Table 3  Gene Ontology terms identified by Blast2GO analysis for contigs significantly upregulated at 25° (FDR 0.1, P < 0.01, >2-fold change)
GO Category  GO ID  Name  GO ID  Name  # Contigs
Biological Process  GO:0071840  Cellular component organization or biogenesis  GO:0016043  Cellular component organization  124
GO:0007005  Mitochondrion organization  18
GO:0006996  Organelle organization  50
GO:0009987  Cellular process  GO:0007154  Cell communication  11
GO:0007049  Cell cycle  87
GO:0008219  Cell death  129
GO:0019725  Cellular homeostasis  34
GO:0006464  Cellular protein modification process  175
GO:0007010  Cytoskeleton organization  85
GO:0007165  Signal transduction  337
GO:0006412  Translation  27
GO:0032502  Developmental process  GO:0009653  Anatomical structure morphogenesis  202
GO:0030154  Cell differentiation  152
GO:0009790  Embryo development  87
GO:0007275  Multicellular organismal development  315
GO:0040007  Growth  GO:0016049  Cell growth  21
GO:0008152  Metabolic process  GO:0009058  Biosynthetic process  155
GO:0005975  Carbohydrate metabolic process  27
GO:0009056  Catabolic process  170
GO:0006259  DNA metabolic process  43
GO:0006091  Generation of precursor metabolites and energy  11
GO:0006629  Lipid metabolic process  68
GO:0006139  Nucleobase-containing compound metabolic process  127
GO:0044238  Primary metabolic process  6
GO:0019538  Protein metabolic process  216
GO:0019748  Secondary metabolic process  6
GO:0051704  Multi-organism process  GO:0044403  Symbiosis, encompassing mutualism through parasitism  20
GO:0016032  Viral process  20
GO:0050789  Regulation of biological process  GO:0040029  Regulation of gene expression, epigenetic  4
GO:0000003  Reproduction    91
GO:0050896  Response to stimulus  GO:0007610  Behavior  33
GO:0009628  Response to abiotic stimulus  51
GO:0009607  Response to biotic stimulus  83
GO:0009719  Response to endogenous stimulus  46
GO:0009605  Response to external stimulus  100
GO:0006950  Response to stress  237
GO:0044699  Single-organism process  GO:0008283  Cell proliferation  91
GO:0008037  Cell recognition  26
GO:0007267  Cell–cell signaling  18
GO:0006810  Transport  GO:0006811  Ion transport  52
GO:0015031  Protein transport  66
Molecular Function  GO:0016209  Antioxidant activity    7
GO:0005488  Binding  GO:0003779  Actin binding  34
GO:0005509  Calcium ion binding  51
GO:0030246  Carbohydrate binding  11
GO:0003682  Chromatin binding  22
GO:0008092  Cytoskeletal protein binding  20
GO:0003677  DNA binding  142
GO:1901363  Heterocyclic compound binding  1
GO:0008289  Lipid binding  33
GO:0003676  Nucleic acid binding  48
GO:0000166  Nucleotide binding  262
GO:0097159  Organic cyclic compound binding  1
GO:0005515  Protein binding  498
GO:0005102  Receptor binding  83
GO:0003723  RNA binding  42
GO:0008135  Translation factor activity, nucleic acid binding  5
GO:0003824  Catalytic activity  GO:0016787  Hydrolase activity  98
GO:0016301  Kinase activity  15
GO:0003774  Motor activity  2
GO:0004518  Nuclease activity  6
GO:0008233  Peptidase activity  46
GO:0004721  Phosphoprotein phosphatase activity  26
GO:0004672  Protein kinase activity  58
GO:0016740  Transferase activity  89
GO:0009055  Electron carrier activity    19
GO:0030234  Enzyme regulator activity    66
GO:0060089  Molecular transducer activity  GO:0004871  Signal transducer activity  13
GO:0001071  Nucleic acid binding transcription factor activity  GO:0003700  Sequence-specific DNA binding transcription factor activity  95
GO:0004872  Receptor activity    43
GO:0005198  Structural molecule activity    10
GO:0005215  Transporter activity  GO:0005216  Ion channel activity  6
Cellular Component  GO:0030313  Cell envelope    1
GO:0071944  Cell periphery  GO:0030312  External encapsulating structure  1
GO:0005886  Plasma membrane  134
GO:0005737  Cytoplasm  GO:0016023  Cytoplasmic membrane-bounded vesicle  68
GO:0005829  Cytosol  134
GO:0005811  Lipid particle  9
GO:0005576  Extracellular region  GO:0005615  Extracellular space  38
GO:0005578  Proteinaceous extracellular matrix  22
GO:0043226  Organelle  GO:0005694  Chromosome  37
GO:0005929  Cilium  4
GO:0005856  Cytoskeleton  82
GO:0005783  Endoplasmic reticulum  115
GO:0005768  Endosome  19
GO:0072546  ER membrane protein complex  1
GO:0005794  Golgi apparatus  48
GO:0005764  Lysosome  6
GO:0005815  Microtubule organizing center  32
GO:0005739  Mitochondrion  78
GO:0000228  Nuclear chromosome  20
GO:0005635  Nuclear envelope  14
GO:0005730  Nucleolus  86
GO:0005654  Nucleoplasm  166
GO:0005634  Nucleus  233
GO:0005777  Peroxisome  3
GO:0005840  Ribosome  8
GO:0005773  Vacuole  5
GO:0043234  Protein complex    290
The three GO categories, Biological Process, Molecular Function, and Cellular Component, are presented along with GO terms of children and number of contigs assigned each term.