Z. tritici Z. pseudotritici Z. ardabiliae Z. brevis Family No. DNA Amount (kb) % of Genome Family No. DNA Amount (kb) % of Genome Family No. DNA Amount (kb) % of Genome Family No. DNA Amount (kb) % of Genome Class I (retrotransposons) LTR RLC 12 1017 2.56 6 90 0.23 5 232 0.62 7 827 2.08 RLG 14 2649 6.67 17 2906 7.50 16 1074 2.88 18 3616 9.09 LINE RII 4 737 1.86 0 0 0.00 3 76 0.20 4 547 1.38 RIL 2 747 1.88 0 0 0.00 1 32 0.09 0 0 0.00 RIX 1 5 0.01 1 83 0.22 1 67 0.18 1 193 0.48 DIRS RYN 1 23 0.06 0 0 0.00 0 0 0.00 0 0 0.00 SINE RSX 1 1 0.00 0 0 0.00 0 0 0.00 0 0 0.00 TRIM RLX-TRIM 4 35 0.09 0 0 0.00 0 0 0.00 1 4 0.01 Sub-total class I 39 5214 13.14 24 3080 7.94 26 1481 3.97 31 5186 13.04 Class II (DNA transposons) TIR DTT 14 246 0.62 3 51 0.13 4 29 0.08 9 254 0.64 DTA 7 150 0.38 1 35 0.09 1 4 0.01 5 175 0.44 DTH 10 184 0.46 0 0 0.00 0 0 0.00 11 292 0.74 DTM 7 145 0.36 1 44 0.11 0 0 0.00 4 213 0.54 DTX 6 364 0.92 6 432 1.11 5 76 0.20 3 315 0.79 Unknown DXX 2 40 0.10 0 0 0.00 0 0 0.00 0 0 0.00 Crypton DYX 1 6 0.02 0 0 0.00 0 0 0.00 0 0 0.00 Helitron DHH 4 470 1.18 7 357 0.92 1 39 0.10 5 391 0.98 Maverick DMM 0 0 0.00 2 476 1.23 0 0 0.00 0 0 0.00 MITE DTX-MITE 11 48 0.12 1 2 0.01 1 5 0.01 3 11 0.03 Sub-total class II 62 1653 4.17 21 1399 3.61 12 153 0.41 40 1652 4.15 Uncategorized repeats NoCat NoCat 10 516 1.30 60 1518 3.92 79 1303 3.49 93 2634 6.62 Total 111 7383 18.60 105 5997 15.47 117 2937 7.87 164 9472 23.87