","span":{"begin":564,"end":568},"obj":"JJ"},{"id":"T86629","span":{"begin":569,"end":577},"obj":"NN"},{"id":"T85333","span":{"begin":578,"end":586},"obj":"NN"},{"id":"T4126","span":{"begin":587,"end":589},"obj":"IN"},{"id":"T23106","span":{"begin":590,"end":595},"obj":"CD"},{"id":"T47986","span":{"begin":595,"end":596},"obj":"NN"},{"id":"T62529","span":{"begin":597,"end":601},"obj":"IN"},{"id":"T47180","span":{"begin":602,"end":605},"obj":"DT"},{"id":"T64906","span":{"begin":606,"end":607},"obj":"NN"},{"id":"T55893","span":{"begin":608,"end":615},"obj":"NN"},{"id":"T84276","span":{"begin":616,"end":618},"obj":"IN"},{"id":"T27337","span":{"begin":619,"end":622},"obj":"NN"},{"id":"T65227","span":{"begin":623,"end":632},"obj":"JJ"},{"id":"T48841","span":{"begin":633,"end":637},"obj":"NNS"},{"id":"T43941","span":{"begin":637,"end":638},"obj":"-COMMA-"},{"id":"T76487","span":{"begin":639,"end":643},"obj":"JJ"},{"id":"T69082","span":{"begin":644,"end":646},"obj":"IN"},{"id":"T24341","span":{"begin":647,"end":656},"obj":"JJ"},{"id":"T77949","span":{"begin":657,"end":662},"obj":"NN"},{"id":"T33016","span":{"begin":663,"end":664},"obj":"NNP"},{"id":"T45981","span":{"begin":664,"end":665},"obj":"-COMMA-"},{"id":"T58714","span":{"begin":666,"end":670},"obj":"NNP"},{"id":"T47242","span":{"begin":671,"end":672},"obj":"NNP"},{"id":"T24128","span":{"begin":672,"end":673},"obj":"-COMMA-"},{"id":"T33217","span":{"begin":674,"end":677},"obj":"CC"},{"id":"T49688","span":{"begin":678,"end":684},"obj":"NN"},{"id":"T48117","span":{"begin":685,"end":686},"obj":"-LRB-"},{"id":"T8349","span":{"begin":686,"end":687},"obj":"CD"},{"id":"T82587","span":{"begin":687,"end":688},"obj":"-RRB-"},{"id":"T26826","span":{"begin":690,"end":698},"obj":"RB"},{"id":"T40424","span":{"begin":698,"end":699},"obj":"-COMMA-"},{"id":"T82603","span":{"begin":700,"end":702},"obj":"IN"},{"id":"T83961","span":{"begin":703,"end":715},"obj":"JJ"},{"id":"T26439","span":{"begin":716,"end":721},"obj":"NNS"},{"id":"T36143","span":{"begin":721,"end":722},"obj":"-COMMA-"},{"id":"T1931","span":{"begin":723,"end":731},"obj":"NNS"},{"id":"T94548","span":{"begin":732,"end":735},"obj":"IN"},{"id":"T9564","span":{"begin":736,"end":739},"obj":"DT"},{"id":"T82190","span":{"begin":740,"end":749},"obj":"NN"},{"id":"T51998","span":{"begin":750,"end":753},"obj":"VBP"},{"id":"T48884","span":{"begin":754,"end":756},"obj":"IN"},{"id":"T84416","span":{"begin":757,"end":764},"obj":"JJR"},{"id":"T46091","span":{"begin":765,"end":771},"obj":"NN"},{"id":"T44026","span":{"begin":772,"end":776},"obj":"IN"},{"id":"T19745","span":{"begin":777,"end":782},"obj":"DT"},{"id":"T66697","span":{"begin":783,"end":786},"obj":"IN"},{"id":"T66659","span":{"begin":787,"end":790},"obj":"DT"},{"id":"T22981","span":{"begin":791,"end":795},"obj":"CD"},{"id":"T47496","span":{"begin":796,"end":804},"obj":"NN"},{"id":"T18117","span":{"begin":804,"end":805},"obj":"-COMMA-"},{"id":"T90160","span":{"begin":806,"end":809},"obj":"CC"},{"id":"T86256","span":{"begin":810,"end":819},"obj":"RB"},{"id":"T89702","span":{"begin":820,"end":824},"obj":"RBR"},{"id":"T19375","span":{"begin":825,"end":834},"obj":"JJ"},{"id":"T58982","span":{"begin":835,"end":837},"obj":"TO"},{"id":"T17546","span":{"begin":838,"end":842},"obj":"NNS"}],"relations":[{"id":"R93896","pred":"arg1Of","subj":"T37752","obj":"T9092"},{"id":"R25292","pred":"arg2Of","subj":"T42278","obj":"T9092"},{"id":"R26327","pred":"arg1Of","subj":"T42278","obj":"T49696"},{"id":"R92357","pred":"arg1Of","subj":"T42278","obj":"T77065"},{"id":"R79425","pred":"arg2Of","subj":"T56445","obj":"T77065"},{"id":"R79797","pred":"arg1Of","subj":"T37752","obj":"T91231"},{"id":"R33601","pred":"arg2Of","subj":"T14876","obj":"T91231"},{"id":"R47706","pred":"arg1Of","subj":"T14876","obj":"T55260"},{"id":"R82198","pred":"arg1Of","subj":"T76927","obj":"T41253"},{"id":"R9633","pred":"arg2Of","subj":"T55893","obj":"T62529"},{"id":"R8236","pred":"arg1Of","subj":"T55893","obj":"T47180"},{"id":"R37164","pred":"arg1Of","subj":"T55893","obj":"T64906"},{"id":"R27603","pred":"arg1Of","subj":"T55893","obj":"T84276"},{"id":"R84379","pred":"arg2Of","subj":"T48841","obj":"T84276"},{"id":"R59931","pred":"arg1Of","subj":"T48841","obj":"T27337"},{"id":"R85967","pred":"arg1Of","subj":"T48841","obj":"T65227"},{"id":"R99461","pred":"arg1Of","subj":"T48841","obj":"T43941"},{"id":"R20816","pred":"arg1Of","subj":"T69082","obj":"T76487"},{"id":"R77868","pred":"arg1Of","subj":"T48841","obj":"T69082"},{"id":"R14066","pred":"arg1Of","subj":"T46450","obj":"T28843"},{"id":"R80891","pred":"arg1Of","subj":"T46450","obj":"T27748"},{"id":"R29083","pred":"arg2Of","subj":"T52375","obj":"T27748"},{"id":"R55505","pred":"arg1Of","subj":"T52375","obj":"T27295"},{"id":"R70294","pred":"arg1Of","subj":"T52375","obj":"T62671"},{"id":"R95907","pred":"arg1Of","subj":"T52375","obj":"T93555"},{"id":"R77496","pred":"arg1Of","subj":"T52375","obj":"T30106"},{"id":"R70744","pred":"arg2Of","subj":"T79240","obj":"T30106"},{"id":"R84750","pred":"arg1Of","subj":"T23533","obj":"T51658"},{"id":"R22256","pred":"arg1Of","subj":"T46450","obj":"T48337"},{"id":"R84362","pred":"arg2Of","subj":"T23533","obj":"T48337"},{"id":"R13690","pred":"arg1Of","subj":"T46450","obj":"T23533"},{"id":"R81506","pred":"arg2Of","subj":"T48569","obj":"T23533"},{"id":"R60741","pred":"arg1Of","subj":"T48569","obj":"T45372"},{"id":"R29203","pred":"arg1Of","subj":"T48569","obj":"T20680"},{"id":"R55007","pred":"arg2Of","subj":"T19302","obj":"T20680"},{"id":"R77595","pred":"arg1Of","subj":"T48569","obj":"T18234"},{"id":"R74345","pred":"arg1Of","subj":"T48569","obj":"T77212"},{"id":"R82277","pred":"arg1Of","subj":"T48569","obj":"T37427"},{"id":"R49235","pred":"arg2Of","subj":"T69281","obj":"T37427"},{"id":"R15724","pred":"arg1Of","subj":"T69281","obj":"T90838"},{"id":"R26850","pred":"arg1Of","subj":"T48569","obj":"T69281"},{"id":"R99770","pred":"arg1Of","subj":"T69281","obj":"T30703"},{"id":"R99853","pred":"arg2Of","subj":"T21161","obj":"T30703"},{"id":"R34313","pred":"arg1Of","subj":"T21161","obj":"T45933"},{"id":"R90071","pred":"arg1Of","subj":"T21161","obj":"T53102"},{"id":"R83498","pred":"arg1Of","subj":"T21161","obj":"T31651"},{"id":"R46891","pred":"arg2Of","subj":"T42133","obj":"T31651"},{"id":"R27084","pred":"arg1Of","subj":"T42133","obj":"T24092"},{"id":"R95994","pred":"arg1Of","subj":"T42133","obj":"T76932"},{"id":"R47434","pred":"arg1Of","subj":"T42133","obj":"T26029"},{"id":"R97280","pred":"arg2Of","subj":"T7676","obj":"T26029"},{"id":"R11853","pred":"arg1Of","subj":"T85900","obj":"T55417"},{"id":"R54546","pred":"arg1Of","subj":"T85900","obj":"T40490"},{"id":"R36475","pred":"arg1Of","subj":"T99577","obj":"T85900"},{"id":"R69085","pred":"arg2Of","subj":"T51053","obj":"T85900"},{"id":"R2126","pred":"arg1Of","subj":"T51053","obj":"T84303"},{"id":"R94363","pred":"arg1Of","subj":"T51053","obj":"T99794"},{"id":"R84505","pred":"arg1Of","subj":"T51053","obj":"T28667"},{"id":"R51413","pred":"arg1Of","subj":"T51053","obj":"T13194"},{"id":"R38349","pred":"arg1Of","subj":"T51053","obj":"T40481"},{"id":"R28069","pred":"arg1Of","subj":"T51053","obj":"T84085"},{"id":"R49507","pred":"arg2Of","subj":"T96263","obj":"T84085"},{"id":"R98383","pred":"arg3Of","subj":"T15140","obj":"T84085"},{"id":"R43398","pred":"arg1Of","subj":"T96263","obj":"T37600"},{"id":"R58949","pred":"arg1Of","subj":"T85900","obj":"T87895"},{"id":"R31914","pred":"arg2Of","subj":"T40198","obj":"T87895"},{"id":"R93865","pred":"arg3Of","subj":"T79787","obj":"T87895"},{"id":"R4610","pred":"arg1Of","subj":"T37752","obj":"T87849"},{"id":"R17928","pred":"arg1Of","subj":"T37752","obj":"T82417"},{"id":"R63818","pred":"arg1Of","subj":"T37752","obj":"T31054"},{"id":"R54661","pred":"arg1Of","subj":"T37752","obj":"T74238"},{"id":"R50117","pred":"arg2Of","subj":"T3228","obj":"T74238"},{"id":"R11221","pred":"arg3Of","subj":"T70930","obj":"T74238"},{"id":"R27740","pred":"arg1Of","subj":"T76927","obj":"T21523"},{"id":"R2092","pred":"arg2Of","subj":"T61033","obj":"T21523"},{"id":"R5221","pred":"arg1Of","subj":"T76927","obj":"T61033"},{"id":"R54859","pred":"arg2Of","subj":"T56862","obj":"T61033"},{"id":"R81820","pred":"arg1Of","subj":"T17027","obj":"T57735"},{"id":"R26135","pred":"arg1Of","subj":"T56862","obj":"T17027"},{"id":"R37944","pred":"arg1Of","subj":"T17027","obj":"T88762"},{"id":"R19722","pred":"arg1Of","subj":"T56862","obj":"T58084"},{"id":"R26450","pred":"arg2Of","subj":"T42893","obj":"T58084"},{"id":"R85800","pred":"arg1Of","subj":"T42893","obj":"T28737"},{"id":"R6863","pred":"arg2Of","subj":"T41408","obj":"T28737"},{"id":"R72528","pred":"arg1Of","subj":"T41408","obj":"T98581"},{"id":"R98967","pred":"arg1Of","subj":"T41408","obj":"T54378"},{"id":"R17590","pred":"arg1Of","subj":"T58084","obj":"T8820"},{"id":"R49869","pred":"arg2Of","subj":"T82233","obj":"T8820"},{"id":"R76106","pred":"arg1Of","subj":"T56862","obj":"T82233"},{"id":"R40705","pred":"arg2Of","subj":"T25315","obj":"T82233"},{"id":"R21771","pred":"arg1Of","subj":"T25315","obj":"T87395"},{"id":"R89495","pred":"arg1Of","subj":"T25315","obj":"T40001"},{"id":"R12805","pred":"arg1Of","subj":"T25315","obj":"T50563"},{"id":"R43366","pred":"arg2Of","subj":"T43308","obj":"T50563"},{"id":"R19626","pred":"arg1Of","subj":"T43308","obj":"T73327"},{"id":"R71640","pred":"arg1Of","subj":"T25315","obj":"T43308"},{"id":"R98847","pred":"arg1Of","subj":"T43308","obj":"T87528"},{"id":"R56090","pred":"arg2Of","subj":"T18784","obj":"T87528"},{"id":"R53709","pred":"arg1Of","subj":"T18784","obj":"T21998"},{"id":"R55235","pred":"arg2Of","subj":"T45109","obj":"T21998"},{"id":"R4872","pred":"arg3Of","subj":"T62980","obj":"T21998"},{"id":"R85928","pred":"arg1Of","subj":"T43308","obj":"T34259"},{"id":"R66763","pred":"arg1Of","subj":"T43308","obj":"T56176"},{"id":"R82331","pred":"arg2Of","subj":"T43975","obj":"T56176"},{"id":"R65672","pred":"arg3Of","subj":"T89437","obj":"T56176"},{"id":"R60898","pred":"arg1Of","subj":"T85613","obj":"T32040"},{"id":"R8931","pred":"arg2Of","subj":"T92103","obj":"T32040"},{"id":"R37482","pred":"arg1Of","subj":"T85613","obj":"T46259"},{"id":"R69236","pred":"arg1Of","subj":"T24131","obj":"T37699"},{"id":"R90434","pred":"arg1Of","subj":"T24131","obj":"T72545"},{"id":"R42614","pred":"arg1Of","subj":"T24131","obj":"T44437"},{"id":"R23596","pred":"arg2Of","subj":"T45006","obj":"T44437"},{"id":"R11370","pred":"arg1Of","subj":"T45006","obj":"T20264"},{"id":"R80817","pred":"arg1Of","subj":"T24131","obj":"T85613"},{"id":"R49961","pred":"arg2Of","subj":"T85333","obj":"T85613"},{"id":"R54652","pred":"arg1Of","subj":"T85333","obj":"T77820"},{"id":"R29265","pred":"arg1Of","subj":"T85333","obj":"T51362"},{"id":"R4874","pred":"arg1Of","subj":"T85333","obj":"T86629"},{"id":"R2751","pred":"arg1Of","subj":"T85333","obj":"T4126"},{"id":"R99494","pred":"arg2Of","subj":"T47986","obj":"T4126"},{"id":"R81734","pred":"arg1Of","subj":"T47986","obj":"T23106"},{"id":"R65938","pred":"arg1Of","subj":"T85613","obj":"T62529"},{"id":"R59047","pred":"arg2Of","subj":"T33217","obj":"T69082"},{"id":"R62932","pred":"arg1Of","subj":"T33016","obj":"T24341"},{"id":"R11481","pred":"arg1Of","subj":"T33016","obj":"T77949"},{"id":"R38926","pred":"arg1Of","subj":"T33016","obj":"T45981"},{"id":"R47300","pred":"arg2Of","subj":"T47242","obj":"T45981"},{"id":"R77326","pred":"arg1Of","subj":"T47242","obj":"T58714"},{"id":"R75080","pred":"arg1Of","subj":"T33217","obj":"T24128"},{"id":"R91783","pred":"arg1Of","subj":"T45981","obj":"T33217"},{"id":"R80254","pred":"arg2Of","subj":"T49688","obj":"T33217"},{"id":"R54614","pred":"arg1Of","subj":"T49688","obj":"T48117"},{"id":"R65396","pred":"arg2Of","subj":"T8349","obj":"T48117"},{"id":"R80187","pred":"arg3Of","subj":"T82587","obj":"T48117"},{"id":"R79793","pred":"arg1Of","subj":"T51998","obj":"T26826"},{"id":"R43834","pred":"arg1Of","subj":"T51998","obj":"T40424"},{"id":"R27649","pred":"arg1Of","subj":"T51998","obj":"T82603"},{"id":"R96220","pred":"arg2Of","subj":"T26439","obj":"T82603"},{"id":"R84762","pred":"arg1Of","subj":"T26439","obj":"T83961"},{"id":"R83564","pred":"arg1Of","subj":"T51998","obj":"T36143"},{"id":"R35953","pred":"arg1Of","subj":"T1931","obj":"T94548"},{"id":"R50313","pred":"arg2Of","subj":"T82190","obj":"T94548"},{"id":"R39618","pred":"arg1Of","subj":"T82190","obj":"T9564"},{"id":"R26497","pred":"arg1Of","subj":"T1931","obj":"T51998"},{"id":"R13764","pred":"arg2Of","subj":"T19375","obj":"T51998"},{"id":"R81075","pred":"arg1Of","subj":"T51998","obj":"T48884"},{"id":"R51585","pred":"arg2Of","subj":"T46091","obj":"T48884"},{"id":"R73778","pred":"arg1Of","subj":"T46091","obj":"T84416"},{"id":"R53908","pred":"arg1Of","subj":"T51998","obj":"T44026"},{"id":"R52362","pred":"arg2Of","subj":"T19745","obj":"T44026"},{"id":"R18993","pred":"arg1Of","subj":"T19745","obj":"T66697"},{"id":"R89736","pred":"arg2Of","subj":"T47496","obj":"T66697"},{"id":"R79769","pred":"arg1Of","subj":"T47496","obj":"T66659"},{"id":"R19666","pred":"arg1Of","subj":"T47496","obj":"T22981"},{"id":"R93374","pred":"arg1Of","subj":"T51998","obj":"T18117"},{"id":"R50127","pred":"arg1Of","subj":"T86256","obj":"T90160"},{"id":"R3485","pred":"arg1Of","subj":"T19375","obj":"T86256"},{"id":"R2351","pred":"arg1Of","subj":"T19375","obj":"T89702"},{"id":"R91193","pred":"arg1Of","subj":"T1931","obj":"T19375"},{"id":"R80199","pred":"arg1Of","subj":"T19375","obj":"T58982"},{"id":"R45246","pred":"arg2Of","subj":"T17546","obj":"T58982"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T85","span":{"begin":0,"end":6},"obj":"Body_part"},{"id":"T86","span":{"begin":346,"end":349},"obj":"Body_part"},{"id":"T87","span":{"begin":398,"end":409},"obj":"Body_part"},{"id":"T88","span":{"begin":533,"end":540},"obj":"Body_part"},{"id":"T89","span":{"begin":608,"end":615},"obj":"Body_part"}],"attributes":[{"id":"A89","pred":"fma_id","subj":"T89","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A87","pred":"fma_id","subj":"T87","obj":"http://purl.org/sig/ont/fma/fma82740"},{"id":"A85","pred":"fma_id","subj":"T85","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A88","pred":"fma_id","subj":"T88","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A86","pred":"fma_id","subj":"T86","obj":"http://purl.org/sig/ont/fma/fma67095"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T68","span":{"begin":145,"end":153},"obj":"Disease"},{"id":"T69","span":{"begin":205,"end":209},"obj":"Disease"},{"id":"T70","span":{"begin":316,"end":320},"obj":"Disease"},{"id":"T71","span":{"begin":442,"end":446},"obj":"Disease"},{"id":"T72","span":{"begin":623,"end":627},"obj":"Disease"},{"id":"T73","span":{"begin":796,"end":804},"obj":"Disease"}],"attributes":[{"id":"A72","pred":"mondo_id","subj":"T72","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A69","pred":"mondo_id","subj":"T69","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A70","pred":"mondo_id","subj":"T70","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A71","pred":"mondo_id","subj":"T71","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A68","pred":"mondo_id","subj":"T68","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A73","pred":"mondo_id","subj":"T73","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"LitCovid-sentences","denotations":[{"id":"T98","span":{"begin":0,"end":176},"obj":"Sentence"},{"id":"T99","span":{"begin":177,"end":257},"obj":"Sentence"},{"id":"T100","span":{"begin":258,"end":345},"obj":"Sentence"},{"id":"T101","span":{"begin":346,"end":511},"obj":"Sentence"},{"id":"T102","span":{"begin":512,"end":689},"obj":"Sentence"},{"id":"T103","span":{"begin":690,"end":843},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}

{"project":"2_test","denotations":[{"id":"32413736-16195424-48112970","span":{"begin":253,"end":255},"obj":"16195424"},{"id":"T82223","span":{"begin":253,"end":255},"obj":"16195424"}],"text":"Genome sequencing of a fecal bat sample, Rp3, could detect an isolate of coronaviruses, which was almost identical to the causative agent of the SARS-CoV outbreak of 2002–2003. Hence, it attained the name SARS-like coronavirus isolate Rp3 (SL-CoV Rp3) [12]. The bronchoalveolar lavage fluid (BALF) of a patient with SARS contained the 2019-nCoV. RNA sequencing could reveal about 90% similarity in nucleotides of the novel coronavirus and of SARS-like coronavirus that had previously related to bats [13], [14]. In particular, the S protein of the 2019-nCoV has a high sequence identity of 80–98% with the S protein of bat SARS-like CoVs, such as SARSr-CoV ZXC21 S, ZC45 S, and RaTG13 [3]. Moreover, in phylogenomic trees, branches for the 2019-nCoV are of greater length than those for the 2003 SARS-CoV, and therefore more favorable to bats."}